PI0027090 (gene) Melon (PI 482460) v1

Overview


Name	PI0027090
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 1
Location	chr11: 7715052 .. 7718817 (-)
RNA-Seq Expression	PI0027090
Synteny	PI0027090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGAAATGTGAATACAGAATATTTCGCGGCGCGAACATGAATTCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCAGCAAGTTTCAATCGGAGACGGAGAGATTGAGCACCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCGGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAATTCCGGTTAGTTGCTCTCTTTCTGTAATTCCTTAACTCTCTCTTACGCCTCCATAGCCTTTACATTCGATTACTTTCAAATTTCTTAAAATTAAACCCTAACTCCTCGTTCTGAATCATCCCGATAGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTTTCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAAACCGACCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGTTCCTTCTCATTTGGAAAGCAACTACTGAATTTCATGAAAACACTGCATTTTAGCTGTACATCTGAAATTGAATATGTAAATTCAGCATTGTTGCGAATCAAAGCCTGCTTAATCTTATACTGACTGAAGAGTTTAGCATTGTTATTGGAGTCCACCAATTCAGTCTTCCAGAACTCTTAAAATTTTCATCAATTAAATGATGTTGAGATGGTATTTGAGCTTGACGGATCACATTGGGGTGCTGTCGATAATGGATATGATACTTCTTAGTAACTACATTTGATGTTGAGTCTAGATGTTTAGCCATGGCTTCCATGCTGCCCATCTGTTTCTATTAAGAGTTTGGGGCCTATTCGACATGATCTGTTGTGTTTGTTTTTGGTGTATTGTTAGAGCTGTTTTGTTATTTGTATTCTTAGTTTTGGTTAAAGCGTTGTCTATTAAGTTCCTGAAACTTAGGTTAGGTCTAGTTTGCATTTGTTTTTTGCTAGTCTGCTACTTAAGACAACTTAAGCTATTTATTATTCATTTTAAAATTATAAGTGGGGTGTAACAAAGGGATTTGAGGGAATGAATTCAAATCATTGTGGCCATTTTTGAGGATTTAATACCCTACAATTTTCGTTGGCAACCAAATGTAGTAAAGCCAAATGATTGCCCCAAGAGAATAGTTGAGGTGCACTGAAGTTAGTATGGACAATGGACACTCATGGATGTCAAAAAGAAAAGAAAAAGATTTCGTTGGCCTTGCAATCCAGTCAGCACAACTCTTGGAAACAGTTTTGACTATGGAAGAAAAGGCTACTTTAGAAAACAACTTCTCAGCTATCATTTAGGTTTAGAAGATTTTGTTTTGTGTTTTGATGGTTTGCTTTCAATGACTTGTGCTTCGCTTTGCTGACACAAGGAGGTAGCTATAGACTTGGAACTTGGAAGAAATACCTTTTAAACTAGTACATTTTATGAACACACTAAGTATACAAGAGAAAAAGACTGCAAAAGTCTAAAATAAAACTAAACCTTAACTTCCATCTTTGTGATCACTGAATAAACATTTCTTATGATTCTGGAGCCTTGATGTTGTCTCATCATTTGAGAGTGAAATGAAAATGTATAGTGCACTGGGAAAGAAATAATCTCCTCTTTTTCCTTTTTCTTAAAAAAGGATAGAAATAATCTCTTGGGGGCACTTGGGGCAAAGAGTAGAGTTGTTTAGTCTTAGTAGTTGTTAAGTCTGGAGAGTCATTTAGCAGTGAGGCCCATAGTGACATAAATCAACAAGTCATGGAATTTATGTTTTGCTCACCATGAGTTTAAGAATTCTTTGGGCCAAACAAGGATTCTCCGCAACTCCTACTCGTTGGGCCAAACATGCCTTTATTTTTTTTAATGAGAATAACCACTTTCATTGAGAAAAATGAAATATACGGGCATACAAAAAACCAAACCCATAAAAGAAGAATGCTACCCACTACAAGAAGAGACTCCAACTATGCAAGATCAATCCTAAAGGATAATTACAAAAGGACTTAGAAATCGAAGGCCAGAGATAATCATGAAAACAAACGATGAACTAGAGCTCACTAGGGTCCCTCTCTAGACCCCTAAACACTCTTCTGTTTCTCTCATCCTACAAAACTCGTAACACGCACACACGCCGGAAAGCCAAAGAAACCGGCCTTTCTCCCTAAATGGCGGATGCATATAAAAAAATTCAATTTTTCTAGAGCTAAACTAACATGCCTTTATTGTTTTGTCAGATGCATATAAAAAATCTCAATTTTTCACAGGATTTTAGACAGTTTTAGCCGTGCTTGTGCACATTATTACTTGACCTTAACCTTTGTAAAACATTGAGCAACTTCGTATTTTGGATCTGCAGAACCTAAGAATGTGATTAGCTTTAACGCTTGAATCACTCAATAAGTTTCTTAGTTAAAGATTTGAACTAAAAGAAACCAGGTGCACATTGTTTTTTCACATACTCTTTCCTCCTTAAATTTTTTTTTTTTATGAAACAATTGCTTTCATTGAGAAGAAATGAAAGAATGCATGGCAAAAAAGAGAAAAAAAAGCCCACCAAAACAACCCAACTAAAGGGAGGGGTTCCAACTAAGGGAAATGGTTTTTAGAGTATAGTTACAAAAAAGTTTTGAAACCGAGCCAAAGGGACACGTGAAATCTTGCCAAAGACCAAACCTCACAAGGGTCCCTTTCCCTCCCTCTAAACATTCTAGCATTCCTCTTCCCCCAAATATCTCCTCCTTTAAAAGTTTTATGGATACCATAACAAGTGTTGAATAATGGGAGTAATATTTCATTAAGGAGAAATAACTCTACTTACTTGAATACATTACACAGAAGCCCTATTTATAGGGCATGATGTACAAATAACCAACTAAATCAGTTATAACAAATAACCAAAAGCTACAAAAAGTGCAACAGAATTTACAACTTATTTACAAAGTTTAATAGTGTTATCTACTGTTTTTTCTTAATACAGAACTAAGCACCGTTTCTTTCATTATAGCTTATCTTTTTTAATCAGTAATTGACAACCTCTTATGTAATCACCTTTTGGTGTTTGGGGTTCTTCCCTGATTTCATCGATCAATAGAAGATTTCTTTTACCAAAAAATAAAAAATAAAAAAATCATAATCTTGAAAAAGTAAGATAGGAAAGGCACTCTGATTTCCTTTCCTTCATGATTTCTTCATATTCCCCTTTGGGTTTCTTTCAGATCTTTTTCGTTCTAATATGTTATTCATACTAATTTGTTGTGTTTATTTTGTAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGAAATGCTTGTAGTCTGTAGAGTCGAGAAAAAGATCAATCCTTATCCTCTGCTTTAAGTTCCGCTGAATCTCTGCCCCCATACATGGTTTGATAAGTTTAAAGGGTGCAGCATGCCCAGATGAAAACTCGTAGTAGCTTAGAACACCACAGTCACCTGGCGTCTGCTACCTCGCTAACTGTATAAAAATGATTTTTCGACTTTGTTTTTTATGTTCACTGATTTGTTTTTCATTAGCACAGTGGATGTTACCATTTTGCCCATTTATTGCTTATGTAAACTGTAGTCTTCTTTGTACAATTATTAGCAGCTGCCATGTAATAATAATTTCTACATTCTTTCAA

mRNA sequence

GCGTGAAATGTGAATACAGAATATTTCGCGGCGCGAACATGAATTCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCAGCAAGTTTCAATCGGAGACGGAGAGATTGAGCACCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCGGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAATTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTTTCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAAACCGACCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGAAATGCTTGTAGTCTGTAGAGTCGAGAAAAAGATCAATCCTTATCCTCTGCTTTAAGTTCCGCTGAATCTCTGCCCCCATACATGGTTTGATAAGTTTAAAGGGTGCAGCATGCCCAGATGAAAACTCGTAGTAGCTTAGAACACCACAGTCACCTGGCGTCTGCTACCTCGCTAACTGTATAAAAATGATTTTTCGACTTTGTTTTTTATGTTCACTGATTTGTTTTTCATTAGCACAGTGGATGTTACCATTTTGCCCATTTATTGCTTATGTAAACTGTAGTCTTCTTTGTACAATTATTAGCAGCTGCCATGTAATAATAATTTCTACATTCTTTCAA

Coding sequence (CDS)

ATGAATTCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCAGCAAGTTTCAATCGGAGACGGAGAGATTGAGCACCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCGGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAATTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTTTCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAAACCGACCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGA

Protein sequence

MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

Homology

[Close]

BLAST of PI0027090 vs. ExPASy Swiss-Prot
Match: O22929 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-41
Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 24  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCK 143
           +E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCK 138

Query: 144 SITTAIHNIYQD 156
            IT AI NI++D
Sbjct: 139 KITAAIRNIHED 150

[Close]

BLAST of PI0027090 vs. ExPASy Swiss-Prot
Match: Q0VFD8 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-20
Identity = 46/116 (39.66%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 39  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++
Sbjct: 2   LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L T  A+F KQT QW++     N A+KEIGD ENW ++I+ D + I TA+  +Y+
Sbjct: 62  TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117

[Close]

BLAST of PI0027090 vs. ExPASy Swiss-Prot
Match: Q2NKW0 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 42/116 (36.21%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 39  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

[Close]

