Homology
BLAST of PI0027124 vs. ExPASy Swiss-Prot
Match:
P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 0
Query: 8 PKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSK 67
P+ ++F LK +S P+LK+PDF++ F + DA + +GAVLSQ GHP+ Y S L++
Sbjct: 481 PEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNE 540
Query: 68 SRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRARWMSYI 127
+ST E+EL A+V A K + HYLL R F + ++H L +L K + RW +
Sbjct: 541 HEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKL 600
Query: 128 QRFDFVIRHQTNKENKVADALSR 151
FDF I++ KEN VADALSR
Sbjct: 601 SEFDFDIKYIKGKENCVADALSR 623
BLAST of PI0027124 vs. ExPASy Swiss-Prot
Match:
P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0
Query: 13 SFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLW 72
+F LK + P+L+LPDF + F + DA + +GAVLSQ GHPI + S L+ +
Sbjct: 485 AFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNY 544
Query: 73 STYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRARWMSYIQRFDF 132
S E+EL A+V A K + HYLL R+FL+ ++H L++L + K RW + + F
Sbjct: 545 SAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQF 604
Query: 133 VIRHQTNKENKVADALSR 151
I + KEN VADALSR
Sbjct: 605 KIDYIKGKENSVADALSR 622
BLAST of PI0027124 vs. ExPASy Swiss-Prot
Match:
Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 4 FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPI 63
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735
Query: 64 EYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--REFLLLTEHFSL--KYLQSQK 123
Y+S K+SK++ +S ++E+ A++++LK W HYL S F +LT+H +L + +
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795
Query: 124 TISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR 151
++ ARW ++Q F+F I ++ N +ADALSR
Sbjct: 796 PENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
BLAST of PI0027124 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 4 FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPI 63
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735
Query: 64 EYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--REFLLLTEHFSL--KYLQSQK 123
Y+S K+SK++ +S ++E+ A++++LK W HYL S F +LT+H +L + +
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795
Query: 124 TISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR 151
++ ARW ++Q F+F I ++ N +ADALSR
Sbjct: 796 PENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
BLAST of PI0027124 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 4 FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPI 63
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735
Query: 64 EYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--REFLLLTEHFSL--KYLQSQK 123
Y+S K+SK++ +S ++E+ A++++LK W HYL S F +LT+H +L + +
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795
Query: 124 TISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR 151
++ ARW ++Q F+F I ++ N +ADALSR
Sbjct: 796 PENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
BLAST of PI0027124 vs. ExPASy TrEMBL
Match:
A0A5D3BBL1 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00420 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 151/244 (61.89%), Postives = 190/244 (77.87%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYF
Sbjct: 228 GLFEW--------LVMPVELSNAPSTFMRLMNQPFEVAVNASRTNTGAVLSQSSHPIEYF 287
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLLT+HFSLKYLQ+QK+I++M A
Sbjct: 288 SEKLSQLRQMWSTYKQEMYALIRALKQWEHYLLSKEFLLLTDHFSLKYLQAQKSINKMHA 347
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F I
Sbjct: 348 RWISFLRRFDFIIKHKSGKENKVANALSRKHSLLSTLSSKLIAFKHLPNLYEDDANFNRI 407
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W K +H+ AG+FHI+DGFLFK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+
Sbjct: 408 WYKRAHHLEAGEFHIVDGFLFKGEKLCIPHTSLREALLKEAHSGGLAGHFGQDKTLEILS 463
Query: 242 KRYY 246
+YY
Sbjct: 468 SKYY 463
BLAST of PI0027124 vs. ExPASy TrEMBL
Match:
A0A5A7SLE0 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00090 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 151/244 (61.89%), Postives = 190/244 (77.87%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYF
Sbjct: 228 GLFEW--------LVMPVELSNAPSTFMRLMNQPFEVAVNASRTNTGAVLSQSSHPIEYF 287
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLLT+HFSLKYLQ+QK+I++M A
Sbjct: 288 SEKLSQLRQMWSTYKQEMYALIRALKQWEHYLLSKEFLLLTDHFSLKYLQAQKSINKMHA 347
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F I
Sbjct: 348 RWISFLRRFDFIIKHKSGKENKVANALSRKHSLLSTLSSKLIAFKHLPNLYEDDANFNRI 407
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W K +H+ AG+FHI+DGFLFK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+
Sbjct: 408 WYKRAHHLEAGEFHIVDGFLFKGEKLCIPHTSLREALLKEAHSGGLAGHFGQDKTLEILS 463
Query: 242 KRYY 246
+YY
Sbjct: 468 SKYY 463
BLAST of PI0027124 vs. ExPASy TrEMBL
Match:
A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)
HSP 1 Score: 295.8 bits (756), Expect = 1.6e-76
Identity = 145/183 (79.23%), Postives = 159/183 (86.89%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
GAF+WGPKQQ+SFNLLK L NI VLKLPDF QAF VAVD CG G+GAVLSQQ HPIEYF
Sbjct: 935 GAFEWGPKQQDSFNLLKESLRNILVLKLPDFFQAFEVAVDTCGTGIGAVLSQQEHPIEYF 994
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SE+LSKSRQ WSTYEQELYALVRALKQWEHYLLSREF+LLT+HFSLKYL SQK+IS M A
Sbjct: 995 SEELSKSRQSWSTYEQELYALVRALKQWEHYLLSREFILLTDHFSLKYLHSQKSISMMHA 1054
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+SY QRFDFVI+HQ KENKVADALSRK +LL L EI +FNH+ ELY+KD DFE+I
Sbjct: 1055 RWISYTQRFDFVIKHQAGKENKVADALSRKSNLLFILSSEITIFNHITELYKKDRDFESI 1114
Query: 182 WEK 185
WEK
Sbjct: 1115 WEK 1117
BLAST of PI0027124 vs. ExPASy TrEMBL
Match:
A0A6D2HS27 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS4046 PE=4 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 1.1e-75
Identity = 138/244 (56.56%), Postives = 180/244 (73.77%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F WG +Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ P+ +F
Sbjct: 229 GKFFWGSEQDKSFALIKEKLCTAPVLALPDFDKVFQVECDASGVGIGAVLSQEKRPVAFF 288
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L T+H +LK+L SQK I++M A
Sbjct: 289 SEKLSEARQRWSTYDQEFYAVFRALRQWEHYLIQREFILFTDHQALKFLHSQKVINKMHA 348
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +
Sbjct: 349 RWVSFLQKFPFIIQHKSGTLNKVADALSRRASLLITLAHEIVGFELLKELYESDAEFKEL 408
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W+KC + DFHI DGFLFK D LCIP +SLRE+LI++ H GGL+G + KT L
Sbjct: 409 WDKCNGKHPSADFHIRDGFLFKGDRLCIPCSSLREKLIRDLHGGGLSGHLGRDKTIASLE 468
Query: 242 KRYY 246
+RYY
Sbjct: 469 ERYY 472
BLAST of PI0027124 vs. ExPASy TrEMBL
Match:
A0A6D2HLB5 (Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS2198 PE=4 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 1.1e-75
Identity = 138/244 (56.56%), Postives = 180/244 (73.77%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F WG +Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ P+ +F
Sbjct: 855 GKFFWGSEQDKSFALIKEKLCTAPVLALPDFDKVFQVECDASGVGIGAVLSQEKRPVAFF 914
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L T+H +LK+L SQK I++M A
Sbjct: 915 SEKLSEARQRWSTYDQEFYAVFRALRQWEHYLIQREFILFTDHQALKFLHSQKVINKMHA 974
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +
Sbjct: 975 RWVSFLQKFPFIIQHKSGTLNKVADALSRRASLLITLAHEIVGFELLKELYESDAEFKEL 1034
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W+KC + DFHI DGFLFK D LCIP +SLRE+LI++ H GGL+G + KT L
Sbjct: 1035 WDKCNGKHPSADFHIRDGFLFKGDRLCIPCSSLREKLIRDLHGGGLSGHLGRDKTIASLE 1094
Query: 242 KRYY 246
+RYY
Sbjct: 1095 ERYY 1098
BLAST of PI0027124 vs. NCBI nr
Match:
KAE8652794.1 (hypothetical protein Csa_022828 [Cucumis sativus])
HSP 1 Score: 323.9 bits (829), Expect = 1.2e-84
Identity = 153/244 (62.70%), Postives = 189/244 (77.46%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G+F+WG +++SF LK L++ PVLKLP+F + F V VDA G+G+G VLSQ+GHP+EYF
Sbjct: 140 GSFQWGQVEEDSFCKLKLALASPPVLKLPNFDKPFEVTVDASGLGIGVVLSQEGHPLEYF 199
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS RQ WSTYEQELYALVRALKQWEHYLL+ F+LLT+HFSLK+L SQKTISRM A
Sbjct: 200 SEKLSTYRQNWSTYEQELYALVRALKQWEHYLLANTFILLTDHFSLKFLNSQKTISRMHA 259
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+ ++QRFDFVI+H + K NKVADALSRKG LL TL +II F+HL LY D DF +I
Sbjct: 260 RWLQFLQRFDFVIKHTSGKSNKVADALSRKGILLTTLQSQIIAFDHLHTLYPTDIDFRSI 319
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
WE C NH D+HI++ FLFK D+LC+P TSLRE +IKE HS GLAG F + KT +
Sbjct: 320 WENCSNHKPCKDYHIVNSFLFKGDVLCVPHTSLREAIIKETHSRGLAGHFGRDKTLATII 379
Query: 242 KRYY 246
+++
Sbjct: 380 SKFF 383
BLAST of PI0027124 vs. NCBI nr
Match:
TYJ96334.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 311.2 bits (796), Expect = 7.8e-81
Identity = 151/244 (61.89%), Postives = 190/244 (77.87%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYF
Sbjct: 228 GLFEW--------LVMPVELSNAPSTFMRLMNQPFEVAVNASRTNTGAVLSQSSHPIEYF 287
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLLT+HFSLKYLQ+QK+I++M A
Sbjct: 288 SEKLSQLRQMWSTYKQEMYALIRALKQWEHYLLSKEFLLLTDHFSLKYLQAQKSINKMHA 347
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F I
Sbjct: 348 RWISFLRRFDFIIKHKSGKENKVANALSRKHSLLSTLSSKLIAFKHLPNLYEDDANFNRI 407
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W K +H+ AG+FHI+DGFLFK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+
Sbjct: 408 WYKRAHHLEAGEFHIVDGFLFKGEKLCIPHTSLREALLKEAHSGGLAGHFGQDKTLEILS 463
Query: 242 KRYY 246
+YY
Sbjct: 468 SKYY 463
BLAST of PI0027124 vs. NCBI nr
Match:
KAA0026079.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 311.2 bits (796), Expect = 7.8e-81
Identity = 151/244 (61.89%), Postives = 190/244 (77.87%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYF
Sbjct: 228 GLFEW--------LVMPVELSNAPSTFMRLMNQPFEVAVNASRTNTGAVLSQSSHPIEYF 287
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLLT+HFSLKYLQ+QK+I++M A
Sbjct: 288 SEKLSQLRQMWSTYKQEMYALIRALKQWEHYLLSKEFLLLTDHFSLKYLQAQKSINKMHA 347
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F I
Sbjct: 348 RWISFLRRFDFIIKHKSGKENKVANALSRKHSLLSTLSSKLIAFKHLPNLYEDDANFNRI 407
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W K +H+ AG+FHI+DGFLFK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+
Sbjct: 408 WYKRAHHLEAGEFHIVDGFLFKGEKLCIPHTSLREALLKEAHSGGLAGHFGQDKTLEILS 463
Query: 242 KRYY 246
+YY
Sbjct: 468 SKYY 463
BLAST of PI0027124 vs. NCBI nr
Match:
KAA0054966.1 (transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK22755.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 295.8 bits (756), Expect = 3.4e-76
Identity = 145/183 (79.23%), Postives = 159/183 (86.89%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
GAF+WGPKQQ+SFNLLK L NI VLKLPDF QAF VAVD CG G+GAVLSQQ HPIEYF
Sbjct: 935 GAFEWGPKQQDSFNLLKESLRNILVLKLPDFFQAFEVAVDTCGTGIGAVLSQQEHPIEYF 994
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SE+LSKSRQ WSTYEQELYALVRALKQWEHYLLSREF+LLT+HFSLKYL SQK+IS M A
Sbjct: 995 SEELSKSRQSWSTYEQELYALVRALKQWEHYLLSREFILLTDHFSLKYLHSQKSISMMHA 1054
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+SY QRFDFVI+HQ KENKVADALSRK +LL L EI +FNH+ ELY+KD DFE+I
Sbjct: 1055 RWISYTQRFDFVIKHQAGKENKVADALSRKSNLLFILSSEITIFNHITELYKKDRDFESI 1114
Query: 182 WEK 185
WEK
Sbjct: 1115 WEK 1117
BLAST of PI0027124 vs. NCBI nr
Match:
KAG7588770.1 (Integrase catalytic core [Arabidopsis suecica])
HSP 1 Score: 295.0 bits (754), Expect = 5.8e-76
Identity = 139/244 (56.97%), Postives = 181/244 (74.18%), Query Frame = 0
Query: 2 GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYF 61
G F WGP+Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ PI +F
Sbjct: 882 GKFHWGPEQDESFALIKEKLCTAPVLALPDFDKIFQVECDASGVGIGAVLSQEKRPIAFF 941
Query: 62 SEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQSQKTISRMRA 121
SEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L T+H +LK+L SQK I++M A
Sbjct: 942 SEKLSEARQKWSTYDQEFYAVFRALRQWEHYLVQREFILFTDHQALKFLHSQKVINKMHA 1001
Query: 122 RWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENI 181
RW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +
Sbjct: 1002 RWVSFLQKFPFIIQHKSGALNKVADALSRRASLLTTLAHEIVGFEFLKELYETDAEFKEL 1061
Query: 182 WEKCINHVYAGDFHILDGFLFKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILT 241
W+KC + DFHI +G+LFK D LCIP +SLRE+LI+E H GGL+G + KT L
Sbjct: 1062 WDKCNGKHPSTDFHIREGYLFKGDRLCIPCSSLREKLIRELHGGGLSGHLGRDKTIASLE 1121
Query: 242 KRYY 246
+RYY
Sbjct: 1122 ERYY 1125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P04323 | 1.4e-24 | 42.66 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... | [more] |
P20825 | 2.2e-22 | 41.30 | Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... | [more] |
Q9UR07 | 5.2e-19 | 35.90 | Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
P0CT41 | 5.2e-19 | 35.90 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
P0CT34 | 5.2e-19 | 35.90 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BBL1 | 3.8e-81 | 61.89 | Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7SLE0 | 3.8e-81 | 61.89 | Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5D3DGR0 | 1.6e-76 | 79.23 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
A0A6D2HS27 | 1.1e-75 | 56.56 | Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS4046 P... | [more] |
A0A6D2HLB5 | 1.1e-75 | 56.56 | Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS2198 PE=... | [more] |
Match Name | E-value | Identity | Description | |
KAE8652794.1 | 1.2e-84 | 62.70 | hypothetical protein Csa_022828 [Cucumis sativus] | [more] |
TYJ96334.1 | 7.8e-81 | 61.89 | Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0026079.1 | 7.8e-81 | 61.89 | Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0054966.1 | 3.4e-76 | 79.23 | transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK2... | [more] |
KAG7588770.1 | 5.8e-76 | 56.97 | Integrase catalytic core [Arabidopsis suecica] | [more] |
Match Name | E-value | Identity | Description | |