PI0027125 (gene) Melon (PI 482460) v1

Overview
NamePI0027125
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMitochondrial transcription termination factor family protein
Locationchr03: 25957235 .. 25965683 (-)
RNA-Seq ExpressionPI0027125
SyntenyPI0027125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTCAATTCCTCAAATTTCAGGTACAATTCCTCCAATTTCATCTCCATAATCCATCTGCATTTCTTTCAAGAATTTTACTTTTGCTGGAATCCTTGTTTCGTTTTGTATTACGTACCACCTTTTCTTAATTGGACTTGCTTAACTGTTTCTTTTCGCATTCGGTTTTAATCGGAACTCAATTCAATTAAGATAATATTCATATATAGGCCCCCTTGAGCTTCTGATCCTATTGTGAACAACCAATTCAACTTTGTACATATATACTGCCGATACTACCTTATTGAAGATGATATGATATGATTCACTTCTGTTGGATGAGAAAGACATTGGTTGAAATTTTTGCTGAATGATATAGTAAAAAACGTAGTGTCTGCATTGTTTGGAAGATCATGTCAGGTTGTGCAGCAACTTCTTTTTAATACGCTGGAGTATTCGCTATTAGTTAAACAATATCTTGACCATGGGATAAACCCTAGATCGATTATCTTCTCTTGTATGAACGTAAGTAATAAGAAATAAGCAAGCTAAAATAATAATAATAATAATAATAATCAAGCATAGTAGTAAAGAAAACAATTCTAACATGAAAATTCTCCTTAAGGTGTAGAGTAAAATACCGTGGATTGAAGTAAAAAATCTCCATAATGGGCTACAATGAGTTTTCCCAAGTCACATGAGTAATTCTGGCTCTTTTTGTGAATGACCCATGAATATAATTGAACTCATTCCCAAAAGTCAATGACTGCATATCAGATCTCCTTTAAGAGGCTTCTGAGGGTCTCAGATTCTCAACCACTTTTGCTTCACTTTTCATGTACTCATGTTTTTTTTTCCATGAATCTTTTGAAAGCTCTATTTTGAGCATGGTAACCAACCTTACCTGTGGTAACTGAATTTGAAGAGATCCTAGTTAGCCTCCTGTCTGCACAATGCTGTCTATTATTTTATGACAGCATTGTTACTTCGGAAGTCAAAACTTCGGACTCTTGAAAGATTTCACTATAGCCTTCAGTTAAACATATTTTTGCTGGAGCATCTATTGTTATATCTATCTGGAGGCATACTTGTGAAGCTTTAAATTCTTGTTGAGTCCTTTCTATATACTCAGTACTTATTGGATTGTCCATTATTCCAATTTCTGGTGACTTTCTTGATTAAAGTCTTTTTCTTCTCCTGAACTCAGAGCTTGGATAAAGCTGACCATCTAAATAGACTAAAACATGATTTTGGGAGGAAATTTGTCTGCTACCTCGTTGGTCAACTTTAATTGGTAGTACGGCTATTTCAAAAATACTTATGTTGGAGGTAATTATAACTTGGAAACTCTGTCTTTGATAAAACACATCTTTGCATTGACTCGCTTGGAGCTTCTCCATATTTCAGTGGAACTCATTATTGGTTCAATAAAATGTTTTAACAAAATTTAGAAATTCTTTGATGCTCAAATGTTGTAAAATCAGGTGGGGTGTCTCGTGACATAAGTCAACGTGCACGTAAAGCTGGCCTAGACACTCACATGTATCAAAAAAAGAATTGGAGGAATTTTTTGTGTGAGATGGGCCATGCTTTATGAATGGTAAATGTGTTATGATAATCACATTTTTTATAGTTGGTACAGCTGGTTCTAACCAAACTTCTTAATATGGTACAGGGATGCTAGGAAAGTCGTTGGCGTCCCCCATATCAACTGTTGATTCTGCTACTCATTTCTGCTGGTCTACTGTGAGTAGCAAATTTTGCCTCTTATCATTAAATGTTATGGGAATAACACAAAATAATAGAGAAAATATTAGGTGCAAATACAGTACCACGTTGGGAAGAGAGAAATCCATGATGTACAAGTGAGAACGGTTATCTTTAATGATATGAGGTCTTTTAGGTGATTTCAACAATCACTCCATTGAGGAGATAAGTGAAGGTTCAGTACGTCTTTTTCTTTGGCAGGAATGCAATGAGAAATAAGGAAGTAATTTTTTTTTTTTTTTTTTGAAATGGAGACAAGCTTCTTTATTAGTAACAAACTCAAAGTACAAGAGAATTATACAATGAGAGCAATAGAGAAGCCTAGAAAGAGAGAGGAAAGATTGGATCAGTAGGTGCACCCGGACATCTCAACTAGGTTGACACCCCCTTAGCACCTTCATCATTTCCAAAAATAAAAGAAATGAAACTAAGGTTGTGAAAAGACAGAAAATAACAATACAAACCGGCCATTCTGGATAAAATTCAAAGCTGGAGAATAAGAAAATATAGGGAAAGATACAAAGCAAAACTAAACAAAGTAAAGCCAAACATTCTGGAGAATAAAGATCCGAATTCTCTCTTAAGCTGGAGGGTGGATGAAAGCACTCCAGTTGAGACAAATATCCTGAATTCAATAATCTTTGAATTCAGCACTCAAGGAACACCAAGATGCTGCGTTTCTTTTTTACCTGTTAATGGTATAAACCCAACCCTTTTTTATTGTGAAAAATGTGCTGGTTGCGTTCAAACCAAATCTCCGCCAGCAACGCTTTTACCAAATTAATTCATATTAGAAGTGGTTTCTTTGATAAAAAGGGCCCCCTCGGTAGCAGGAACACATTGGAGCTTAGAGATCCATCAAAGACCCAAACTGTTTTGAACATAGAAAAAATGCTATACCAGAATTTAGATGAGTAGGGGCAGAAAATGAATAAGTGTATTAGGTGCTCACATCCTTTAAACAAAGAGGACACACCGATGGCAACAAACATTTATTGGAAAGTTTCCTTTGCATGATCTTGGAGCAATTGAGATGACCAACTAGAATATTTATTCTCCTTGGGCTGCTGCTTTTCCATAGGGCTTTAAAACAAGCTTTTTCCAAAGGGGAAGATGGAGAGAGGTGAGTCGATAGAGATTTTACTGAGAAGTGTCCTGAGGCCTCTACAAGCTCTCCTATACTCCAGTTCTGTCAATCTTCTCGAGGATAGAAGGAGTAATAATAGTTGGAATTCTTGGATTTCTTCATCTTTCAGCAATCTTCGGAACACTATGGACCAAGAATTTGTGACACAATCCCAGTAGGCAGCAACTGAGCCATTTGGCTGCAAGGCTATTCTGAAAAGTTTTGGATATTTTATTTTTAATAAGGAAGTAATTGTTACATCATTTAATTCATACTCCTATTGTTTTGCATTGCTCAAACAATGATTTTATAATCTCTCTTTTTAGGATTTCATAATTTATTCTTAATTCTCAACACAGCGCTGCATTGCCACAGCCATATCATATGCTGTATGTTCAAATGTGAGTTTCTCCTATCATCCTGCAAAGCATACGATAAAGGGTGTGAGAAGACAAAATCCCTATCCTAGGAAGTGGGAAATCTGTTCAACTACTCAAGTTGAGAGCTTAATATTAAGTGATGAGGATAAGAAGAAATGGGAAGCTTGTCGGCAAGTTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTTGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAATTGTAAATGATATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTAAAGAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTGAAACCCAACGTACAATTGTTGGCAAAGAGTGGGGAATTCAAGGCAAATCCCTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGCTATAATGTTGATTGTAAAGGAGACTGCATAGCGAAATGCACCAGATGCTGGGTTCGATTCTAGGTACATTTTCTTTTCAGAATTTCTTATGTTGGAATAATGATATTGAACTATAGCCACAACACTGTATTCATGCATATTAAATTGTTAGAATTAAGAATATAAACGGTCAAACCTGGAACAACAATTCAATGTTCAGAGAAAGATCTTCAACTAAACACATAAGAGTTCTAAATTGTGAAATGGGAAGCAAGATAATTGAATATGTTTAGCGTATTGGAGACTATTACTCTTACTTTCTATTTATAAACTCTTCACTAGACCCCATTAATTCTAGTAAGAGTTATTGAGTATCTACTTAATAAAACTCTGTACTCCATTATAGTTTATGAACCTATTTAATTATAGGTTACTTCAATTAACCATTTAAATAGCCAACTAATATAAGTATACCAAACACATTTTGACCATCAGAATAAAATTAATTACACGTTCTGACTTCATAGGCATGAAGCTACATATTTCAAGTCTTGCTAAATCATGTCTGAATTACCAATTTTCAGTTATTTGGACCATTGTTTTCATGTTCATAAATGCGTAACCTGTTCCCCTCTTTCTGTTCTCTCTCATTTGTATATTCTTTTAACATAAAATTATCGAAGTTTGATCTGATGCCTTGAACAGTTAAGAGCATATTTGGAAATAGAGAGCCACTGTCTTTGTTTTGTTGACTTTTGCTTCCATTCGTTTATGGAAAAATAGCTTCCATACTTTAAACGTTTCCTAAAGAGTTAGTTTGGGGAAAGCAATTCTCCAATTCTTGTGAACTAAAAAACAAACAAGTTCTTATACAATAGTAGCTTATAACATATGTTAATTAAATTTTTGTTATTGTACATGAAGTTGTTTCTTCTTTTACAAAACAACTCAACACACAAGTTATTTTTCTAGTTCTTATGCAACTTCTAATTGAGTTTGATATGAGTAACAGCTTGGTGCATAAAGTTTGCGTAGTAGATATAAATTATAATATTCTTTATACCCTTTGTGCTTTTCTTTTTTTAATGGAAAAGTAATATTAGAATAAGAATATTCCTTTTACATATATGTTTAATAAAGAACCAAATGAAACTGTTCAATTCCGCGTTTATGCACTAAAAACATGATATCAACCCATCCAAAGTTTGTGCAAAAGTGTATGCACTAGTTTTATATTTTGTATTCAATTCTGCGTTTATGCACTAATTTCATATTTTGTATTATATTTTTTGTATTATATTTTGTATTTCGAGCATTAGTCTCTTTTCATTTCATCAATAAAAAAAAATTGTTAAAAAAAAAGTAAAAAAAAATAGTTTGTGCAAAAGGAACATCTTAATGACTTCAGGAAGTAGCATCTTCTTTTCTCCCTGTCTCTAAATGGGCTCCCTAAATGCAAAAAAAATCTTGGTTTATCTTTTTGCTTTTACACATACCCAATGTATGTTTTCTCTTCAATAAAAGCATATTCTAAATCAATTTTCTTTACTTTTTTTCAATTATTTGTAATATCATTCTCTTTTGCTTCATCATCATCTTGTTCTTTTATTTCTTTTGCAGAGCTATAATGGTTCTCAATCTATGGTTGAATATTCCCAAAAGATAGGTATGCTTCTAATTAAATTTATATTAATTGAATATTTTGTTAAAGAATATTCAGAAGTATGTGTGAATATTAAAAAGACCCCAAGGAAAAATGGGAGTATAGATGCAGCAAGGCTTCAAGAAGCTGAATATTTGCAAAAGAGCTAGGGAGATGGCTGCCAAAGATCACTTAAATATATTATCAATTAGAAAATTGGACCTTATAAAAAGAAATACAACACTGATTTTTATTCCAATTGTAAGCAACACAAGCCACTTAGATATAGTACAACGACAGAGGTGGGAAAATCAACATAATCAAAAAGAGAGAGAATGCAAGAGAAACCCTTGGCTTCAATATATTGATAGGTAAATAACACCAATCCTATATAGTTGGCCTGGGAGGAAAACTCTTGCAAACTACACTCACCCACGTCAAATTATCATCAATAACAAAAGGAATCCTTCTAGAAGAATTCCATAACATAATGAATTTTGAGAAGGAAATCAAGATACCCAGAACCCAATTAAGCCTAATGGGTTGTCTTAATTGGAAGATTCAAACAACCACAAACATCTTGATCAATAACACATTTATATGCCAGATGAGCCATGCTCACTTTGGCATTTTTATACACATTAATAGTATATAAACATAAATGGAAAATACAAAGAATTAAATGACCTCCCATATATAAAAGAAAATAGTGTAGAAGTTGGGTTGGAAGAGTAGAGTGGAAATTAGGGGCACTTGGGCTTATTGCCATGGGTCTTGAGGCGAGCATAGCAAGGGCAAGCTTGGTGGTTGCCGTAAGTGCCGGGTGGGACGCAGTGACACCGACTGCAGCAAGTCCCACAAGCACGCATACATATCTTCTTTCTGAACACTTTGCTGCATCTCCTTGAACATTCACTTTTGCAATCTACCCCAAATCAATCCAACCCAACCCGATCGTTAATTTCACTCCAAATTTTGTGTTACAAGTTTCTTTATATAAAAAAAGGAAAAAAAAATTGTTCTGTTACATGTTTAGTTTTTAAAAGCACCGTTGGGTAAATTATATTTTATAAGTTTATGTTTGTTTTCTCCTAAATTGCATAAGTCTATTTTCAGATTTCTGGAAGAACCACGTGAAATTTTAGTCAAATTGTATGAAGGAAAAGAAGTTTTTGAAAACATGGTCCCTTTTTGTAATTTTTTGTTTTTGTTTTTTTGAAAATTAAGCGTCCACTCCTAATTTTCTTGTTGTGTTATCTAGTTTATACTAAGGTTTTTTAAAAATAAAGCCAAATTTTGAAAATTAAAATTATTAGGCCCTGTTTGATTACCATTTGGTTTTTGAAAAATAAGCCTACAAATTAAAAGTTTAATGTTCTATTAGACACAAAATTCACTTTATAAAAATTTGTTAATGTAGAGGATTTAGAAATCTATAATTTAGAGATATATTAATTGAAAGTTTAAAGACTTATTTGACCGTTTTAAAATTTAAAAACCTATTCTAACACCACGTAAAAGTCTAAAGAATAAACTTGAATTCTCTATACATATTATTACTATTATTAGATTTTATGGCAACTTACTGATTTTTGGCTGATAGTGATACTTTTTGCTGAGTGCTACTGTATTGGTCCCTTCATCTACCTGAATCCAATATAATGTCAGTATTCATATGATTGTTATAATTATTTTCATTCACCTAACATTTTTGTTTTCCTAATAATTTAGGACATGTTATCATGAGTTCAGTTTAATTGGTAATGGTTGAGAACTAGGCTTAGAAATCACATATATTCTTCTTTAACTCTTCGTTTATTCAAACTACGTTAAACGTATATATGCTCAACATATTTCTTATATATTAAGTTGAAGTTGTATTTCGTACCTTGATACTCATGCCATGTTAAACTCTACTCAACCAAATTAATTTCGGTGATTAAGAGTTATTATATTCTGTGAGGTATAATAATTTATAGATTATAATTGTTTGTGTTTGGGGTACAAACTGTTTTAGTCTCGTATAATAATCTGTGCTTGAGGTTTATATTATTTTTATTTGGGTAAATATAGTAAACACGGAAACAAATAGTTAGTATTGTAGCAAATAGGGATTTGAAATATTAATGCTATAGTTAATTGTGAAATATGATATATAGTTTGAAACAATAACTATTATAATTAGAGTCCCGAATATGGAATGAGCTAGTCCACTCCACGAACTACAAAAGACTAGAATAACAAGTTGGAGTTGTTAAGTAGCGGTTCTTTCCAACAATTTTTAGCTATAAGCCTCAACAATAATCTCAAAATCTCAATTCAATAAATTGCAAAACTTAGAAAAGGTAATGATGGAAAGGTAAAAAGTAAAGCAAGAGATATAATAATGAGAACACTCACATTAGTGATAGCCTCTGAAAA

