PI0026500 (gene) Melon (PI 482460) v1

Overview


Name	PI0026500
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Methyl-CpG-binding domain-containing protein 11-like
Location	chr02: 19191728 .. 19194019 (+)
RNA-Seq Expression	PI0026500
Synteny	PI0026500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCCTTGTCTCGACGAGCATAGCAAGAGAAAGAAAAATATTGGAGACGATAAAGAAGAATTTGTTGATTCATCCATTGAACACCTTAAATGGGTCCCAAATTCTGACCCCAAATCCCTCTTTTATTTCTCTTTAGGCGCCACAAATTCGCTATTTCTCATCAATTATCCACAACAGATAGCTTTTTGTTGAAACTTAGAGAGTGAGAGACGGCGAGAGCTGTCTTTTGCCTCCTCTCTTTTTTTCATCCTTAGTGGGCATCTCTCTTTTTCCCCCACTCTTCTTTTTCACTACTTTTTGATGAGCTTCTTGATTCTCATTTGATTTGGGACGTTGCAGAACATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATGTTCTGTTCTTGGAATTGCCTGCTCCTCCTGGTTGGAACAAAAAGGTTTCCCCCCCATTTCTTCTTTTTATCTTACATTTTTGTTTCTCCTTTGAACTTCCCTTTGCCCATTTGTTGTGCTGTGAATTTTCTGATACTTCTGAGTTTGAATTTGAAGCTTGATTACATTTATATGGAGGTTAGGGCTAATGGGTATCCTTGGAATTAAGCAGAATTCTATAACACTTATGCTTTGGGGGTTAGGGATTTGAGTTTTTCTCTTTTTCTTTATAGATTCTATTCAACCTATCTTTTTGTTTAGTACACATTAGCCAGTTATCTTTTTGGGGTTTGTTGGAAAAAGTTGGTGTTGGTTCTGTCTCTTTTCTTTGTCATCGTACTTTCTTTTCCTTTTTTTTGTTTATACTTGTTAGAATGTCTTGAATCTCTTATTCGGTGCTCTGAATGATCAAACACAAAGTCTCCTTGCCCGGTTAGCAAGTTGGGGTCCAGGTTGATGCACTCTAATAGGGTTGGGGCGCAACACTTCTAAGCCGAAATTGTATTTATGTTATTTACATTATGATTTTGGTCAAATGGTATAGAAGAGTGGGGTATATGATAACTCTAGATGCATCTCTCTGAATCTGTGGTTTGATATTTTTTCTCTAGAAATAAACTGCTCTCTCCTTTTGCCTATGGACATAGCTAACATATTAGTGTATCACATAATTCACTGTGTTGATTTTGTTCACGTTTTCTATTTATCTTTGATTGTCGTTTTATTAACAATACTCACTGTTTCTCTTAAATGGTTCTTTCTAGTTGGGAGACCTTATTAATATGCAGCTGTTTGGTTTTTAGGTTAATTATAGTGAGGTTGCCTTGGTAGGGTCAATTGTCAACCAAGATAATTTGATTGATGCTAATGAGTTTTCATTAAGTTGAGATAAAATGATGTGAAAAAGTCTTAGTTTATGTGCAGTTTCTGCCCAAGTTAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCACAACAAAAGGCAGCTGGATCAGTATTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCGGCTAGAATTAGTGAGAAGTCAAAGGCAGCTCTCCCCTCACCTCAAATTGAACGGCCTAAGAAACGAACACGAAAACGAAAACAAGCTCTTTCGAAGAAGGATGAGGATAAAGAGACAGTTGTTGTCCCAGGCAGTTTCGAGGAGGCAGGAGTTCATAAGGAAGATGAGACCAATGTCGATAGCGAGGTGAAAGAAATATACGTCAAGGGAAATTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAGACCACCCCTACCCCTGCCAAAATGGTTGATGAGGGGCAGCGAATTGATGGTGACGAACGCCAGAAGCTTGCTGAAACGAAGCAGGGAAGTGAGGGTTCTGAAGATGCAAGAAAGGAAAATAAAAAATTGGAAGGAACAAAAGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAAGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAATCAAAGTTTGACTATATCAGGAGAAATCAAAGTGGAAGAAATAGTAAAAGAGACCAAAGAACATGGTGAAAAGGTAAAAAACTGACACAAATGGAAGTAGCAGTGATAAGAGTCTGTGAAGTGAAATTGATTTACATGTCTAGTTCGAACCGTTTCCGGATTACCCGATTCATATGCTGAGACATATCTATGTAATTATCATTTATAGGATAGTCATTTGTATCTATCTGTATGTACCATCTTTGTATAAACATTTTAGTGTGCAACAATTTTATTGAAGTTGTT

mRNA sequence

TGTCCTTGTCTCGACGAGCATAGCAAGAGAAAGAAAAATATTGGAGACGATAAAGAAGAATTTGTTGATTCATCCATTGAACACCTTAAATGGGTCCCAAATTCTGACCCCAAATCCCTCTTTTATTTCTCTTTAGGCGCCACAAATTCGCTATTTCTCATCAATTATCCACAACAGATAGCTTTTTGTTGAAACTTAGAGAGTGAGAGACGGCGAGAGCTGTCTTTTGCCTCCTCTCTTTTTTTCATCCTTAGTGGGCATCTCTCTTTTTCCCCCACTCTTCTTTTTCACTACTTTTTGATGAGCTTCTTGATTCTCATTTGATTTGGGACGTTGCAGAACATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATGTTCTGTTCTTGGAATTGCCTGCTCCTCCTGGTTGGAACAAAAAGTTTCTGCCCAAGTTAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCACAACAAAAGGCAGCTGGATCAGTATTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCGGCTAGAATTAGTGAGAAGTCAAAGGCAGCTCTCCCCTCACCTCAAATTGAACGGCCTAAGAAACGAACACGAAAACGAAAACAAGCTCTTTCGAAGAAGGATGAGGATAAAGAGACAGTTGTTGTCCCAGGCAGTTTCGAGGAGGCAGGAGTTCATAAGGAAGATGAGACCAATGTCGATAGCGAGGTGAAAGAAATATACGTCAAGGGAAATTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAGACCACCCCTACCCCTGCCAAAATGGTTGATGAGGGGCAGCGAATTGATGGTGACGAACGCCAGAAGCTTGCTGAAACGAAGCAGGGAAGTGAGGGTTCTGAAGATGCAAGAAAGGAAAATAAAAAATTGGAAGGAACAAAAGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAAGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAATCAAAGTTTGACTATATCAGGAGAAATCAAAGTGGAAGAAATAGTAAAAGAGACCAAAGAACATGGTGAAAAGGTAAAAAACTGACACAAATGGAAGTAGCAGTGATAAGAGTCTGTGAAGTGAAATTGATTTACATGTCTAGTTCGAACCGTTTCCGGATTACCCGATTCATATGCTGAGACATATCTATGTAATTATCATTTATAGGATAGTCATTTGTATCTATCTGTATGTACCATCTTTGTATAAACATTTTAGTGTGCAACAATTTTATTGAAGTTGTT

Coding sequence (CDS)

ATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATGTTCTGTTCTTGGAATTGCCTGCTCCTCCTGGTTGGAACAAAAAGTTTCTGCCCAAGTTAGATGGAATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCACAACAAAAGGCAGCTGGATCAGTATTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCGGCTAGAATTAGTGAGAAGTCAAAGGCAGCTCTCCCCTCACCTCAAATTGAACGGCCTAAGAAACGAACACGAAAACGAAAACAAGCTCTTTCGAAGAAGGATGAGGATAAAGAGACAGTTGTTGTCCCAGGCAGTTTCGAGGAGGCAGGAGTTCATAAGGAAGATGAGACCAATGTCGATAGCGAGGTGAAAGAAATATACGTCAAGGGAAATTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAGACCACCCCTACCCCTGCCAAAATGGTTGATGAGGGGCAGCGAATTGATGGTGACGAACGCCAGAAGCTTGCTGAAACGAAGCAGGGAAGTGAGGGTTCTGAAGATGCAAGAAAGGAAAATAAAAAATTGGAAGGAACAAAAGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAAGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAATCAAAGTTTGACTATATCAGGAGAAATCAAAGTGGAAGAAATAGTAAAAGAGACCAAAGAACATGGTGAAAAGGTAAAAAACTGA

