PI0026622 (gene) Melon (PI 482460) v1

Overview


Name	PI0026622
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	glycine-rich cell wall structural protein 2-like
Location	chr02: 21025265 .. 21026477 (-)
RNA-Seq Expression	PI0026622
Synteny	PI0026622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATCCCTCCACTTCAAAATTATTAACACTTGTCCAAACGCCATAATCTTCAAACAATTTTGGGCATCCTTAGCCACACAATTTGCCCTCCCCAATCTTTTTGTAGTGGCCACTTCATCGTAACATTTCACAAATGGTCCTATCACCTTCAACAAATTTTGCTATAAATACCTCCCTCAAGTCTCTCCAATAATTCCCACATCACAAACTTCTTAAACCCTAAAACCTAGAGAAGCTTTAATACAGTCCCACAATATTGTTTAATTTGTTTAAACAATAATGGCTTCAATCAAGTCCCAGCTTGCTCTTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCGAGAAAGGATCTTGGTATTGACCTTGGAGGAGTAGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCCTAGGTGGAAGTGGCTCTGGCTCTGGTTCAGGCTCTGGCTCTGGATCAGGATCTGGGTCGAGTTCATCTTCATCATCATACTCTTCGAGCTCAAGCTCAGGGTCTGGAGCTGGGTCCGAAGCTGGTTCTTACGCTGGCTCGTACGCAGGGTCTCGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCAGGGTATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGCAGCAATGGCAATGGTGAAGGATATGGAGAAGGTCATGGCTATGGTGAGGGTCATGGATATGGGGGAGGAAACTGAAGAGAAAAAAATCATAAAAGGACGTATGACAAAAGTATTAGGTTACATAGTGGATTTATGTCTTTATCTTAACTTTATGTATTTAAATAAAGATATATAAGAGAAGATGGAGGATTGTTTAGTAGTGTGTGTTTTAGCAGTCGTGAAATTGTTGTAGATCATGTGTGTGATGGATTTTCATGTTGTTTCTTGCTTTTAGGCAATTTCATGTGTATGTTAATGTTTTACTACATATTAATGTAGAGTTGGGTAGAATTTACATGCTAATACAGTTTTCTTTTTAAAACTCCCCTAAATTGTTTTCACACTATATGTTGCAGTTGTCAGTGGGAAAAATCATATCTTTTACGGAAAGAAAAAAGAACATATGTTGATTAAGATTTTCTTTTCTTATATATACTAAGCTCGTAACACATGTGATCACATGAAATTTATAGGTTTTATTTTAATACATAAAAAAAAATTATATTA

mRNA sequence

CCAATCCCTCCACTTCAAAATTATTAACACTTGTCCAAACGCCATAATCTTCAAACAATTTTGGGCATCCTTAGCCACACAATTTGCCCTCCCCAATCTTTTTGTAGTGGCCACTTCATCGTAACATTTCACAAATGGTCCTATCACCTTCAACAAATTTTGCTATAAATACCTCCCTCAAGTCTCTCCAATAATTCCCACATCACAAACTTCTTAAACCCTAAAACCTAGAGAAGCTTTAATACAGTCCCACAATATTGTTTAATTTGTTTAAACAATAATGGCTTCAATCAAGTCCCAGCTTGCTCTTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCGAGAAAGGATCTTGGTATTGACCTTGGAGGAGTAGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCCTAGGTGGAAGTGGCTCTGGCTCTGGTTCAGGCTCTGGCTCTGGATCAGGATCTGGGTCGAGTTCATCTTCATCATCATACTCTTCGAGCTCAAGCTCAGGGTCTGGAGCTGGGTCCGAAGCTGGTTCTTACGCTGGCTCGTACGCAGGGTCTCGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCAGGGTATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGCAGCAATGGCAATGGTGAAGGATATGGAGAAGGTCATGGCTATGGTGAGGGTCATGGATATGGGGGAGGAAACTGAAGAGAAAAAAATCATAAAAGGACGTATGACAAAAGTATTAGGTTACATAGTGGATTTATGTCTTTATCTTAACTTTATGTATTTAAATAAAGATATATAAGAGAAGATGGAGGATTGTTTAGTAGTGTGTGTTTTAGCAGTCGTGAAATTGTTGTAGATCATGTGTGTGATGGATTTTCATGTTGTTTCTTGCTTTTAGGCAATTTCATGTGTATGTTAATGTTTTACTACATATTAATGTAGAGTTGGGTAGAATTTACATGCTAATACAGTTTTCTTTTTAAAACTCCCCTAAATTGTTTTCACACTATATGTTGCAGTTGTCAGTGGGAAAAATCATATCTTTTACGGAAAGAAAAAAGAACATATGTTGATTAAGATTTTCTTTTCTTATATATACTAAGCTCGTAACACATGTGATCACATGAAATTTATAGGTTTTATTTTAATACATAAAAAAAAATTATATTA

Coding sequence (CDS)

ATGGCTTCAATCAAGTCCCAGCTTGCTCTTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCGAGAAAGGATCTTGGTATTGACCTTGGAGGAGTAGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCCTAGGTGGAAGTGGCTCTGGCTCTGGTTCAGGCTCTGGCTCTGGATCAGGATCTGGGTCGAGTTCATCTTCATCATCATACTCTTCGAGCTCAAGCTCAGGGTCTGGAGCTGGGTCCGAAGCTGGTTCTTACGCTGGCTCGTACGCAGGGTCTCGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCAGGGTATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGCAGCAATGGCAATGGTGAAGGATATGGAGAAGGTCATGGCTATGGTGAGGGTCATGGATATGGGGGAGGAAACTGA

Protein sequence

MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN

Homology

[Close]

BLAST of PI0026622 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.9e-49
Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASIKS LALVVCLLLSFS  LSEGRVARKDLGIDLGG+GVGLGAGIGLG+GGSGSGSGS
Sbjct: 1   MASIKS-LALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG
Sbjct: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN
Sbjct: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of PI0026622 vs. ExPASy TrEMBL
Match: A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASIKS LA+VVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLG GIGLG+GGSGSGSGS
Sbjct: 1   MASIKS-LAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG
Sbjct: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120

Query: 121 YGGGSGR-GGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Sbjct: 121 YGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 153

[Close]

BLAST of PI0026622 vs. ExPASy TrEMBL
Match: A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.0e-35
Identity = 133/171 (77.78%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASI S   +VVC LLSFS ILS+ RVARKDLG+DLGG+GVG+G GIGLGLGGSGSGSGS
Sbjct: 1   MASINS--LIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGS 60

Query: 61  GSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSR 120
           GSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSR
Sbjct: 61  GSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSR 120

Query: 121 AGSGSGGNRNGGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           AGSGSG NRNGGSG GSGYGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Sbjct: 121 AGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of PI0026622 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 128/153 (83.66%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASI S   +VVC LLSFS ILS+ RVARKDLG+DLGG+GVG+G GIGLGLGGSGSGSGS
Sbjct: 1   MASINS--LIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGSRAGSGSG NRNGGSG GSG
Sbjct: 61  GSGSGSGSGSSSSSSSSSYSSSSGSGSG--AGSEAGSYAGSRAGSGSGPNRNGGSGSGSG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Sbjct: 121 YGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of PI0026622 vs. ExPASy TrEMBL
Match: A0A6J1C497 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111007250 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MA+I+   A+V  +L   +AI+SE RVARKDLGIDLGGVGVGLGAGIGLG GGSGSGSG+
Sbjct: 1   MAAIRC-FAVVAFILGLSAAIVSEARVARKDLGIDLGGVGVGLGAGIGLG-GGSGSGSGA 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           G+GSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNR  GSG GSG
Sbjct: 61  GAGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNR--GSGSGSG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGR    G+GEGYGEGHGYGEGHGYGGGN
Sbjct: 121 YGGGSGR----GSGEGYGEGHGYGEGHGYGGGN 145

[Close]

BLAST of PI0026622 vs. NCBI nr
Match: XP_008443813.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASIKS LALVVCLLLSFS  LSEGRVARKDLGIDLGG+GVGLGAGIGLG+GGSGSGSGS
Sbjct: 1   MASIKS-LALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG
Sbjct: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN
Sbjct: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of PI0026622 vs. NCBI nr
Match: XP_004146660.2 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypothetical protein Csa_020101 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-46
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASIKS LA+VVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLG GIGLG+GGSGSGSGS
Sbjct: 1   MASIKS-LAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG
Sbjct: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120

Query: 121 YGGGSGR-GGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Sbjct: 121 YGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 153

[Close]

BLAST of PI0026622 vs. NCBI nr
Match: XP_038879748.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-39
Identity = 137/153 (89.54%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASIKS LA+VVC LLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLG    GSGS
Sbjct: 1   MASIKS-LAVVVCFLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLG----GSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGS SSSSS S SSSSSSGSGAGSEAGSYAGSYAGSRA  GSGGNRNGGSG G+G
Sbjct: 61  GSGSGSGSSSSSSSYSSSSSSSSGSGAGSEAGSYAGSYAGSRA--GSGGNRNGGSGSGTG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGRGG NG GEGYGEGHGYGEGHGYGGGN
Sbjct: 121 YGGGSGRGGGNGGGEGYGEGHGYGEGHGYGGGN 146

[Close]

BLAST of PI0026622 vs. NCBI nr
Match: XP_022921881.1 (cell wall protein IFF6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 158.7 bits (400), Expect = 4.0e-35
Identity = 133/171 (77.78%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASI S   +VVC LLSFS ILS+ RVARKDLG+DLGG+GVG+G GIGLGLGGSGSGSGS
Sbjct: 1   MASINS--LIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGS 60

Query: 61  GSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSR 120
           GSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSR
Sbjct: 61  GSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSR 120

Query: 121 AGSGSGGNRNGGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           AGSGSG NRNGGSG GSGYGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Sbjct: 121 AGSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of PI0026622 vs. NCBI nr
Match: XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata])

HSP 1 Score: 157.5 bits (397), Expect = 9.0e-35
Identity = 128/153 (83.66%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MASIKSQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGS 60
           MASI S   +VVC LLSFS ILS+ RVARKDLG+DLGG+GVG+G GIGLGLGGSGSGSGS
Sbjct: 1   MASINS--LIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGS 60

Query: 61  GSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSG 120
           GSGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGSRAGSGSG NRNGGSG GSG
Sbjct: 61  GSGSGSGSGSSSSSSSSSYSSSSGSGSG--AGSEAGSYAGSRAGSGSGPNRNGGSGSGSG 120

Query: 121 YGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 154
           YGGGSGRG  NG GEGYGEGHGYGEG GYGGGN
Sbjct: 121 YGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of PI0026622 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein )

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22
Identity = 97/150 (64.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 6   SQLALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGSG 65
           S   +++ L+L+ S ++SE RVARKDLG+DLGG+G G+G GIG+G GGSGSG+G+GSGSG
Sbjct: 7   SSSLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSG 66

Query: 66  SGSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGYG 125
            G  SSSSSSS SSSSSSG G   AGSEAGSYAGS+AGS +G  SG  R  GSG G G+G
Sbjct: 67  GGGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHG 126

Query: 126 GGSGRGGSNGNGEGYGEGHGYGEGHGYGGG 153
           GG G GG  G G G G G GYGEG GYGGG
Sbjct: 127 GGGGGGGGRGGGGGSGNGEGYGEGGGYGGG 156

[Close]

BLAST of PI0026622 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 71/101 (70.30%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 8   LALVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGSGSG 67
           L L+  +++S   +L+E R+ARKDLGIDLGG+G+GLG G+G+GLGG GSGSG+G+GSGSG
Sbjct: 7   LFLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGG-GSGSGAGAGSGSG 66

Query: 68  SGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSG 109
           SGS SSSSS SSSSSS SG+G  AGS AGS+AGSRAGSGSG
Sbjct: 67  SGSRSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGSG 106

The following BLAST results are available for this feature:

BLAST of PI0026622 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026622 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9N0	6.9e-49	96.73	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LTK9	2.5e-46	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1	[more]
A0A6J1E2L1	2.0e-35	77.78	cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1E521	4.4e-35	83.66	putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos...	[more]
A0A6J1C497	2.0e-32	83.01	putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3...	[more]

BLAST of PI0026622 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443813.1	1.4e-48	96.73	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
XP_004146660.2	5.1e-46	95.45	glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypoth...	[more]
XP_038879748.1	3.5e-39	89.54	glycine-rich cell wall structural protein 2-like [Benincasa hispida]	[more]
XP_022921881.1	4.0e-35	77.78	cell wall protein IFF6-like isoform X1 [Cucurbita moschata]	[more]
XP_022921883.1	9.0e-35	83.66	putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita mosch...	[more]

BLAST of PI0026622 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30460.1	5.5e-22	64.67	glycine-rich protein	[more]
AT4G30450.1	1.2e-16	70.30	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..153
None	No IPR available	PANTHER	PTHR38934:SF13	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATED	coord: 1..153
None	No IPR available	PANTHER	PTHR38934	HYPHALLY REGULATED CELL WALL PROTEIN 1	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026622.1	PI0026622.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane