PI0027156 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACCGCGTCCATCCCACCGCCGATTCACCCCGTCCGAGCACCTCTTCCACCGTCTCCGACACCACTAAACCTCCCTCTCCACCTCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATTTACCGCGTTCCTCCTCCCGAAAACGCTCACCGCTTCAAACTCTACACTCGCCAAAACCACCGCCACAACCGCTGCCGCTCCTGTCTCTTCTGGCTCCTCGGCATCCTCACCGTCCTCATCATCCTTCTAGGCATCACCGTCGCCGTTTTCTACTTAATCGTTCGCCCTAAATCACCTAACTACTCGATCGACGCCATTTCCATTTCCGGACTCAACTTAACATCCTCCTCCGCGATCTCGCCTGTATTCAATCTGACTGTTCGAGCGGATAATCCGAATAAGAAGATCGGAATCTATTACTTAACAGGTAGCTCAGTTGGAATCTATTTCTCTAACGAGAAACTTTCCGAGGGTGTTTTGCCTGATTTCTTTCAGCCTTCGAAGAATGTCAGTGTGTTTAGAATTTTTGTGAGAGGATCTGGTGTTAATTTGTCAAGTAGGGCGAAGAATGAGTTGATTGATTCAGTGAAACAGAGGGCGGTGGTGTTGAAGGTGGAGATTGGAGTTCCGATTAAGGTGAAAATTGGAGCGGTGAAGAGTTGGAAGATGAAAGTGAAGGTGAATTGTGACGTGACGGTGGATCAATTGACGGCGGCGGCGAAGATTGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG ATGGCCGACCGCGTCCATCCCACCGCCGATTCACCCCGTCCGAGCACCTCTTCCACCGTCTCCGACACCACTAAACCTCCCTCTCCACCTCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATTTACCGCGTTCCTCCTCCCGAAAACGCTCACCGCTTCAAACTCTACACTCGCCAAAACCACCGCCACAACCGCTGCCGCTCCTCCTTCGAAGAATGTCAGTGTGTTTAGAATTTTTGTGAGAGGATCTGGTGTTAATTTGTCAAGTAGGGCGAAGAATGAGTTGATTGATTCAGTGAAACAGAGGGCGGTGGTGTTGAAGGTGGAGATTGGAGTTCCGATTAAGGTGAAAATTGGAGCGGTGAAGAGTTGGAAGATGAAAGTGAAGGTGAATTGTGACGTGACGGTGGATCAATTGACGGCGGCGGCGAAGATTGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG ATGGCCGACCGCGTCCATCCCACCGCCGATTCACCCCGTCCGAGCACCTCTTCCACCGTCTCCGACACCACTAAACCTCCCTCTCCACCTCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATTTACCGCGTTCCTCCTCCCGAAAACGCTCACCGCTTCAAACTCTACACTCGCCAAAACCACCGCCACAACCGCTGCCGCTCCTCCTTCGAAGAATGTCAGTGTGTTTAGAATTTTTGTGAGAGGATCTGGTGTTAATTTGTCAAGTAGGGCGAAGAATGAGTTGATTGATTCAGTGAAACAGAGGGCGGTGGTGTTGAAGGTGGAGATTGGAGTTCCGATTAAGGTGAAAATTGGAGCGGTGAAGAGTTGGAAGATGAAAGTGAAGGTGAATTGTGACGTGACGGTGGATCAATTGACGGCGGCGGCGAAGATTGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTKFTAFLLPKTLTASNSTLAKTTATTAAAPPSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW Homology
BLAST of PI0027156 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.9e-16 Identity = 38/89 (42.70%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of PI0027156 vs. ExPASy TrEMBL
Match: A0A5A7UIE7 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00310 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 114/261 (43.68%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of PI0027156 vs. ExPASy TrEMBL
Match: A0A1S3BRG5 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103492469 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 114/261 (43.68%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of PI0027156 vs. ExPASy TrEMBL
Match: A0A0A0LX01 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G601000 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33 Identity = 116/258 (44.96%), Postives = 130/258 (50.39%), Query Frame = 0
BLAST of PI0027156 vs. ExPASy TrEMBL
Match: A0A6J1HX04 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111467424 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26 Identity = 63/89 (70.79%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of PI0027156 vs. ExPASy TrEMBL
Match: A0A6J1F2Z0 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111439401 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 8.6e-26 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of PI0027156 vs. NCBI nr
Match: XP_008451090.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0055663.1 protein YLS9-like [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 3.6e-34 Identity = 114/261 (43.68%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of PI0027156 vs. NCBI nr
Match: XP_004144152.2 (LOW QUALITY PROTEIN: NDR1/HIN1-like protein 13 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 3.9e-33 Identity = 116/258 (44.96%), Postives = 130/258 (50.39%), Query Frame = 0
BLAST of PI0027156 vs. NCBI nr
Match: KAE8653483.1 (hypothetical protein Csa_007184 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 8.8e-33 Identity = 77/89 (86.52%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of PI0027156 vs. NCBI nr
Match: XP_038879841.1 (NDR1/HIN1-like protein 13 [Benincasa hispida]) HSP 1 Score: 128.6 bits (322), Expect = 4.7e-26 Identity = 111/258 (43.02%), Postives = 125/258 (48.45%), Query Frame = 0
BLAST of PI0027156 vs. NCBI nr
Match: XP_023531236.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-25 Identity = 63/89 (70.79%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of PI0027156 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 85.5 bits (210), Expect = 4.2e-17 Identity = 38/89 (42.70%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of PI0027156 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 85.5 bits (210), Expect = 4.2e-17 Identity = 38/89 (42.70%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of PI0027156 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 68.2 bits (165), Expect = 7.0e-12 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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