PI0026795 (gene) Melon (PI 482460) v1

Overview
NamePI0026795
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 3115206 .. 3115520 (+)
RNA-Seq ExpressionPI0026795
SyntenyPI0026795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTTTCTCTCTCTCATACCCTAAAACACATAGTTGTTGCAGTTTCTCTTCAATAATACCAATACAAATACAATACTTTTGTGGTTTTTGAGCCTTCAATTTCAAATAATAATCCTCATCATGAGTTAATGATGATGATGAAGAAGAAGAAGGTACCATCATCATCATCGACAACAACGACAATGTTAACATTGACGCCTCAAACATCTCTCTCTTCATTAACTAATTCTGATCCTCAACAATCCAACAATATCCCAACTTTGATGGATTTGGCCAGTGCCTTCTAG

mRNA sequence

ATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTTTCTCTCTCTCATACCCTAAAACACATAGTTGTTGCACCTTCAATTTCAAATAATAATCCTCATCATGAGTTAATGATGATGATGAAGAAGAAGAAGGTACCATCATCATCATCGACAACAACGACAATGTTAACATTGACGCCTCAAACATCTCTCTCTTCATTAACTAATTCTGATCCTCAACAATCCAACAATATCCCAACTTTGATGGATTTGGCCAGTGCCTTCTAG

Coding sequence (CDS)

ATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTTTCTCTCTCTCATACCCTAAAACACATAGTTGTTGCACCTTCAATTTCAAATAATAATCCTCATCATGAGTTAATGATGATGATGAAGAAGAAGAAGGTACCATCATCATCATCGACAACAACGACAATGTTAACATTGACGCCTCAAACATCTCTCTCTTCATTAACTAATTCTGATCCTCAACAATCCAACAATATCCCAACTTTGATGGATTTGGCCAGTGCCTTCTAG

Protein sequence

MREEREVVKLLSLSHTLKHIVVAPSISNNNPHHELMMMMKKKKVPSSSSTTTTMLTLTPQTSLSSLTNSDPQQSNNIPTLMDLASAF
Homology
[Close]
BLAST of PI0026795 vs. ExPASy TrEMBL
Match: A0A0A0KJS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.5e-19
Identity = 71/108 (65.74%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 1   MREEREVVKLLSLSH-------------------TLKHIVVAPSISNNNPHHELMMMMKK 60
           MREE+EVVKLLSLS                    T   +V  PSISNNNPHHELMM MKK
Sbjct: 39  MREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKK 98

Query: 61  KKVPSSSSTTTTMLTLTPQTSLS-SLTNS-----DPQQSNNIPTLMDL 84
           KKVPSSSSTTTTMLTL PQTSLS SLT+S     D QQSNNIPTLMDL
Sbjct: 99  KKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNNIPTLMDL 146

[Close]
BLAST of PI0026795 vs. ExPASy TrEMBL
Match: A0A5D3CME5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005880 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.0e-18
Identity = 69/107 (64.49%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 1   MREEREVVKLLSLS------------------HTLKHIVVAPSISNNNPHHELMMMMKKK 60
           MREEREVVKLLSLS                  +T   +V  PSISN++PHHELMM MKKK
Sbjct: 38  MREEREVVKLLSLSQYPKTHSCCSFFFNNTNTNTNTCVVFEPSISNSSPHHELMMTMKKK 97

Query: 61  KVPSSSSTTTTMLTLTPQTSLS-SLTNS-----DPQQSNNIPTLMDL 84
           KVPSSSS+TTTMLTL PQTSLS SLT S     D QQSNNIPTLMDL
Sbjct: 98  KVPSSSSSTTTMLTLLPQTSLSLSLTTSSSHDHDHQQSNNIPTLMDL 144

[Close]
BLAST of PI0026795 vs. NCBI nr
Match: KGN49044.1 (hypothetical protein Csa_002770 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 71/108 (65.74%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 1   MREEREVVKLLSLSH-------------------TLKHIVVAPSISNNNPHHELMMMMKK 60
           MREE+EVVKLLSLS                    T   +V  PSISNNNPHHELMM MKK
Sbjct: 39  MREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKK 98

Query: 61  KKVPSSSSTTTTMLTLTPQTSLS-SLTNS-----DPQQSNNIPTLMDL 84
           KKVPSSSSTTTTMLTL PQTSLS SLT+S     D QQSNNIPTLMDL
Sbjct: 99  KKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNNIPTLMDL 146

[Close]
BLAST of PI0026795 vs. NCBI nr
Match: TYK12991.1 (hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 69/107 (64.49%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 1   MREEREVVKLLSLS------------------HTLKHIVVAPSISNNNPHHELMMMMKKK 60
           MREEREVVKLLSLS                  +T   +V  PSISN++PHHELMM MKKK
Sbjct: 38  MREEREVVKLLSLSQYPKTHSCCSFFFNNTNTNTNTCVVFEPSISNSSPHHELMMTMKKK 97

Query: 61  KVPSSSSTTTTMLTLTPQTSLS-SLTNS-----DPQQSNNIPTLMDL 84
           KVPSSSS+TTTMLTL PQTSLS SLT S     D QQSNNIPTLMDL
Sbjct: 98  KVPSSSSSTTTMLTLLPQTSLSLSLTTSSSHDHDHQQSNNIPTLMDL 144

The following BLAST results are available for this feature:
BLAST of PI0026795 vs.
Match NameE-valueIdentityDescription
BLAST of PI0026795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJS55.5e-1965.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1[more]
A0A5D3CME58.0e-1864.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0026795 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49044.11.1e-1865.74hypothetical protein Csa_002770 [Cucumis sativus][more]
TYK12991.11.7e-1764.49hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa][more]
BLAST of PI0026795 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0026795.1PI0026795.1mRNA