Protein sequence

MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVDEGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKESIPEEITAEVQRNNQDELNQSLTISGEIKVEEIVKETKEHGEKVKN

Homology

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BLAST of PI0026500 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.4e-33
Identity = 103/260 (39.62%), Postives = 143/260 (55.00%), Query Frame = 0


Query: 9   GSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGN 68
           G +E+V+ +ELPAP  W K F P   G  KK E++F+APTGEEI N++QL+QYLKSHPGN
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 69  PASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKETVVVP 128
           PA +EFDW T  TPRRSARISEK+KA  PSP  E PKKR R  K  +SKKD + E     
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGR-TKSPVSKKDAEGEK--SE 121

Query: 129 GSFEEAGVHKEDETNVDSEVKE----IYVKGNYENRKLED--ENVKAETTPTPAKMVDEG 188
           G  EE    K+ E N    + E        G+ E  ++ D  EN+ AE TP  A + +EG
Sbjct: 122 GGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG 181

Query: 189 QRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKESIPEEITAEVQR 248
           + +    ++K  ++        D  K+   +E    +  V ++    E+  E+  +E + 
Sbjct: 182 ESM----KEKALDSVDDKSKETDKEKDTGSIE----KNSVDVEKKTVEASDEKKNSEAET 241

Query: 249 NNQDELNQSLTISGEIKVEE 263
            N +E   +    G+ K  E
Sbjct: 242 RNHEENGLTTEAEGKEKTAE 249

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BLAST of PI0026500 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.3e-30
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 0


Query: 12  EDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK+HPGNP  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  SEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKETVVVPGSF 131
           SEF+W TGETPRRS+RIS+K KA  P+P  E      +KR+ +L+KKD +KE        
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKE---PLLKKRRSSLTKKD-NKEAA---EKN 124

Query: 132 EEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETT--PTPAKMVDEGQRIDGDE 191
           EEA V  ++  +VD +       G  EN + E E  K   T      K  +EG++ + ++
Sbjct: 125 EEAAV--KENMDVDKD-------GKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEK 184

Query: 192 RQKLAE-TKQGSEGSEDARKENKKLEGTKGE---EKVQLQNDAKESIPEEITAEVQR 243
             K  E T+ G EG  +  +  K+ EG K E   ++ ++  D KES+ E  T+E+++
Sbjct: 185 VNKEGEKTEAGKEGQTEIAEAEKEKEGEKAEAENKEAEVVRDKKESM-EVDTSELEK 224

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BLAST of PI0026500 vs. ExPASy TrEMBL
Match: A0A1S3B9A2 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103487437 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.0e-95
Identity = 191/219 (87.21%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEK+KA  PSP IERPKKRT  RKQAL KK E
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRT--RKQALLKKFE 120

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
           DKETVVVP  FEEAGVHKEDETNVDSEVKEI V+G YENRKLEDE +KAETTPTPA+M +
Sbjct: 121 DKETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAE 180

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGE 220
           EG++ D DE +KLA+TKQGSEGSEDARKEN+ LEGTKGE
Sbjct: 181 EGRQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

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BLAST of PI0026500 vs. ExPASy TrEMBL
Match: A0A5A7U4J5 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001110 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.0e-95
Identity = 191/219 (87.21%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEK+KA  PSP IERPKKRT  RKQAL KK E
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRT--RKQALLKKFE 120

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
           DKETVVVP  FEEAGVHKEDETNVDSEVKEI V+G YENRKLEDE +KAETTPTPA+M +
Sbjct: 121 DKETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAE 180

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGE 220
           EG++ D DE +KLA+TKQGSEGSEDARKEN+ LEGTKGE
Sbjct: 181 EGRQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

[Close]

BLAST of PI0026500 vs. ExPASy TrEMBL
Match: A0A6J1CUB2 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014413 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.8e-70
Identity = 178/317 (56.15%), Postives = 212/317 (66.88%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST+ K+GS ED+LFLELPAPPGW KKFLPKLDGITKK EIIF+APTGEEI+ KRQL Q
Sbjct: 18  MASTV-KEGSNEDLLFLELPAPPGWKKKFLPKLDGITKKKEIIFLAPTGEEINGKRQLHQ 77

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGNPASSEFDWGTGETPR+SARISE+ KAA P P+IE PKKRT  RK A+SKKD+
Sbjct: 78  YLKSHPGNPASSEFDWGTGETPRKSARISERVKAA-PLPRIEWPKKRT--RKLAVSKKDD 137

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMV- 180
            +  VV+ GS E   VHK+D    +S V +   KGN ENR L+DE+V  ET P PA ++ 
Sbjct: 138 KEADVVLDGSEEARAVHKQDADKYESGVTD--GKGNQENRTLQDEDV--ETAPAPAPVLA 197

Query: 181 -----DEGQRIDGDERQKLAETKQGS-------EGSEDARKENKKLEGTKGEEKVQLQND 240
                +EGQ++DG+E +  AE + GS       EGSEDA K ++ L+GTKGEEKVQLQ+D
Sbjct: 198 SSEPAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDATKGSRNLDGTKGEEKVQLQDD 257

Query: 241 AKESIPEE-------------------------------ITAEVQRNNQDELNQSLTISG 274
           AKE+I  E                               ++ EVQ N  +E N S T SG
Sbjct: 258 AKETIESEDKESILGEKEFENAKQATSPGDKAAICKETMVSVEVQVNEPNEFNPSSTKSG 317

[Close]

BLAST of PI0026500 vs. ExPASy TrEMBL
Match: A0A7N2L1T6 (MBD domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 130/290 (44.83%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAS++E+ G +E+V+ +ELPAPPGW KKFLPK  G  KKNEIIF +PTGEEI +KRQL+Q
Sbjct: 1   MASSVEEAG-REEVVSVELPAPPGWKKKFLPKQSGTPKKNEIIFTSPTGEEIVSKRQLEQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLK+HPG P +SEFDWGTGETPRRSARISEK+KA  P P+ E PKKR+RK   + +KKD+
Sbjct: 61  YLKAHPGGPTASEFDWGTGETPRRSARISEKTKAT-PPPESETPKKRSRK---SSAKKDD 120

Query: 121 DKETVVVPGSFEEAGVHKED-----ETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTP 180
            ++     G+ E   VH ED     + NVD++ +++ VK N E+ K +D + K E  P  
Sbjct: 121 KEKETAPEGTEETKEVHMEDAEKSEKDNVDAKTEKVDVKQNQEDNKAQDTDTKTEAIPPE 180

Query: 181 AKMVDEGQRI--DGDERQKLAETK----------QGSEGSEDARKENKKLEGTKGEEKVQ 240
              V     I  D +E +K +E +          + +EGS+  + EN+KLEG K +EK Q
Sbjct: 181 EGKVGLEGNIPNDAEESKKTSEAELESSKETLVGKEAEGSKVTQNENEKLEGEKVQEKAQ 240

Query: 241 LQNDAKESIPEEITAEVQRNNQDELNQSLTISGEIKVEEIVKETKEHGEK 274
                      E  AE +  + D+      I+GE K+ E+  E KE   +
Sbjct: 241 ---------QPECEAEKEDGSGDQDKADAAIAGEKKI-EVEGEEKERDNR 275

[Close]

BLAST of PI0026500 vs. ExPASy TrEMBL
Match: A0A2N9IV07 (MBD domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56604 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.6e-41
Identity = 123/294 (41.84%), Postives = 171/294 (58.16%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAS++E + ++E+V+ +ELPAPPGW KKFLPK  G  KKNEI+F +PTGEEI +KRQL+Q
Sbjct: 1   MASSVE-EAAREEVVSVELPAPPGWKKKFLPKQSGTPKKNEIVFSSPTGEEIVSKRQLEQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLK+HPG PA SEFDWGTGETPRRSARISEK+KA+ P P  E PK    KR+ +LS K +
Sbjct: 61  YLKAHPGGPAVSEFDWGTGETPRRSARISEKAKAS-PLPDSETPK----KRRTSLSSKKD 120

Query: 121 DKETVVVPGSFEEA------GVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPT 180
           +KE    P   EE          K ++ NVD+E ++  VK N ++ K +D + K E  P 
Sbjct: 121 NKEKETAPEGTEETKEVDMQDAEKSEKDNVDAETEKDAVKQNQDDNKAQDTDTKMEVIPP 180

Query: 181 PAKMVDEGQRI--DGDERQKLAETK----------QGSEGSE--DARKENKKLEGTKGEE 240
               V +   I  D +E +K  E +          + +EGS+  +   EN+KL+G K +E
Sbjct: 181 EEGKVGQEGNIPNDAEESKKAPEVELENSKETLGGKEAEGSKVTENENENEKLDGAKDQE 240

Query: 241 KVQLQNDAKESIPEEITAEVQRNNQDELNQSLTISGEIKVEEIVKETKEHGEKV 275
           K Q           +  AE +  + D+      I+G+ K + + +   EH   V
Sbjct: 241 KAQ---------QPQSEAEKEDGSGDQDKADTAIAGDDKEKSVKENNDEHSADV 279

[Close]

BLAST of PI0026500 vs. NCBI nr
Match: XP_004150031.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 hypothetical protein Csa_019891 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 3.5e-106
Identity = 215/249 (86.35%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKE +LFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGE IHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEGILFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEAIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGNPASSEFDW TGETPRRSARISEK+KA  PSPQIER KKRT  RKQALSKK E
Sbjct: 61  YLKSHPGNPASSEFDWRTGETPRRSARISEKAKATPPSPQIERRKKRT--RKQALSKKVE 120

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
            KETVVVP   EE GVHKEDETNVDSEVKEI+ +  YENRKLEDEN KAETTPTPA+M +
Sbjct: 121 VKETVVVPYGLEEVGVHKEDETNVDSEVKEIHEEEKYENRKLEDENGKAETTPTPAEMAE 180

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKESIPEEITAEV 240
           EG RIDGDE +KLA+TKQGSEGSEDARKEN+ LEGT GEEKVQLQNDAKESI EEITAEV
Sbjct: 181 EGWRIDGDEWEKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESISEEITAEV 240

Query: 241 QRNNQDELN 250
           QRNNQDEL+
Sbjct: 241 QRNNQDELS 247

[Close]

BLAST of PI0026500 vs. NCBI nr
Match: XP_038880161.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 202/259 (77.99%), Postives = 225/259 (86.87%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST EKQGSKEDVLF+ELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIH+KRQLDQ
Sbjct: 1   MASTWEKQGSKEDVLFVELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHSKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGNPASSEFDWGTGETPRRSARISEK+KAA PSPQIERPKKRT  RKQ LS+KD+
Sbjct: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKAAPPSPQIERPKKRT--RKQPLSRKDD 120

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
           +KE  VVP  FEE GVHKE+ET VD +VK+IYV+GN EN KL++ENVK ET PTP ++ +
Sbjct: 121 NKEADVVPDGFEEKGVHKENETEVDGKVKKIYVEGNDENSKLKEENVKDETIPTPIEVAE 180

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKES--------- 240
           EG+ IDGDE +KLAET+Q SEGSE+ARKEN+ LEGTKGEE+VQLQ+DAKES         
Sbjct: 181 EGRGIDGDECEKLAETEQASEGSENARKENQSLEGTKGEEEVQLQDDAKESISTCSKDKA 240

Query: 241 -IPEEITAEVQRNNQDELN 250
            IPEE T EVQRNNQD+LN
Sbjct: 241 AIPEETTVEVQRNNQDQLN 257

[Close]

BLAST of PI0026500 vs. NCBI nr
Match: XP_038880160.1 (methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 202/259 (77.99%), Postives = 225/259 (86.87%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST EKQGSKEDVLF+ELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIH+KRQLDQ
Sbjct: 37  MASTWEKQGSKEDVLFVELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHSKRQLDQ 96

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGNPASSEFDWGTGETPRRSARISEK+KAA PSPQIERPKKRT  RKQ LS+KD+
Sbjct: 97  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKAAPPSPQIERPKKRT--RKQPLSRKDD 156

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
           +KE  VVP  FEE GVHKE+ET VD +VK+IYV+GN EN KL++ENVK ET PTP ++ +
Sbjct: 157 NKEADVVPDGFEEKGVHKENETEVDGKVKKIYVEGNDENSKLKEENVKDETIPTPIEVAE 216

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKES--------- 240
           EG+ IDGDE +KLAET+Q SEGSE+ARKEN+ LEGTKGEE+VQLQ+DAKES         
Sbjct: 217 EGRGIDGDECEKLAETEQASEGSENARKENQSLEGTKGEEEVQLQDDAKESISTCSKDKA 276

Query: 241 -IPEEITAEVQRNNQDELN 250
            IPEE T EVQRNNQD+LN
Sbjct: 277 AIPEETTVEVQRNNQDQLN 293

[Close]

BLAST of PI0026500 vs. NCBI nr
Match: XP_008443980.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >XP_008443981.1 PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0050154.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYK06410.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-95
Identity = 191/219 (87.21%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEK+KA  PSP IERPKKRT  RKQAL KK E
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRT--RKQALLKKFE 120

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVD 180
           DKETVVVP  FEEAGVHKEDETNVDSEVKEI V+G YENRKLEDE +KAETTPTPA+M +
Sbjct: 121 DKETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAE 180

Query: 181 EGQRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGE 220
           EG++ D DE +KLA+TKQGSEGSEDARKEN+ LEGTKGE
Sbjct: 181 EGRQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

[Close]

BLAST of PI0026500 vs. NCBI nr
Match: XP_022144823.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-69
Identity = 178/317 (56.15%), Postives = 212/317 (66.88%), Query Frame = 0


Query: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST+ K+GS ED+LFLELPAPPGW KKFLPKLDGITKK EIIF+APTGEEI+ KRQL Q
Sbjct: 18  MASTV-KEGSNEDLLFLELPAPPGWKKKFLPKLDGITKKKEIIFLAPTGEEINGKRQLHQ 77

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDE 120
           YLKSHPGNPASSEFDWGTGETPR+SARISE+ KAA P P+IE PKKRT  RK A+SKKD+
Sbjct: 78  YLKSHPGNPASSEFDWGTGETPRKSARISERVKAA-PLPRIEWPKKRT--RKLAVSKKDD 137

Query: 121 DKETVVVPGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMV- 180
            +  VV+ GS E   VHK+D    +S V +   KGN ENR L+DE+V  ET P PA ++ 
Sbjct: 138 KEADVVLDGSEEARAVHKQDADKYESGVTD--GKGNQENRTLQDEDV--ETAPAPAPVLA 197

Query: 181 -----DEGQRIDGDERQKLAETKQGS-------EGSEDARKENKKLEGTKGEEKVQLQND 240
                +EGQ++DG+E +  AE + GS       EGSEDA K ++ L+GTKGEEKVQLQ+D
Sbjct: 198 SSEPAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDATKGSRNLDGTKGEEKVQLQDD 257

Query: 241 AKESIPEE-------------------------------ITAEVQRNNQDELNQSLTISG 274
           AKE+I  E                               ++ EVQ N  +E N S T SG
Sbjct: 258 AKETIESEDKESILGEKEFENAKQATSPGDKAAICKETMVSVEVQVNEPNEFNPSSTKSG 317

[Close]

BLAST of PI0026500 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 103/260 (39.62%), Postives = 143/260 (55.00%), Query Frame = 0


Query: 9   GSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGN 68
           G +E+V+ +ELPAP  W K F P   G  KK E++F+APTGEEI N++QL+QYLKSHPGN
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 69  PASSEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKETVVVP 128
           PA +EFDW T  TPRRSARISEK+KA  PSP  E PKKR R  K  +SKKD + E     
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGR-TKSPVSKKDAEGEK--SE 121

Query: 129 GSFEEAGVHKEDETNVDSEVKE----IYVKGNYENRKLED--ENVKAETTPTPAKMVDEG 188
           G  EE    K+ E N    + E        G+ E  ++ D  EN+ AE TP  A + +EG
Sbjct: 122 GGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG 181

Query: 189 QRIDGDERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKESIPEEITAEVQR 248
           + +    ++K  ++        D  K+   +E    +  V ++    E+  E+  +E + 
Sbjct: 182 ESM----KEKALDSVDDKSKETDKEKDTGSIE----KNSVDVEKKTVEASDEKKNSEAET 241

Query: 249 NNQDELNQSLTISGEIKVEE 263
            N +E   +    G+ K  E
Sbjct: 242 RNHEENGLTTEAEGKEKTAE 249

[Close]

BLAST of PI0026500 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-31
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 0


Query: 12  EDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK+HPGNP  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  SEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKETVVVPGSF 131
           SEF+W TGETPRRS+RIS+K KA  P+P  E      +KR+ +L+KKD +KE        
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKE---PLLKKRRSSLTKKD-NKEAA---EKN 124

Query: 132 EEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETT--PTPAKMVDEGQRIDGDE 191
           EEA V  ++  +VD +       G  EN + E E  K   T      K  +EG++ + ++
Sbjct: 125 EEAAV--KENMDVDKD-------GKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEK 184

Query: 192 RQKLAE-TKQGSEGSEDARKENKKLEGTKGE---EKVQLQNDAKESIPEEITAEVQR 243
             K  E T+ G EG  +  +  K+ EG K E   ++ ++  D KES+ E  T+E+++
Sbjct: 185 VNKEGEKTEAGKEGQTEIAEAEKEKEGEKAEAENKEAEVVRDKKESM-EVDTSELEK 224

[Close]

BLAST of PI0026500 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-12
Identity = 81/277 (29.24%), Postives = 132/277 (47.65%), Query Frame = 0


Query: 12  EDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK +      
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKEAAEK 64

Query: 72  SEFDWGTGETPRRSARISEKSKAALPSPQIERPKKRTRKRKQALSKKDEDKET----VVV 131
           +E         + +  + +  K      + E+ K+   +  +A  + +E ++T    V  
Sbjct: 65  NE-----EAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNK 124

Query: 132 PGSFEEAGVHKEDETNVDSEVKEIYVKGNYENRKLEDENVKAETTPTPAKMVDEGQRIDG 191
            G   EAG  KE +T +    KE       E  K E EN +AE      +   E   +D 
Sbjct: 125 EGEKTEAG--KEGQTEIAEAEKE------KEGEKAEAENKEAEV----VRDKKESMEVDT 184

Query: 192 DERQKLAETKQGSEGSEDARKENKKLEGTKGEEKVQLQNDAKESIPEEITAEVQRNNQDE 251
            E +K A + +G+E       E  K+EG K  E  + Q    E+  E+  AE +  N+  
Sbjct: 185 SELEKKAGSGEGAE-------EPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGS 244

Query: 252 L------NQSLTISGEIKVE-----EIVKETKEHGEK 274
           +       Q++T+ GE  ++     +  KE+KE+ EK
Sbjct: 245 VTTEANGEQNVTL-GEPNLDADAEADKGKESKEYDEK 256

The following BLAST results are available for this feature:

BLAST of PI0026500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	5.4e-33	39.62	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	7.3e-30	40.51	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of PI0026500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9A2	1.0e-95	87.21	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7U4J5	1.0e-95	87.21	Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa...	[more]
A0A6J1CUB2	5.8e-70	56.15	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]
A0A7N2L1T6	1.4e-44	44.83	MBD domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9IV07	9.6e-41	41.84	MBD domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56604 PE=4...	[more]

BLAST of PI0026500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150031.1	3.5e-106	86.35	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 ...	[more]
XP_038880161.1	1.4e-99	77.99	methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispi...	[more]
XP_038880160.1	1.4e-99	77.99	methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispi...	[more]
XP_008443980.1	2.2e-95	87.21	PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >...	[more]
XP_022144823.1	1.2e-69	56.15	methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of PI0026500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	3.9e-34	39.62	methyl-CPG-binding domain 11	[more]
AT1G15340.1	5.2e-31	40.51	methyl-CPG-binding domain 10	[more]
AT1G15340.2	4.1e-12	29.24	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 18..80 e-value: 1.6E-9 score: 37.4
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 11..81 score: 12.929438
None	No IPR available	GENE3D	3.30.890.10		coord: 3..124 e-value: 5.5E-10 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..143
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 9..268
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026500.1	PI0026500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding