PI0026723 (gene) Melon (PI 482460) v1

Overview
NamePI0026723
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionLOB domain-containing protein
Locationchr03: 3366782 .. 3367321 (-)
RNA-Seq ExpressionPI0026723
SyntenyPI0026723
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCAAGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGTTCATCAAGTTGCATTTTTTCTCCTTATTTTCCTTCAAATAATCCTCAAAGATTCGCCATTGTTCATAGAATTTATGGTGCTAGTAATCTTGCTAAATTCCTTCAAGTAAGTATATTCTTTATTTATTTGAACAATTAATTAAACTATAATCTAATTTATATTAAATTAAATCTTTCACTCTCTTTTGGTTAATTTAATTTAATCAGCAAGTTCCTATTGGATCTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAACTGTAGAATTGAAGATCCAATTTACGGATGTGTTGGAATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCAAGCTCAGATTGCTCTCCTGGCTTCCAACCTTCAACAAGCCCAACACCAAGATTTTGCCTTTCACCCCAGCTTAGGCCCAATTACTATTGGGCTTTCCTCTCCACCCCATTTGGTTTCATTCTACCCTTTCTAA

mRNA sequence

ATGATTCCAAGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGTTCATCAAGTTGCATTTTTTCTCCTTATTTTCCTTCAAATAATCCTCAAAGATTCGCCATTGTTCATAGAATTTATGGTGCTAGTAATCTTGCTAAATTCCTTCAATTCCTATTGGATCTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAACTGTAGAATTGAAGATCCAATTTACGGATGTGTTGGAATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCAAGCTCAGATTGCTCTCCTGGCTTCCAACCTTCAACAAGCCCAACACCAAGATTTTGCCTTTCACCCCAGCTTAGGCCCAATTACTATTGGGCTTTCCTCTCCACCCCATTTGGTTTCATTCTACCCTTTCTAA

Coding sequence (CDS)

ATGATTCCAAGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGTTCATCAAGTTGCATTTTTTCTCCTTATTTTCCTTCAAATAATCCTCAAAGATTCGCCATTGTTCATAGAATTTATGGTGCTAGTAATCTTGCTAAATTCCTTCAATTCCTATTGGATCTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAACTGTAGAATTGAAGATCCAATTTACGGATGTGTTGGAATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCAAGCTCAGATTGCTCTCCTGGCTTCCAACCTTCAACAAGCCCAACACCAAGATTTTGCCTTTCACCCCAGCTTAGGCCCAATTACTATTGGGCTTTCCTCTCCACCCCATTTGGTTTCATTCTACCCTTTCTAA

Protein sequence

MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLDLRGEAAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDFAFHPSLGPITIGLSSPPHLVSFYPF
Homology
BLAST of PI0026723 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGE 60
           M P RCAACKYLRRRC   C+FSPYFP N+PQ+FA VHRIYGA N++K LQ L D  R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           A E+L FEA CR++DP+YGCVGII  L+ ++   + +LAKTQA+IA+  + L Q Q+ DF
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

BLAST of PI0026723 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35
Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGE 60
           M P RCAACKYLRRRC   C+FSPYFP N+PQ+FA VHRIYGA N++K LQ L D  R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           A E+L FEA CR++DP+YGCVGII  L+ ++   + +LAKTQA+IA+  + L Q    DF
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

BLAST of PI0026723 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0

Query: 4   SRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFL-LDLRGEAAE 63
           S CAACK LRRRC+  C+FSPYFP++ PQ+FA VHR++GASN+ K LQ L +  RG+A  
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 64  TLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDFAFH 123
           ++ +EAN R+ DP+YGCVG IS LQ ++ V + QLA  QA++     +L+  Q  +F  H
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVV----HLRVRQSTNFPGH 127

BLAST of PI0026723 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26
Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = 0

Query: 4   SRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFL-LDLRGEAAE 63
           S CA+CK LRRRC+  CIF+PYFP ++P +FAIVH+++GASN++K LQ L +  R +A  
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 64  TLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQ---QAQHQ 118
           +L FEAN R+ DP+YGCVG IS LQ ++   + QLA  QA+I  +    +   Q+ HQ
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

BLAST of PI0026723 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 4   SRCAACKYLRRRC-SSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGEAA 63
           S CA CK LRR+C   SC+F+PYFP+  P +FAIVH+I+GASN+ K LQ L +  R +A 
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 64  ETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQI 105
           +++ +EAN RI+DP+YGCVG IS L  +L   +TQLA  QA++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAEL 115

BLAST of PI0026723 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 120/139 (86.33%), Postives = 128/139 (92.09%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFL-LDLRGE 60
           MIPSRCAACKYLRRRCSS+CIFSPYFPSNNPQRFAIVHRIYGASN+AKFLQ + +DLRGE
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           AAETLYFEA CRIEDPIYGCVGIISQLQYELHVAETQLAKT+A+IALLASN QQAQH+DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AF-HPSLGPITIGLSSPPH 138
            F  PS GPI  GLS+P H
Sbjct: 121 PFDDPSSGPIFTGLSTPAH 139

BLAST of PI0026723 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51
Identity = 108/143 (75.52%), Postives = 120/143 (83.92%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC+S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  L LR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           AAE+L+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNLQ+AQ  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AFHPSLGPIT-----IGLSSPPH 138
           A  P  GP T     IGLS+P H
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAH 143

BLAST of PI0026723 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.0e-51
Identity = 109/144 (75.69%), Postives = 120/144 (83.33%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  + LR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNL-QQAQHQD 120
           AAETL+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNL Q+AQ QD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAFHPSLGPIT-----IGLSSPPH 138
           FA  P  GP T     IGLS+P H
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAH 144

BLAST of PI0026723 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.7e-50
Identity = 108/145 (74.48%), Postives = 118/145 (81.38%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRF IVHRIYGASN+AKFL Q    LRGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQ--QAQHQ 120
           AAETL FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA +ASN+Q  Q Q Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFHPSLGPIT-----IGLSSPPH 138
           DFAF P  GP +     IGLSSP H
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAH 145

BLAST of PI0026723 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.2e-49
Identity = 107/144 (74.31%), Postives = 117/144 (81.25%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRF IVHRIYGASN+AKFL Q    LR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQ-QAQHQD 120
           AAETL FEA CRIEDP+YGCVGIISQLQ+ELHVAETQLAKT+A+IA +ASN+Q Q Q QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAFHPSLGPIT-----IGLSSPPH 138
           FAF P  GP +     IGLS+P H
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAH 144

BLAST of PI0026723 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52
Identity = 110/143 (76.92%), Postives = 120/143 (83.92%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  L LR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           AAETL+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNLQ+AQ QDF
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120

Query: 121 AFHPSLGPIT-----IGLSSPPH 138
           A  P  GP T     IGLS+P H
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAH 143

BLAST of PI0026723 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 3.8e-51
Identity = 108/143 (75.52%), Postives = 120/143 (83.92%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC+S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  L LR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           AAE+L+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNLQ+AQ  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AFHPSLGPIT-----IGLSSPPH 138
           A  P  GP T     IGLS+P H
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAH 143

BLAST of PI0026723 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 107/143 (74.83%), Postives = 119/143 (83.22%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  + LR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           AAE+L+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNLQ+AQ  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQLHDF 120

Query: 121 AFHPSLGPIT-----IGLSSPPH 138
           A  P  GP T     IGLS+P H
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAH 143

BLAST of PI0026723 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 109/144 (75.69%), Postives = 120/144 (83.33%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRFAIVHRIYGASN+AKFL Q  + LR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNL-QQAQHQD 120
           AAETL+FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA LASNL Q+AQ QD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAFHPSLGPIT-----IGLSSPPH 138
           FA  P  GP T     IGLS+P H
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAH 144

BLAST of PI0026723 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49
Identity = 108/145 (74.48%), Postives = 118/145 (81.38%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFL-QFLLDLRGE 60
           MI  RCAACKYLRRRC S CIFSP+FPSNNPQRF IVHRIYGASN+AKFL Q    LRGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQ--QAQHQ 120
           AAETL FEA CRIEDP+YGCVGIISQLQ++LHVAETQLAKT+A+IA +ASN+Q  Q Q Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFHPSLGPIT-----IGLSSPPH 138
           DFAF P  GP +     IGLSSP H
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAH 145

BLAST of PI0026723 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 154.1 bits (388), Expect = 8.7e-38
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGE 60
           M P RCAACKYLRRRC   C+FSPYFP N+PQ+FA VHRIYGA N++K LQ L D  R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           A E+L FEA CR++DP+YGCVGII  L+ ++   + +LAKTQA+IA+  + L Q Q+ DF
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

BLAST of PI0026723 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 150.6 bits (379), Expect = 9.6e-37
Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0

Query: 1   MIPSRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGE 60
           M P RCAACKYLRRRC   C+FSPYFP N+PQ+FA VHRIYGA N++K LQ L D  R E
Sbjct: 1   MNPKRCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAE 60

Query: 61  AAETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDF 120
           A E+L FEA CR++DP+YGCVGII  L+ ++   + +LAKTQA+IA+  + L Q    DF
Sbjct: 61  AVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

BLAST of PI0026723 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0

Query: 4   SRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFL-LDLRGEAAE 63
           S CAACK LRRRC+  C+FSPYFP++ PQ+FA VHR++GASN+ K LQ L +  RG+A  
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 64  TLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQQAQHQDFAFH 123
           ++ +EAN R+ DP+YGCVG IS LQ ++ V + QLA  QA++     +L+  Q  +F  H
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVV----HLRVRQSTNFPGH 127

BLAST of PI0026723 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = 0

Query: 4   SRCAACKYLRRRCSSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFL-LDLRGEAAE 63
           S CA+CK LRRRC+  CIF+PYFP ++P +FAIVH+++GASN++K LQ L +  R +A  
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 64  TLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQIALLASNLQ---QAQHQ 118
           +L FEAN R+ DP+YGCVG IS LQ ++   + QLA  QA+I  +    +   Q+ HQ
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

BLAST of PI0026723 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 115.5 bits (288), Expect = 3.4e-26
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 4   SRCAACKYLRRRC-SSSCIFSPYFPSNNPQRFAIVHRIYGASNLAKFLQFLLD-LRGEAA 63
           S CA CK LRR+C   SC+F+PYFP+  P +FAIVH+I+GASN+ K LQ L +  R +A 
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 64  ETLYFEANCRIEDPIYGCVGIISQLQYELHVAETQLAKTQAQI 105
           +++ +EAN RI+DP+YGCVG IS L  +L   +TQLA  QA++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAEL 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P594681.2e-3660.00LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S... [more]
P594671.4e-3559.17LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S... [more]
Q9SHE92.1e-2850.83LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8LBW31.5e-2650.00LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SA514.8e-2553.40LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0LLX61.1e-5986.33LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV... [more]
A0A6J1E5I61.8e-5175.52LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430... [more]
A0A6J1JCD07.0e-5175.69LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318... [more]
A0A1S3AY367.7e-5074.48LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE... [more]
A0A0A0L9N72.2e-4974.31LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV... [more]
Match NameE-valueIdentityDescription
XP_023522202.14.5e-5276.92LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo][more]
XP_022923144.13.8e-5175.52LOB domain-containing protein 24-like [Cucurbita moschata][more]
KAG7014789.11.4e-5074.83LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_022985104.11.4e-5075.69LOB domain-containing protein 24-like [Cucurbita maxima][more]
XP_008439169.11.6e-4974.48PREDICTED: LOB domain-containing protein 24-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G26660.18.7e-3860.00LOB domain-containing protein 24 [more]
AT3G26620.19.6e-3759.17LOB domain-containing protein 23 [more]
AT1G31320.11.5e-2950.83LOB domain-containing protein 4 [more]
AT2G30130.11.1e-2750.00Lateral organ boundaries (LOB) domain family protein [more]
AT1G16530.13.4e-2653.40ASYMMETRIC LEAVES 2-like 9 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..117
NoneNo IPR availablePANTHERPTHR31301:SF120LOB DOMAIN-CONTAINING PROTEIN 23-RELATEDcoord: 1..117
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 1..117
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 5..101
e-value: 1.4E-34
score: 118.6
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 4..104
score: 22.186447

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0026723.1PI0026723.1mRNA