PI0026818 (gene) Melon (PI 482460) v1

Overview


Name	PI0026818
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	chr06: 13300380 .. 13301197 (+)
RNA-Seq Expression	PI0026818
Synteny	PI0026818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAAAACTCAATCCTCATCGATTTTAGAGCTTTTCCCTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTTCCACCTCCTTCTTCTCGCCGACTCCCAAACCTCCTCCCCTATATCGGTAGATCTTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGCATTCAACAATTATCGCCTCCCCCGCCCCCGCCACCGCCGCCTCCTCCTCCTTGTACCCCAATGGTGTCGTCTCGACCACCGCCTCCTAGGTTTATTTATACCACGTCGTCACCTGCACCACCACCTCCAAGGTTTACTTATACGACCGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGACGGGGAAGCGACCGGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTGGTAAGTGGTGAAAGGATGAATAGCCATATAAAGAAAATTAATGTGTTGAATTTGGTCTAATTACTTAAACAAATATTTACTCTTAGTTCATAAAGTATAAATATATATATTATATGATCTTAATTAGATGTTTATTTATTTACCTTTTTTCAACAAAATTTATTTAGTATTTTCTTTCAATATAATTTTATAGTTACATTTTAGTGTTGATAAGAATATTGAAGGTTACAAATTATTTGTGGTTCATATGTATTGTGATGTTGATGGATGCTTATAGAGACATTAATATATATGAAGATTTGTAAA

mRNA sequence

CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAAAACTCAATCCTCATCGATTTTAGAGCTTTTCCCTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTTCCACCTCCTTCTTCTCGCCGACTCCCAAACCTCCTCCCCTATATCGGTAGATCTTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGCATTCAACAATTATCGCCTCCCCCGCCCCCGCCACCGCCGCCTCCTCCTCCTTGTACCCCAATGGTGTCGTCTCGACCACCGCCTCCTAGGTTTATTTATACCACGTCGTCACCTGCACCACCACCTCCAAGGTTTACTTATACGACCGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGACGGGGAAGCGACCGGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTGGTAAGTGGTGAAAGGATGAATAGCCATATAAAGAAAATTAATGTGTTGAATTTGGTCTAATTACTTAAACAAATATTTACTCTTAGTTCATAAAGTATAAATATATATATTATATGATCTTAATTAGATGTTTATTTATTTACCTTTTTTCAACAAAATTTATTTAGTATTTTCTTTCAATATAATTTTATAGTTACATTTTAGTGTTGATAAGAATATTGAAGGTTACAAATTATTTGTGGTTCATATGTATTGTGATGTTGATGGATGCTTATAGAGACATTAATATATATGAAGATTTGTAAA

Coding sequence (CDS)

ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTTCCACCTCCTTCTTCTCGCCGACTCCCAAACCTCCTCCCCTATATCGGTAGATCTTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGCATTCAACAATTATCGCCTCCCCCGCCCCCGCCACCGCCGCCTCCTCCTCCTTGTACCCCAATGGTGTCGTCTCGACCACCGCCTCCTAGGTTTATTTATACCACGTCGTCACCTGCACCACCACCTCCAAGGTTTACTTATACGACCGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGACGGGGAAGCGACCGGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTGGTAAGTGGTGA

Protein sequence

MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

Homology

[Close]

BLAST of PI0026818 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68
Identity = 138/152 (90.79%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTTGKRPGMAAVVVALGCGALHLMGFGKW 151
           YFSGT   RPGMAAV VA+GCGALHLMGF KW
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of PI0026818 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 135/148 (91.22%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           M  SAAILLSFSFL  LLLLA SQTSSPIS+D QNPDAEIKCGSCPCSNPCIQQLS PPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-PPP 60

Query: 63  PPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 122
           PPPPPP PCTP VSSRPPPPRFIYT SSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG
Sbjct: 61  PPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 120

Query: 123 TTGKRPGMAAVVVALGCGALHLMGFGKW 151
           TTG RPGMAAVVVALGCGALHLMGF KW
Sbjct: 121 TTGTRPGMAAVVVALGCGALHLMGFSKW 147

[Close]

BLAST of PI0026818 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 106/148 (71.62%), Postives = 117/148 (79.05%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           MAPSAAI LS SFLF  L LA+SQ  SP  VD Q+P++EIKCGSCPCSNPC++Q    PP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSP--VDPQDPNSEIKCGSCPCSNPCVKQF---PP 60

Query: 63  PPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 122
           PPPPPPP C P +   PPPPRFIYT+ SP PPPPRF YTTGVPGNLY+IDANN WYYFSG
Sbjct: 61  PPPPPPPNCKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTGVPGNLYQIDANNRWYYFSG 120

Query: 123 TTGKRPGMAAVVVALGCGALHLMGFGKW 151
           TT      AA+VVALGCGAL+LM FGKW
Sbjct: 121 TTRNWSATAALVVALGCGALNLMAFGKW 142

[Close]

BLAST of PI0026818 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.1e-28
Identity = 87/150 (58.00%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCP-CSNPCIQQLSPPP 62
           MAPSAAI LS       LLL+  QTS PIS    +PD EI C S   CSNP +QQL P P
Sbjct: 1   MAPSAAIFLS-------LLLSFIQTSPPISASPLDPDTEINCDSTTLCSNPSVQQLQPSP 60

Query: 63  PPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFS 122
           P PPPP            PPPRF YTT S  PPP RF YTTGVP +LY+ D  N WYYFS
Sbjct: 61  PLPPPP-----------LPPPRFTYTTLSSPPPPLRFIYTTGVPSDLYQNDEKNRWYYFS 120

Query: 123 GTTGKRPGMAA-VVVALGCGALHLMGFGKW 151
           G  GK P MAA VVV L CGAL L+ FGKW
Sbjct: 121 GAVGKPPAMAALVVVGLACGALDLIVFGKW 132

[Close]

BLAST of PI0026818 vs. ExPASy TrEMBL
Match: A0A5N6QWV0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007840 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17
Identity = 67/154 (43.51%), Postives = 85/154 (55.19%), Query Frame = 0


Query: 4   APSAAILLSFSFLFHLLLLADS------QTSSPISVDLQNPDAEIKCGSCPCSNPCIQQL 63
           +P   IL+   FLF   + A +      QTS P+  +    D EIKCG+CPC NPC QQL
Sbjct: 9   SPHTLILILHLFLFISAITATNLPEKLDQTSVPLPQEA--ADTEIKCGTCPCVNPCAQQL 68

Query: 64  SPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVP--GNLYEIDANN 123
              PPPPPPPPPP  P  +     P   Y T + APPPPRF Y TGVP  G+LY  D  N
Sbjct: 69  ---PPPPPPPPPPAAPKFN-----PATTYCTPA-APPPPRFIYVTGVPAAGDLYVADPYN 128

Query: 124 SWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGK 150
           +W Y+SG       +   ++ +GCG L +M  G+
Sbjct: 129 TWVYYSGAGRPNVIVGLWLLLVGCGVLEMMVIGR 151

[Close]

BLAST of PI0026818 vs. NCBI nr
Match: XP_011651408.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 138/152 (90.79%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTTGKRPGMAAVVVALGCGALHLMGFGKW 151
           YFSGT   RPGMAAV VA+GCGALHLMGF KW
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of PI0026818 vs. NCBI nr
Match: KAE8650628.1 (hypothetical protein Csa_011452 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 9.7e-66
Identity = 136/149 (91.28%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTTGKRPGMAAVVVALGCGALHLMGF 148
           YFSGT   RPGMAAV VA+GCGALHLMGF
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGF 149

[Close]

BLAST of PI0026818 vs. NCBI nr
Match: KAA0060761.1 (formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-65
Identity = 135/148 (91.22%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           M  SAAILLSFSFL  LLLLA SQTSSPIS+D QNPDAEIKCGSCPCSNPCIQQLS PPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-PPP 60

Query: 63  PPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 122
           PPPPPP PCTP VSSRPPPPRFIYT SSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG
Sbjct: 61  PPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 120

Query: 123 TTGKRPGMAAVVVALGCGALHLMGFGKW 151
           TTG RPGMAAVVVALGCGALHLMGF KW
Sbjct: 121 TTGTRPGMAAVVVALGCGALHLMGFSKW 147

[Close]

BLAST of PI0026818 vs. NCBI nr
Match: KAE8653002.1 (hypothetical protein Csa_004575 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 118/129 (91.47%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTTGKR 128
           YFSGT   R
Sbjct: 121 YFSGTRRTR 129

[Close]

BLAST of PI0026818 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 8.2e-49
Identity = 111/150 (74.00%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAPSAAI LS SFLF  L LADSQ  SP  VD Q+P++EIKCGSCPCSNPC++Q   P
Sbjct: 1   MKMAPSAAIPLSLSFLFLFLHLADSQPFSP--VDPQDPNSEIKCGSCPCSNPCVKQF--P 60

Query: 61  PPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 120
           PPPPPPPPP C P +   PPPPRFIYT  SP PPPPRF YTTGVPGNLY+IDANN WYYF
Sbjct: 61  PPPPPPPPPNCKPALPPPPPPPRFIYTALSP-PPPPRFIYTTGVPGNLYQIDANNRWYYF 120