BLAST of PI0027090 vs. ExPASy Swiss-Prot
Match: P78537 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 42/116 (36.21%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 39  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

[Close]

BLAST of PI0027090 vs. ExPASy Swiss-Prot
Match: O55102 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Mus musculus OX=10090 GN=Bloc1s1 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 42/116 (36.21%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 39  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

[Close]

BLAST of PI0027090 vs. ExPASy TrEMBL
Match: A0A1S3CKJ9 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501869 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 146/155 (94.19%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. ExPASy TrEMBL
Match: A0A6J1G8I4 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111451801 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.4e-70
Identity = 141/155 (90.97%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           MNS SGQSR  LP   NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. ExPASy TrEMBL
Match: A0A6J1L4G4 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111499798 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           MNS SGQSR   P A NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHHPAARNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKALRVSDLLVDAVNGGVQGSFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. ExPASy TrEMBL
Match: A0A6J1D9F5 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018127 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.1e-65
Identity = 132/155 (85.16%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           M+S SG SRP LPVA NR   QSETERLS++ GGLEASLLQMV DHQ+ASLKLR++SEKA
Sbjct: 1   MDSPSGPSRPHLPVARNRGMLQSETERLSSEAGGLEASLLQMVHDHQFASLKLRQDSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLV AVNGGVQESFVNQKLIELEIRALA TI+RF KQTDQWL  THA
Sbjct: 61  KKDAIQKAVRVSDLLVHAVNGGVQESFVNQKLIELEIRALAATISRFMKQTDQWLTTTHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Sbjct: 121 LNTAIKEIGDFENWIKTIDFDCKSITAAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. ExPASy TrEMBL
Match: A0A5A7V238 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00400 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 121/150 (80.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIH 151
           LNTAVK  G  +  +  +  +  SI   +H
Sbjct: 121 LNTAVKHFGRIKAGLILLLTEEFSIVIGVH 150

[Close]

BLAST of PI0027090 vs. NCBI nr
Match: XP_011657181.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus] >KAE8647013.1 hypothetical protein Csa_016997 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74
Identity = 148/155 (95.48%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           M SSSGQSRPDLPV PNR KFQSETERL+ DVGGLEASLLQMV DHQYASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. NCBI nr
Match: XP_008463815.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 3.8e-73
Identity = 146/155 (94.19%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. NCBI nr
Match: XP_038900751.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 145/155 (93.55%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           MNSSSG SRPDLPVAPNR KFQSETE L+ +VGGLEASLLQMV DH YASLKLRENSEKA
Sbjct: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. NCBI nr
Match: XP_022948128.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata] >KAG7023932.1 Biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 141/155 (90.97%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           MNS SGQSR  LP   NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. NCBI nr
Match: XP_023534753.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 9.7e-69
Identity = 140/155 (90.32%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKA 60
           MNS SGQSR  LP   NR KFQSE ERLS DVGGLE SL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEDSLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of PI0027090 vs. TAIR 10
Match: AT2G30330.1 (GCN5L1 family protein )

HSP 1 Score: 168.3 bits (425), Expect = 4.8e-42
Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 24  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCK 143
           +E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCK 138

Query: 144 SITTAIHNIYQD 156
            IT AI NI++D
Sbjct: 139 KITAAIRNIHED 150

The following BLAST results are available for this feature:

BLAST of PI0027090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22929	6.8e-41	61.36	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis tha...	[more]
Q0VFD8	5.0e-20	39.66	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropica...	[more]
Q2NKW0	2.1e-18	36.21	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9...	[more]
P78537	2.1e-18	36.21	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX...	[more]
O55102	2.1e-18	36.21	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Mus musculus OX...	[more]

BLAST of PI0027090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKJ9	1.8e-73	94.19	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX...	[more]
A0A6J1G8I4	9.4e-70	90.97	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita mosch...	[more]
A0A6J1L4G4	2.3e-68	89.68	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucurbita maxim...	[more]
A0A6J1D9F5	4.1e-65	85.16	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Momordica chara...	[more]
A0A5A7V238	1.0e-55	80.67	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo va...	[more]

BLAST of PI0027090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657181.1	5.8e-74	95.48	biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumi...	[more]
XP_008463815.1	3.8e-73	94.19	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_038900751.1	1.4e-72	93.55	biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida...	[more]
XP_022948128.1	1.9e-69	90.97	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschat...	[more]
XP_023534753.1	9.7e-69	90.32	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo su...	[more]

BLAST of PI0027090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30330.1	4.8e-42	61.36	GCN5L1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PFAM	PF06320	GCN5L1	coord: 42..154 e-value: 3.6E-41 score: 139.9
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PANTHER	PTHR13073	BLOC-1 COMPLEX SUBUNIT 1	coord: 24..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027090.1	PI0027090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051641	cellular localization
cellular_component	GO:0031083	BLOC-1 complex