mRNA sequence

ACTTTCAATTCCTCAAATTTCAGAGCTTGGATAAAGCTGACCATCTAAATAGACTAAAACATGATTTTGGGAGGAAATTTGTCTGCTACCTCGTTGGTCAACTTTAATTGGTAGTACGGCTATTTCAAAAATACTTATGTTGGAGGTGGGGTGTCTCGTGACATAAGTCAACGTGCACGTAAAGCTGGCCTAGACACTCACATGTATCAAAAAAAGAATTGGAGGAATTTTTTGTGTGAGATGGGCCATGCTTTATGAATGGGATGCTAGGAAAGTCGTTGGCGTCCCCCATATCAACTGTTGATTCTGCTACTCATTTCTGCTGGTCTACTCGCTGCATTGCCACAGCCATATCATATGCTGTATGTTCAAATGTGAGTTTCTCCTATCATCCTGCAAAGCATACGATAAAGGGTGTGAGAAGACAAAATCCCTATCCTAGGAAGTGGGAAATCTGTTCAACTACTCAAGTTGAGAGCTTAATATTAAGTGATGAGGATAAGAAGAAATGGGAAGCTTGTCGGCAAGTTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTTGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAATTGTAAATGATATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTAAAGAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTGAAACCCAACGTACAATTGTTGGCAAAGAGTGGGGAATTCAAGGCAAATCCCTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGCTATAATGTTGATTGTAAAGGAGACTGCATAGCGAAATGCACCAGATGCTGGGTTCGATTCTAGAGCTATAATGGTTCTCAATCTATGGTTGAATATTCCCAAAAGATAGGTATGCTTCTAATTAAATTTATATTAATTGAATATTTTGTTAAAGAATATTCAGAAGTATGTGTGAATATTAAAAAGACCCCAAGGAAAAATGGGAGTATAGATGCAGCAAGGCTTCAAGAAGCTGAATATTTGCAAAAGAGCTAGGGAGATGGCTGCCAAAGATCACTTAAATATATTATCAATTAGAAAATTGGACCTTATAAAAAGAAATACAACACTGATTTTTATTCCAATTGTAAGCAACACAAGCCACTTAGATATAGTACAACGACAGAGGTGGGAAAATCAACATAATCAAAAAGAGAGAGAATGCAAGAGAAACCCTTGGCTTCAATATATTGATAGGTAAATAACACCAATCCTATATAGTTGGCCTGGGAGGAAAACTCTTGCAAACTACACTCACCCACGTCAAATTATCATCAATAACAAAAGGAATCCTTCTAGAAGAATTCCATAACATAATGAATTTTGAGAAGGAAATCAAGATACCCAGAACCCAATTAAGCCTAATGGGTTGTCTTAATTGGAAGATTCAAACAACCACAAACATCTTGATCAATAACACATTTATATGCCAGATGAGCCATGCTCACTTTGGCATTTTTATACACATTAATAGTATATAAACATAAATGGAAAATACAAAGAATTAAATGACCTCCCATATATAAAAGAAAATAGTGTAGAAGTTGGGTTGGAAGAGTAGAGTGGAAATTAGGGGCACTTGGGCTTATTGCCATGGGTCTTGAGGCGAGCATAGCAAGGGCAAGCTTGGTGGTTGCCGTAAGTGCCGGGTGGGACGCAGTGACACCGACTGCAGCAAGTCCCACAAGCACGCATACATATCTTCTTTCTGAACACTTTGCTGCATCTCCTTGAACATTCACTTTTGCAATCTACCCCAAATCAATCCAACCCAACCCGATCGTTAATTTCACTCCAAATTTTGTGTTACAAGTTTCTTTATATAAAAAAAGGAAAAAAAAATTGTTCTGTTACATGTTTAGTTTTTAAAAGCACCGTTGGGTAAATTATATTTTATAAGTTTATGTTTGTTTTCTCCTAAATTGCATAAGTCTATTTTCAGATTTCTGGAAGAACCACGTGAAATTTTAGTCAAATTGTATGAAGGAAAAGAAGTTTTTGAAAACATGGTCCCTTTTTGTAATTTTTTGTTTTTGTTTTTTTGAAAATTAAGCGTCCACTCCTAATTTTCTTGTTGTGTTATCTAGTTTATACTAAGGTTTTTTAAAAATAAAGCCAAATTTTGAAAATTAAAATTATTAGGCCCTGTTTGATTACCATTTGGTTTTTGAAAAATAAGCCTACAAATTAAAAGTTTAATGTTCTATTAGACACAAAATTCACTTTATAAAAATTTGTTAATGTAGAGGATTTAGAAATCTATAATTTAGAGATATATTAATTGAAAGTTTAAAGACTTATTTGACCGTTTTAAAATTTAAAAACCTATTCTAACACCACGTAAAAGTCTAAAGAATAAACTTGAATTCTCTATACATATTATTACTATTATTAGATTTTATGGCAACTTACTGATTTTTGGCTGATAGTGATACTTTTTGCTGAGTGCTACTGTATTGGTCCCTTCATCTACCTGAATCCAATATAATGTCAGTATTCATATGATTGTTATAATTATTTTCATTCACCTAACATTTTTGTTTTCCTAATAATTTAGGACATGTTATCATGAGTTCAGTTTAATTGGTAATGGTTGAGAACTAGGCTTAGAAATCACATATATTCTTCTTTAACTCTTCGTTTATTCAAACTACGTTAAACGTATATATGCTCAACATATTTCTTATATATTAAGTTGAAGTTGTATTTCGTACCTTGATACTCATGCCATGTTAAACTCTACTCAACCAAATTAATTTCGGTGATTAAGAGTTATTATATTCTGTGAGGTATAATAATTTATAGATTATAATTGTTTGTGTTTGGGGTACAAACTGTTTTAGTCTCGTATAATAATCTGTGCTTGAGGTTTATATTATTTTTATTTGGGTAAATATAGTAAACACGGAAACAAATAGTTAGTATTGTAGCAAATAGGGATTTGAAATATTAATGCTATAGTTAATTGTGAAATATGATATATAGTTTGAAACAATAACTATTATAATTAGAGTCCCGAATATGGAATGAGCTAGTCCACTCCACGAACTACAAAAGACTAGAATAACAAGTTGGAGTTGTTAAGTAGCGGTTCTTTCCAACAATTTTTAGCTATAAGCCTCAACAATAATCTCAAAATCTCAATTCAATAAATTGCAAAACTTAGAAAAGGTAATGATGGAAAGGTAAAAAGTAAAGCAAGAGATATAATAATGAGAACACTCACATTAGTGATAGCCTCTGAAAA

Coding sequence (CDS)

ATGAATGGGATGCTAGGAAAGTCGTTGGCGTCCCCCATATCAACTGTTGATTCTGCTACTCATTTCTGCTGGTCTACTCGCTGCATTGCCACAGCCATATCATATGCTGTATGTTCAAATGTGAGTTTCTCCTATCATCCTGCAAAGCATACGATAAAGGGTGTGAGAAGACAAAATCCCTATCCTAGGAAGTGGGAAATCTGTTCAACTACTCAAGTTGAGAGCTTAATATTAAGTGATGAGGATAAGAAGAAATGGGAAGCTTGTCGGCAAGTTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTTGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAATTGTAAATGATATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTAAAGAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTGAAACCCAACGTACAATTGTTGGCAAAGAGTGGGGAATTCAAGGCAAATCCCTAA

Protein sequence

MNGMLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPRKWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDRKKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAKSGEFKANP
Homology
[Close]
BLAST of PI0027125 vs. ExPASy TrEMBL
Match: A0A1S3B2X0 (uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.1e-88
Identity = 163/175 (93.14%), Postives = 167/175 (95.43%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCSNVSFSYHPAKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWE+CS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KK+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. ExPASy TrEMBL
Match: A0A5A7T0X2 (Mitochondrial transcription termination factor family protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001190 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.1e-88
Identity = 163/175 (93.14%), Postives = 167/175 (95.43%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCSNVSFSYHPAKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWE+CS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KK+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. ExPASy TrEMBL
Match: A0A0A0LQN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85
Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCS+VSFS H AKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWEICS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           +K+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. ExPASy TrEMBL
Match: A0A6J1FK31 (uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC111444935 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 148/175 (84.57%), Postives = 155/175 (88.57%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSL SPISTVDS T  C+ST CI TA S AVCSNVSFSY PAK+ I  VRRQ+PYPR
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWEI ST QVESL+LSDEDKK WEACRQ LS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEIHSTAQVESLVLSDEDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KKEVPNI+ VN+ILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEK 175

[Close]
BLAST of PI0027125 vs. ExPASy TrEMBL
Match: A0A6J1JTP6 (uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 147/175 (84.00%), Postives = 156/175 (89.14%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSL SPISTVDS T  C+ST CI TA S AVCSNVSFSY PAK+ I  VRRQ+PYPR
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSGAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWEI ST+QVESL+LSD+DKK WEACRQ LS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEIHSTSQVESLVLSDDDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KKEVPNI+ VN+ILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEK 175

[Close]
BLAST of PI0027125 vs. NCBI nr
Match: KAA0037010.1 (Mitochondrial transcription termination factor family protein isoform 2 [Cucumis melo var. makuwa] >TYK06641.1 Mitochondrial transcription termination factor family protein isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 8.5e-88
Identity = 163/175 (93.14%), Postives = 167/175 (95.43%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCSNVSFSYHPAKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWE+CS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KK+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. NCBI nr
Match: XP_008441218.1 (PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441219.1 PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441220.1 PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 8.5e-88
Identity = 163/175 (93.14%), Postives = 167/175 (95.43%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCSNVSFSYHPAKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWE+CS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KK+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. NCBI nr
Match: XP_011649898.1 (uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_011649900.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_031737008.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_031737009.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >KAE8652244.1 hypothetical protein Csa_021907 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 7.2e-87
Identity = 163/178 (91.57%), Postives = 168/178 (94.38%), Query Frame = 0 

Query: 1   MNGMLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNP 60
           MNGMLGKSLASPIST+DSAT FC STRC ATAIS AVCS+VSFS H AKHTIKGVRRQNP
Sbjct: 1   MNGMLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNP 60

Query: 61  YPRKWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWG 120
           YPRKWEICS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWG
Sbjct: 61  YPRKWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWG 120

Query: 121 EDRKKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           EDR+K+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 EDREKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 178

[Close]
BLAST of PI0027125 vs. NCBI nr
Match: XP_004138649.1 (uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus] >XP_031737011.1 uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 6.8e-85
Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSLASPIST+DSAT FC STRC ATAIS AVCS+VSFS H AKHTIKGVRRQNPYPR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWEICS+TQVESLILSDEDKK WEACRQ LSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           +K+VPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. NCBI nr
Match: XP_038885056.1 (uncharacterized protein LOC120075592 [Benincasa hispida] >XP_038885057.1 uncharacterized protein LOC120075592 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 7.7e-81
Identity = 155/175 (88.57%), Postives = 157/175 (89.71%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNVSFSYHPAKHTIKGVRRQNPYPR 63
           MLGKSL SPIST+DSAT FC STR IATAIS A  SNVSFSYHPAKH IK VRRQ PYP 
Sbjct: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60

Query: 64  KWEICSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123
           KWEICSTTQVESL LSDED+K WEACRQ LSVFSFSVEEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120

Query: 124 KKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLLAK 179
           KKEVPNIE VNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELK NVQLL K
Sbjct: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDK 175

[Close]
BLAST of PI0027125 vs. TAIR 10
Match: AT4G09620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 4   MLGKSLASPISTVDSATHFCWSTRCIATAISYAVCSNV-SFSYHPAKHTIKGVRRQNPYP 63
           M+G SLASP++T+ SA  F  S      A+     +NV     + + H + G  R + Y 
Sbjct: 3   MVGNSLASPLATLGSAKCFRHS------AVDLVTYTNVLPLRLNSSYHGVNGGVRTSSYS 62

Query: 64  R-KWEI-CSTTQVESLILSDEDKKKWEACRQVLSVFSFSVEEQDKMLGKAFGHIHSPYWG 123
           R KW + CSTTQVE+   S+ED   WE C++ LS F FSVEE+DK+LGKAFGHIHSPYW 
Sbjct: 63  RSKWIVFCSTTQVET---SNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWT 122

Query: 124 EDRKKEVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLL 177
           E+R KE P +E +N ILE+LR+LGLS++DL K++KKFPEVLGC+LE+E+KPN+ +L
Sbjct: 123 EERVKENPKVETLNQILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGIL 169

[Close]
BLAST of PI0027125 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.7e-04
Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 132 IVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKPNVQLL 177
           I+  ++EYL  LG+     ++L++K P +LG  L+  +KPNVQ+L
Sbjct: 286 IIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL 330

The following BLAST results are available for this feature:
BLAST of PI0027125 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B2X04.1e-8893.14uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=... [more]
A0A5A7T0X24.1e-8893.14Mitochondrial transcription termination factor family protein isoform 2 OS=Cucum... [more]
A0A0A0LQN83.3e-8591.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1[more]
A0A6J1FK311.1e-7784.57uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC1114449... [more]
A0A6J1JTP62.5e-7784.00uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650... [more]
BLAST of PI0027125 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037010.18.5e-8893.14Mitochondrial transcription termination factor family protein isoform 2 [Cucumis... [more]
XP_008441218.18.5e-8893.14PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441219.1 P... [more]
XP_011649898.17.2e-8791.57uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_011649900.... [more]
XP_004138649.16.8e-8591.43uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus] >XP_031737011.... [more]
XP_038885056.17.7e-8188.57uncharacterized protein LOC120075592 [Benincasa hispida] >XP_038885057.1 unchara... [more]
BLAST of PI0027125 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G09620.11.4e-4352.84Mitochondrial transcription termination factor family protein [more]
AT4G02990.13.7e-0440.00Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 137..180
e-value: 7.2E-7
score: 28.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 3..181
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 66..185
e-value: 3.4E-9
score: 38.2
NoneNo IPR availablePANTHERPTHR13068:SF192MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 3..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027125.1PI0027125.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding