PI0026569 (gene) Melon (PI 482460) v1

Overview


Name	PI0026569
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 4496790 .. 4498395 (+)
RNA-Seq Expression	PI0026569
Synteny	PI0026569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCTAGGTTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGCTTCCATGGAATTGTTCATGATTAAAACGGGCTTCTGTGTGAGAACCATCCTTTTTCCTCTCTCTTCCTCAGTTCACCATTGTTCATTCATTTTGTTTCCTGTATTTAATTGAAGTACTTTTGGTAGTGGCTTCTTCGTCTTAATTTTTTTATCTTTCAATAAATCGTAGCAAATCGATTATCTGCGAGAATTTGAGGAGGTTTGTCAATAGTTATTTTTTAGGGTTTAGGGTTTGGGTGTTATGTTATATTAAATTTATCATCGTCTATCGGCTTAAGGTTAACTAGTGATTTAAGATGGTATTATAGGATCTGGTCTACTGTTCAAGTACAATAGATTAAGCTTTTGGGTCTATCAGTCTTTTGAGGTTGGGTAGATTCTTAGAATTTTTTACAATTTATGTTCAAGTAGTTTGAAGAAATTTTGCTTCCAATAAATCTGATCTAACTTTTGATTTTGGTGTTGGATAGATATCAAGAAGTAAATAAGTTGAATTGAGTGCAAGTTGTTATGTTTTATGTGCACATTAAAGACCAACAATAAGCCTCCTATATAATTAGCCAAAATCGGGATGCAGAGTGACAATGTAAAAATGAATGAATATAAAATAAACGACCTTGATATTCAGTACTATAGTTACACTTGCAATGTCTTCTAAAGTTCAAGGCGCAAAGAAAATTGCGCCCTTTTTTCTTTTTTGAAGGCACACCATGTGTAAAATTACTACATAAAGATGAGAAAGCATAGTTGGAGTAGAAATATAAAAAAAAATCTCTAAACATAAGAAATTTTGCATTTAGACTTAGTAACTTTGATTTTTTTAGTTAATAAAGAAAAAACCCCTAATTATTATTAGTTTTTAAAACAATAAGAAAGCCTCAAGGCCCATGGGTTTGACTTTTGAGCCTTGGGGCTTCACAGAAGGTAATTCTTATTTTTGGAGTCTTGCCGTTTCAATGGCGGGGCGCACCTGGGAGGGCTTTGTAAAACAGGACACGCAATGATCCAAGAGGGGGATAGATGAAAATACTGTGTTCCTGTTCATCCTATCCCGCAGTAATTCATTGAAAGTTATGTTTCTTGTTGAAAAGAAAAAAAAAAAATGAAGAAAGCATTGTCAGAGGCCTTTCTTTAGCTTATCCATAGCTTATGACTTAGGCAAATATCTTCTGGTCCAATGGTGTTTTTGCTCTTCTTTGGAGGCTTTGGTTTGAAGAGTGTTATTTTTTGGGATTGTTCTACTTGGTCCATTTTGTTTTAATTATAGCCTAACTCAGATCTACACCAGTTAGCTTATCCATATCTTCTTTTTTGTAACCCAAGTACTGATTCAATTGCTCTATTTAAGTCTATTTCTTTATTTGATGATCTGTTGAGTGGTATATGATTTTCACTCTATTTTGGCTTTGCATATTACAGATGATAAAGTAACAGTTATTGAATCGGAGAAGCTGGCTTGGGAAAACTCTCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCTTGGAGGAACATCGATGCTGCTGCCGGGGCCAGGAAAGACAACTAA

mRNA sequence

ATGAAGTTTCTAGGTTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGCTTCCATGGAATTGTTCATGATTAAAACGGGCTTCTATGATAAAGTAACAGTTATTGAATCGGAGAAGCTGGCTTGGGAAAACTCTCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCTTGGAGGAACATCGATGCTGCTGCCGGGGCCAGGAAAGACAACTAA

Coding sequence (CDS)

ATGAAGTTTCTAGGTTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGCTTCCATGGAATTGTTCATGATTAAAACGGGCTTCTATGATAAAGTAACAGTTATTGAATCGGAGAAGCTGGCTTGGGAAAACTCTCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCTTGGAGGAACATCGATGCTGCTGCCGGGGCCAGGAAAGACAACTAA

Protein sequence

MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPWRNIDAAAGARKDN

Homology

[Close]

BLAST of PI0026569 vs. ExPASy TrEMBL
Match: A0A5A7SQJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001150 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.9e-30
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1   MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
           MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESE+LAWENSPEAQAIREALNPW
Sbjct: 90  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESERLAWENSPEAQAIREALNPW 149

Query: 61  RNIDAAAGARKDN 74
           RN DAAA AR+DN
Sbjct: 150 RNGDAAAEARQDN 162

[Close]

BLAST of PI0026569 vs. ExPASy TrEMBL
Match: A0A6J1H837 (uncharacterized protein LOC111460420 OS=Cucurbita moschata OX=3662 GN=LOC111460420 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-29
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEK+AWENSPEAQAIREALNPW
Sbjct: 1  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 60

Query: 61 RNIDAAAGARKD 73
          RN DAA  ARKD
Sbjct: 61 RNHDAAEEARKD 72

[Close]

BLAST of PI0026569 vs. ExPASy TrEMBL
Match: A0A6J1KWK7 (uncharacterized protein LOC111498883 OS=Cucurbita maxima OX=3661 GN=LOC111498883 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-29
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEK+AWENSPEAQAIREALNPW
Sbjct: 11 MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 70

Query: 61 RNIDAAAGARKD 73
          RN DAA  ARKD
Sbjct: 71 RNHDAAEEARKD 82

[Close]

BLAST of PI0026569 vs. ExPASy TrEMBL
Match: A0A6J1CA87 (uncharacterized protein LOC111009736 OS=Momordica charantia OX=3673 GN=LOC111009736 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
           MKFL WYVKIG VSALIGASME+FMIKTGFYDKVTV+ESEKLAWENSPEAQA+REALNPW
Sbjct: 81  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPW 140

Query: 61  RNIDAAAGARKD 73
           RN DA A A+KD
Sbjct: 141 RNRDAVAEAKKD 152

[Close]

BLAST of PI0026569 vs. ExPASy TrEMBL
Match: A0A0A0K8V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067430 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFL WYVKIGTVSALIG SMELFMIK+GFYDKV VIESE+LAWENSPEAQAIREALNPW
Sbjct: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60

Query: 61 RNIDAAAGARKDN 74
          RN DAA  A K+N
Sbjct: 61 RNSDAATEAGKEN 73

[Close]

BLAST of PI0026569 vs. NCBI nr
Match: XP_038906919.1 (uncharacterized protein LOC120092786 [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 3.2e-30
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEKLAWENSPEAQAIREALNPW
Sbjct: 1  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAIREALNPW 60

Query: 61 RNIDAAAGARKD 73
          RNIDAAA ARKD
Sbjct: 61 RNIDAAAEARKD 72

[Close]

BLAST of PI0026569 vs. NCBI nr
Match: KAA0033454.1 (hypothetical protein E6C27_scaffold111G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1   MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
           MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESE+LAWENSPEAQAIREALNPW
Sbjct: 90  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESERLAWENSPEAQAIREALNPW 149

Query: 61  RNIDAAAGARKDN 74
           RN DAAA AR+DN
Sbjct: 150 RNGDAAAEARQDN 162

[Close]

BLAST of PI0026569 vs. NCBI nr
Match: XP_023548311.1 (uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEK+AWENSPEAQAIREALNPW
Sbjct: 6  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 65

Query: 61 RNIDAAAGARKD 73
          RN DAA  ARKD
Sbjct: 66 RNHDAAEEARKD 77

[Close]

BLAST of PI0026569 vs. NCBI nr
Match: XP_022959449.1 (uncharacterized protein LOC111460420 [Cucurbita moschata] >XP_022959450.1 uncharacterized protein LOC111460420 [Cucurbita moschata] >KAG6575042.1 hypothetical protein SDJN03_25681, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEK+AWENSPEAQAIREALNPW
Sbjct: 1  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 60

Query: 61 RNIDAAAGARKD 73
          RN DAA  ARKD
Sbjct: 61 RNHDAAEEARKD 72

[Close]

BLAST of PI0026569 vs. NCBI nr
Match: XP_023006006.1 (uncharacterized protein LOC111498883 [Cucurbita maxima])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MKFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPW 60
          MKFLGWYVKIGTVSALIGASME+FMIKTGFYDKVTV+ESEK+AWENSPEAQAIREALNPW
Sbjct: 11 MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 70

Query: 61 RNIDAAAGARKD 73
          RN DAA  ARKD
Sbjct: 71 RNHDAAEEARKD 82

[Close]

BLAST of PI0026569 vs. TAIR 10
Match: AT3G62450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-22
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 2  KFLGWYVKIGTVSALIGASMELFMIKTGFYDKVTVIESEKLAWENSPEAQAIREALNPWR 61
          +FL WY+KI   SA+IG  ME FMIKTGFYDKVTVIE+E+ A ENSPEAQAIREALNPWR
Sbjct: 5  RFLDWYLKIAIGSAIIGGGMEFFMIKTGFYDKVTVIEAERRALENSPEAQAIREALNPWR 64

Query: 62 NIDA 66
          N DA
Sbjct: 65 NKDA 68

The following BLAST results are available for this feature:

BLAST of PI0026569 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQJ1	5.9e-30	94.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1H837	6.5e-29	91.67	uncharacterized protein LOC111460420 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A6J1KWK7	6.5e-29	91.67	uncharacterized protein LOC111498883 OS=Cucurbita maxima OX=3661 GN=LOC111498883...	[more]
A0A6J1CA87	2.1e-27	87.50	uncharacterized protein LOC111009736 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A0A0K8V0	1.4e-26	86.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067430 PE=4 SV=1	[more]

BLAST of PI0026569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906919.1	3.2e-30	95.83	uncharacterized protein LOC120092786 [Benincasa hispida]	[more]
KAA0033454.1	1.2e-29	94.52	hypothetical protein E6C27_scaffold111G001150 [Cucumis melo var. makuwa]	[more]
XP_023548311.1	1.3e-28	91.67	uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo]	[more]
XP_022959449.1	1.3e-28	91.67	uncharacterized protein LOC111460420 [Cucurbita moschata] >XP_022959450.1 unchar...	[more]
XP_023006006.1	1.3e-28	91.67	uncharacterized protein LOC111498883 [Cucurbita maxima]	[more]

BLAST of PI0026569 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62450.1	2.6e-22	76.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36377:SF1	DNA MISMATCH REPAIR PROTEIN	coord: 1..67
None	No IPR available	PANTHER	PTHR36377	DNA MISMATCH REPAIR PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026569.1	PI0026569.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane