PI0027201 (gene) Melon (PI 482460) v1

Overview


Name	PI0027201
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr10: 4373908 .. 4374193 (-)
RNA-Seq Expression	PI0027201
Synteny	PI0027201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGTTCGGTTAATTTTCGGGGCTTTTCCCTGTCTCCTGAATATCAAACCATGTGAGTCAGCTTCAGTTGCATTTTTGTACATAAGAAATATGATGCTGTCTTTTTTCCACCATCTTGATTGCAGGGGTCTCTTTTTGTGTTGGGTTGTCAATGACAATGGGGGAGGAAGAAGCTCAAAACACCTTCCATCTTTCCAATGTAAATGTAATATTTATGATTATGTATTGATTTGGATTTTGGAGGTATTGCTGCGGCTTTCCCATTCTGGTCAATGGGTGTAA

mRNA sequence

ATGTTTGGTTCGGTTAATTTTCGGGGCTTTTCCCTGTCTCCTGAATATCAAACCATGGGTCTCTTTTTGTGTTGGGTTGTCAATGACAATGGGGGAGGAAGAAGCTCAAAACACCTTCCATCTTTCCAATGTAAATGTAATATTTATGATTATGTATTGATTTGGATTTTGGAGGTATTGCTGCGGCTTTCCCATTCTGGTCAATGGGTGTAA

Coding sequence (CDS)

ATGTTTGGTTCGGTTAATTTTCGGGGCTTTTCCCTGTCTCCTGAATATCAAACCATGGGTCTCTTTTTGTGTTGGGTTGTCAATGACAATGGGGGAGGAAGAAGCTCAAAACACCTTCCATCTTTCCAATGTAAATGTAATATTTATGATTATGTATTGATTTGGATTTTGGAGGTATTGCTGCGGCTTTCCCATTCTGGTCAATGGGTGTAA

Protein sequence

MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPSFQCKCNIYDYVLIWILEVLLRLSHSGQWV

Homology

[Close]

BLAST of PI0027201 vs. ExPASy TrEMBL
Match: A0A0A0KLH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077770 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPSFQCKCNIYDYVLIWILEVL 60
          MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPS QCKCNIYDYVLIWILEVL
Sbjct: 1  MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPSLQCKCNIYDYVLIWILEVL 60

Query: 61 LRLSHSGQWV 71
          LR+SHSGQWV
Sbjct: 61 LRISHSGQWV 70

[Close]

BLAST of PI0027201 vs. NCBI nr
Match: KGN49709.1 (hypothetical protein Csa_018459 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPSFQCKCNIYDYVLIWILEVL 60
          MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPS QCKCNIYDYVLIWILEVL
Sbjct: 1  MFGSVNFRGFSLSPEYQTMGLFLCWVVNDNGGGRSSKHLPSLQCKCNIYDYVLIWILEVL 60

Query: 61 LRLSHSGQWV 71
          LR+SHSGQWV
Sbjct: 61 LRISHSGQWV 70

The following BLAST results are available for this feature:

BLAST of PI0027201 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLH1	1.3e-34	97.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077770 PE=4 SV=1	[more]

BLAST of PI0027201 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49709.1	2.7e-34	97.14	hypothetical protein Csa_018459 [Cucumis sativus]	[more]

BLAST of PI0027201 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027201.1	PI0027201.1	mRNA