Query: 121 SGTTGKRPGMAAVVVALGCGALHLMGFGKW 151
           SGTT  RP  A +VVALGCGAL+LM FGKW
Sbjct: 121 SGTTRNRPATAVLVVALGCGALNLMAFGKW 145

[Close]

BLAST of PI0026818 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-08
Identity = 48/126 (38.10%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 22  LADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPP 81
           L +  +SS  S++ +  D   +     CS  CIQ   PP PPPP PPPP  P   + PPP
Sbjct: 27  LINGSSSSDASLEARKLD---EVDPIKCSPSCIQNPPPPSPPPPSPPPPACPPPPALPPP 86

Query: 82  PRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGA 141
           P    ++  P PPP  F Y TG PGNLY +D       F    GK      VV   G  A
Sbjct: 87  PPKKVSSYCPPPPPANFLYITGPPGNLYPVDEQ-----FGAAAGK---SFMVVKLSGLIA 141

Query: 142 LHLMGF 148
             +M F
Sbjct: 147 FGIMAF 141

[Close]

BLAST of PI0026818 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 78  RPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVA 137
           RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S           V+V 
Sbjct: 29  RPPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLLVIVI 88

Query: 138 LGCGALH 144
           +G G ++
Sbjct: 89  VGFGVIN 95

[Close]

BLAST of PI0026818 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 39/101 (38.61%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 20  LLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPM-VSSR 79
           +L+A    +SPI ++ ++  AE+     PC        + PPPPP PPPP CTP      
Sbjct: 15  ILMAIVILASPIIINAEDSSAEVDVNCIPCLQ------NQPPPPPSPPPPSCTPSPPPPS 74

Query: 80  PPPPRFIYTTSSPAPPPPR-------FTYTTGVPGNLYEID 113
           PPPP+      SP PPPP        FTY    PG+LY I+
Sbjct: 75  PPPPKKSSCPPSPLPPPPPPPPPNYVFTYP---PGDLYPIE 106

[Close]

BLAST of PI0026818 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 42/113 (37.17%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 4   APSAAILLSFSFLFHLLLL--ADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPP 63
           A +A +L +  FL   +++  +DS T+  +  D       IKC       PC+Q + PP 
Sbjct: 48  ALAATLLTTVVFLTFPMIINASDSSTNRKLEED------PIKC------TPCLQNIPPPS 107

Query: 64  PPPPPPPPP--CTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID 113
           PPPP PPPP    P     P PP+  Y      PPP  + Y TG PG LY ID
Sbjct: 108 PPPPSPPPPSQACPPPPLPPSPPKKSYC----PPPPSTYIYMTGPPGELYPID 144

[Close]

BLAST of PI0026818 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 41.6 bits (96), Expect = 6.6e-04
Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 42  IKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPP-PPRFTY 101
           I C S  CS P      PPPPPPPPPPPP  P     PPPP ++Y +  P PP PP + Y
Sbjct: 367 IDCASFGCSPPS-PPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVY 426

Query: 102 TTGVPGNLY 110
               P  +Y
Sbjct: 427 PPPPPPYVY 434

The following BLAST results are available for this feature:

BLAST of PI0026818 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026818 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7R0	6.5e-68	90.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1	[more]
A0A5A7V4T2	2.3e-65	91.22	Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A6J1J7W0	1.6e-45	71.62	probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GAW3	5.1e-28	58.00	leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A5N6QWV0	3.1e-17	43.51	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007840 PE=4 SV=1	[more]

BLAST of PI0026818 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651408.1	1.3e-67	90.79	leucine-rich repeat extensin-like protein 3 [Cucumis sativus]	[more]
KAE8650628.1	9.7e-66	91.28	hypothetical protein Csa_011452 [Cucumis sativus]	[more]
KAA0060761.1	4.8e-65	91.22	formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein...	[more]
KAE8653002.1	2.2e-54	91.47	hypothetical protein Csa_004575 [Cucumis sativus]	[more]
XP_023528316.1	8.2e-49	74.00	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0026818 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	2.6e-08	38.10	hydroxyproline-rich glycoprotein family protein	[more]
AT3G03350.2	1.3e-07	41.79	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G02405.1	3.9e-04	38.61	proline-rich family protein	[more]
AT1G70990.1	5.0e-04	37.17	proline-rich family protein	[more]
AT3G22800.1	6.6e-04	46.38	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..97
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 9..91
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 92..145
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 92..145
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 9..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026818.1	PI0026818.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane