PI0026460 (gene) Melon (PI 482460) v1

Overview


Name	PI0026460
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NET domain-containing protein
Location	chr06: 19882293 .. 19889098 (-)
RNA-Seq Expression	PI0026460
Synteny	PI0026460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGATTCCCAAGATTCGGATTCAATAAGTGATGATTACCAAGAAGAAGAAGCTTATGTTCCAAGAAAAAGGTTAGAAGAAAGATTTGAAGCTCACGATTACAAAATGAAGATTGATTTGTCGGTTTTTAATGGAAAGAGAGATATCGAATCGTTTCTTGATTGGATCAAGAACACGGAGAGTTTCTTTGATTACATGAATACTCATAAGAAGGTAAAGTTGGTAGCTCTCAAGTTGAAAGGAGAAGCCTCAGCATGGTGGGATCAATTGGAAGTAAATCGTAGAAGACAAGGGAAGAGCTACATTTGTTATTGGGACAAAATGAAGAGATTGATGAAAAAGAGATTTCTTCCTCCCAATTATGAATAAACTTTATACAACCAATATCAAAATTACCGACAAGGGACAAGAAAGATAGTTGATTATGTTGAAGAATTTCACAGATTAAGAGCAAGAACCAACTTGGCAGAAAATGAGCATCACCTAATTGCTAGATTTGTCGGCGGTCTTCGAATGGACATTAAAGAAAAGGTAAAATTCCAAGTTTTTCATTTTTTGGCTGATGCAATTGCTTTTACCGAGGTAGTGGAGGAATTGAATGGGATACGTTCCAAGAATGCCGCAAGAAAAGCAACATGTGAAGCATCCACCAGTAGAAGAATCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCAATCAGCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAATCAAGAAGCTATGATGGAGAAAAAAACAGAAGCAAATGGTAAAAAAAAAGAACAAAATCCTTATGTTCGATCCTTTAAAGGGGTTTGCTATAGGTGTGGTCAAACAAGACATCCTTCAAATACTTGTCCTCAACACAAAACAGTAGCATTCATTGATGAAGAAGATGAAGATTCCATCAAGAACATTGAAGAAAGTGAAGAAGAAGCCAAGATGATTGAACCGAATGATGGCGATAGATTTTCTTGTGTTCTTCAAAGAATCTTGATCACACCAAAGGGAGAATCACACCCCCAATGACATTGTCTTTTCAAGATAAGATGCACCATTAACAACAAGGTTTGCAATGTTATTATTGATAGCGGAAGCAGTGAAAACTTTATCTCCAAGAAAGTAGTGGCAACCTTGAATTTAAAAATAGAAACTCATCTAAGTGCTTACAAGATTGGGTGGGTGAAGAAAGGAAGAGAAGTCCAAGTTAATGAGATTTGTATCGTTCTATTGACAATTGGGAGTAGCTAAAGATCAAATAGTTTGTGACGTTTTGGAGATGGATGTGTGTCACATTCTATTAGGGAGACCGTGGCAATATGATACTCGAGCCTTGCATAAGAGGAGAGAAAATACTTATGAATTTTAGTGGATGGATAAGAAAATAGTGTTGTTGCCTCTAACTAAGAAGGAAGATGAAGGAGTTAATGCCAAGAAGACTAGAAGTAATCATTTGTTTACCACAATTAGTGGAAAGTTGTTAAAAGAAAGAGAATATGATGTTTTAGGACTTGTTGTTGCTGAAAAGTCCATTAAAGATGAAGACAGTGAAGTTCCAAAAGAAGTCCAACAATTGCTTGATGAATTTTTGCAAATTAAGCAAGAATCTGAGGGATTACCACCTTTGAGAAATATTCAACATCACATTAACTTACTTCCGGGGGCTTCACTTCCCAATCTATCTCATTATCGAATGAGCCCTAAAGAATATGAGGATCTACATCAACATTATCAAAGAGCTTCTAAAGAAAGGTATATTCAACCAAGCTTGAGTCCATGTGTCGTGTCGGTCCTTCTTACTCCAAAAAAAGATGGAAGTCGGAGAATGTGTGTAGATAGTCGAGCCATTAACCGCATTACGGTAAACTATCGTTTTTCAATTCCAAGAATTAATGATTTGCTTGATCAACTTGGTGGAGCTTTGATTTTTTCAAAGGTAGATTTAAAGAGTGGATATCATTAAATAAGGATAAGACCGAGAGATGAATGGAAGACAACGTTCAAGACTAATGAAGGACTTTTCGAATGGCTTGTTATGCCATTTGGCCTCTCAAATGCACCAAGCACTTTCATGCGGCTTATGAATCATGTGTTACATCCATTTCCCAACAAGTTTGTGGTGTTTGATGATATCCTAATATATAGCAAAAGCAAAGAAGAACATTTACAGCACCTACATAAAGTATTGCAAGCCTTGAAAGAAGCTGAATTGTACATCAACTTCAAGAAGTGCTCATTCTTGATGAAGGAGATTTCATATCTTGGCTTTCGTATTGGTCAAAATCACATTAAGGTGGATCCGAAGAAGGTAGAAACAGTAATGCAGTGGCCTATTCCATCAAAAGTAAGAGATATACAAGCCTTCTTAGGCCTGACATCCTTCTATCTAAAGTTTATAAAAAAAATTTGCTCAATTACAACTCCTATGAGTGATTGTTAAAGAAAGGAAGTTTTTTTGGGGGCAGAAACAACAAGATAGTTTTGATATTATAAAAGAAAAACTTAGCAGTAGTCCTGTTTTGGAGCTACCAGATTTTTCAGCTCCTTTTGAAGTGGCAGTGGATGCTTGTGGGATTGGCATTGGAGGAGTTTTTTTCTCAACAAGGTCATCCTCTTGAATTTTTTAATGAAAAACTAAGTAGTTCAAGGCAAGCATGTAGTACTTGAGCAAGAATTGTATGCTCTTGTGAGAGCTTTGAAACAATGGGAACATTACCTACTCTCTAAAAATTTTTTGTTGTTAACCGACCATTTTTCGTTGAAATATCTTTGGTCATAGAAGTATATTAGCCGAATGTATGCCAAATGGATCTCATTCATCCAACGATTTGATTTTGTGATTAAACATCAAGCCGACAAGGAAAATAAGATGGTTGATGCTTTGAGCAGAAAAGGGATGTTACTTACAACATTATCCACTAAAGTTGTTGCTTTTAATCATCTCCCAGAATTATATGAAGTTGATGTAGATTTTGAGAAGGTTTGGGAGAAGTGCTCTAATCATGTCAATGTTGGAGATTTCCACATTATAGATGGGTTTCTTTTCAAAGGTGACCTCCTATTCCACATACTTCGCTTCGAGAAGTGCTGATTAAAGAAGCTCACTCAAGAGGGTTACCAGGACATTTTGGCCAAGATAAGACACTTGAGTTAGTTGCTAAGAGATTTTATTGGCCACAAATTCGGAAAGACACTTATAACTTCGTTAAAAGATGCTCTATTTGTCAAAGAGCTAAAGGAACTTCCACAAATGCTAGTTTATATTCACCTTTACCTATCCCAACAACAATTTGGGAGGATCTTTCAACTCATTTTGTACTTGGTCTACCAAAAACTCAAAGGGGTTATGATGCAGTGATGGCTGTAGTAGATAATTTCAGCAAAATGGCTCATTTTTTGGCATGCAAGAAGACCAATGATGTTGTTTATATAGCAAACCTATTCTTTAGAGAGATAGTTTGCCTTCATGGAGTGCCAAAATCCATTTTTTCTGACCGAGATGTGAAATTCCTTAGCCATTTTTGGCGTACTTTATGGAAGAAGTTCGATACAACCCTGAAATTTAGCACTACTTCACATCCACAAATTAATGGACAAACAGAGGTGACAAATAGAACTTTAGGGAATCTTATTCGTTGCTTAAGTGGCTCAAGACCTAAGCAATGGGATTTGCCACTAGCACAAGCAGAGTTTGCTTTCAATATCATGAAGAACTGCTCAACTAGAAAATGCCTATTTGAGATTGTGTACACTCGAGTTCCTAGACTCACATTTGATCTTGCAAATTTTCCATCCTTTGTTGATGTTAGTATTGAAGCTGAAAACATGGTGGAGAGAATAAAAGAATTGCACAGTGAAGTCCATGACCACTTGGAAAAGACAACTAGCTCTTACAAAGAAGCTAAAGACAAGTCTAGAAGAGAAGTTTTGTTTCAGAAAGGGAGATTTTGTGATGATTCACCTAAGGAAGAGTAGATTTCCAACCGGAACATACAACAAATTGAAGGATTGACAGCTTGGCCCATTCAAAGTATTGGAGAAATATGGTAATAATGCATTTGGCATTGAATAACCAAGTGATCTATATATCAACTCTATTTTTAATATTGCTAATTTGAAGCCTTATTTCGCACCAGATGAGTTCCAGTTAGCAGCTTAAGACACCTCGAGATGAGTTTGTTTTTCGAGGGTGGAATATGGTGTACCCGAAAGTGAGAGATAATTGTAATAGAAAAAGAGTTAGTTGAGAAAGTTGTTAGAAGGGTAGTTTTGAGATTTTTTAAATCTTTGTACTTATATTTCTCTATAAATACTTCCCCCTCATGTTTTAGGGAGATATTCATTTGATCAAAAAAACAAACTTTTGGATTTACACCGTATTCCTATGTTGAATAGAAAGGAAAAATCTTTAGATTATATTAGAGTCCTAATTGAGAACATTATTTTTGTTGTAAACTCTATTAGTATTTCTCATTTTTGTCGCATTAGAGAGAGAAAAACAAAATTGTTTATGCTATTACAACTTTAACATCCTCTTAAGATTATTCTTTGTACTGTAAAGATATCTTGAATGAGAGGTGAAAGCAATTGATTGAGTTGTTTTTTTGCTCTTTCAACTGGAAAACCTAAATTGTTAAAAAGAAAACTTAAATATATAGAGTCTAAACCATTAAGAATATCTTTTGTGACTAAAATCTTGCTTTCATAAAAGTTAAACCAAAAACTATTTTCAAGTGTTAACCTAAGGGCTAAGAGGGGGGAAAAAACCTTCCAAAATTGCCAAAAAGACCGATTAAAAAAAATAATAATAAATAAAATCATCGTTCAAAAATCGCGAAGCGCTCAACATTACAAATTCATAACTCATAAGCATAACTATTCGCGCAATTAGTTCCAGTTTTCCACTTCCACTGAATCTGAAGCTTCAATCTGTCACAACGTCCCGCATTTCTCTCTACCGTAATCTTCTCTTCTCTCTCGTTTTTATTTTTCGTTTATTTGGAATTTCAATTGATTTTTGAACTGGTTGATTGAAACTTACTTGTACTTTGATCCGTTTGGTTGCTGAAATGGAAAATTCCCTCTTCGTTTATGGTTTTAAGTTCGTCAGTCTCGTCCTCTTTCTGCTAAGATATGGTGGCTGGTTGTAGAGATTTGATTCTGTTCCTTTGTGTATTCGAGGAATTTTTGTTACTATTTACCTGTAGCTACCTGTTTCTGGTTAACTTACTGAAGAAATCATTGCATATTAAGTGCTTGATAGATCGTTGAATGAGTATTAATTTTCGTTTATGAGATGTTTTATATTTTATATATCGATGTGCTGAGATGGCGATGGTACTTCTCCTCACTTAGAGCTACGGGACTTTGTTGCCTTTAATTGAACACTTCATTAGTTTTGACTTTTAATAATAAGAGAATCGCGATTGTAACGTTTTATAACGATTGAGGAATTTGATTTTGACGATTTGTTTCTTTTCTTCTTTCTGGTTCTTGGTGAAAATTTGGATTGGAAGTGCATTTACTTCTTCTCCTTTGTGGTTACGAGGCATTCATTACTCTTCTGTGTTTGTTTTCTTTTAGCCATTACAAGAATTTATATAAGTTATTTTCATGCGATGCTTTTGGATTTTCAAGATTCTTCACTGATCCTTCTTTGAAATTTGTGGATTTCTTTCTTGAAGGAAGGGCAGTTCAGTTCTCGAATTGCAACTTTGTTAGCTAATTTATAGCAGTGTGCTTTTGCAGCCCTCTGGTGTTGCATTGTTATGTCAAACCATCAATCGGATACAACTGACCAAGATAAATTCGGACCTGATACCTTCTGTTACTTCAAACGGGAAGTAATAGATTTATTATCTCAAGAGGATAATGTACCTTCTCCTCCCCATAATTCACGGATATCTGGAGCTTCACCTCCATTTAGTGATTGCATAGGACCTAAGCTGTCTCATTTTAGAAAGGAAAAGCTGAAGACATTGCTCAGGCAGAGTGTAGTTACTCTCTCGAAAGAAGTAAATGAGGTATACTTGGGTTACAAAATTTTGGTTGTCGATTACAACCTAGCACCGGGCTTGTTATTTGTTTGATAATTTAATAAATTTGTTATGAATTGTGGAGTACACTCCATCTTTTTAGTTATGTTTTGAACTCAATTTAGCACTTGTTAACAAGTAGAAACTTGTTGCTAAAGCATTATACATTAAAGCAGTACCGGAATAGTATTCTCTCAGCATTTAATTGGCACCTTGCTTCCTGATAGATATGATCAGTATTCTTGAAGTTGTTTCCAATGGTCATCCTTTTGATAAAGAAAATGAAATTATATGGATTTGCTTCATCAGAGTCTTTTTTTTTTTTTTTTTTTTGTCATTATGGCTGGAACGTACTCGTCGTATCTTTGATGACAAGGCCACCTGTTTTGACAAGTTCTTTGATCACGGAACTTATATATAGCACTTCTTACCCTCTCTTTAGCTCTTGCAGTCTTACTTCTCTTATTGCCTTGTACAAATGAATCTTGCAATTCTTTTGACGCATAGTTTGCCCTCTTTTGTAATGCCATCTTATCATGAAAGAATTCTATGTTTCTCATAAAAGAAAAGAATAAGGAAAGAAAAAAAAAGTGTGAAGGAGAATTTGCCAAAGATCTAAATATTTTTTTCTAGCTACTTTTGTCTTTTTCTTTCTTTCTTTCTTTAACGTTTGTTAATTGAATGAATGTATTTTCAATTACTGTTGTTGCTATTGTGCTGCAGATGTTTGAGCCTGCTCGATCTACCCAGCGCTTGAAGTAA

mRNA sequence

ATGCAAGATTCCCAAGATTCGGATTCAATAAGTGATGATTACCAAGAAGAAGAAGCTTATGTTCCAAGAAAAAGATTAAGAGCAAGAACCAACTTGGCAGAAAATGAGCATCACCTAATTGCTAGATTTGTCGGCGGTCTTCGAATGGACATTAAAGAAAAGGTAAAATTCCAAGTTTTTCATTTTTTGGCTGATGCAATTGCTTTTACCGAGGTAGTGGAGGAATTGAATGGGATACGTTCCAAGAATGCCGCAAGAAAAGCAACATGTGAAGCATCCACCAGTAGAAGAATCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCAATCAGCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAATCAAGAAGCTATGATGGAGAAAAAAACAGAAGCAAATGGTAAAAAAAAAGAACAAAATCCTTATGTTCGATCCTTTAAAGGGGTTTGCTATAGGTGTGGTCAAACAAGACATCCTTCAAATACTTGTCCTCAACACAAAACAGTAGCATTCATTGATGAAGAAGATGAAGATTCCATCAAGAACATTGAAGAAAGTGAAGAAGAAGCCAAGATGATTGAACCGAATGATGGCGATAGATTTTCTTCCCTCTGGTGTTGCATTGTTATGTCAAACCATCAATCGGATACAACTGACCAAGATAAATTCGGACCTGATACCTTCTGTTACTTCAAACGGGAAGTAATAGATTTATTATCTCAAGAGGATAATGTACCTTCTCCTCCCCATAATTCACGGATATCTGGAGCTTCACCTCCATTTAGTGATTGCATAGGACCTAAGCTGTCTCATTTTAGAAAGGAAAAGCTGAAGACATTGCTCAGGCAGAGTGTAGTTACTCTCTCGAAAGAAGTAAATGAGATGTTTGAGCCTGCTCGATCTACCCAGCGCTTGAAGTAA

Coding sequence (CDS)

ATGCAAGATTCCCAAGATTCGGATTCAATAAGTGATGATTACCAAGAAGAAGAAGCTTATGTTCCAAGAAAAAGATTAAGAGCAAGAACCAACTTGGCAGAAAATGAGCATCACCTAATTGCTAGATTTGTCGGCGGTCTTCGAATGGACATTAAAGAAAAGGTAAAATTCCAAGTTTTTCATTTTTTGGCTGATGCAATTGCTTTTACCGAGGTAGTGGAGGAATTGAATGGGATACGTTCCAAGAATGCCGCAAGAAAAGCAACATGTGAAGCATCCACCAGTAGAAGAATCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCAATCAGCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAATCAAGAAGCTATGATGGAGAAAAAAACAGAAGCAAATGGTAAAAAAAAAGAACAAAATCCTTATGTTCGATCCTTTAAAGGGGTTTGCTATAGGTGTGGTCAAACAAGACATCCTTCAAATACTTGTCCTCAACACAAAACAGTAGCATTCATTGATGAAGAAGATGAAGATTCCATCAAGAACATTGAAGAAAGTGAAGAAGAAGCCAAGATGATTGAACCGAATGATGGCGATAGATTTTCTTCCCTCTGGTGTTGCATTGTTATGTCAAACCATCAATCGGATACAACTGACCAAGATAAATTCGGACCTGATACCTTCTGTTACTTCAAACGGGAAGTAATAGATTTATTATCTCAAGAGGATAATGTACCTTCTCCTCCCCATAATTCACGGATATCTGGAGCTTCACCTCCATTTAGTGATTGCATAGGACCTAAGCTGTCTCATTTTAGAAAGGAAAAGCTGAAGACATTGCTCAGGCAGAGTGTAGTTACTCTCTCGAAAGAAGTAAATGAGATGTTTGAGCCTGCTCGATCTACCCAGCGCTTGAAGTAA

Protein sequence

MQDSQDSDSISDDYQEEEAYVPRKRLRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSATNKSKEVEKDNQEAMMEKKTEANGKKKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFSSLWCCIVMSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

Homology

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BLAST of PI0026460 vs. ExPASy TrEMBL
Match: A0A1S3BNY6 (uncharacterized protein LOC103491717 OS=Cucumis melo OX=3656 GN=LOC103491717 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-43
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MSNHQSDT DQDKFGPDTF YFKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKL
Sbjct: 1   MSNHQSDTADQDKFGPDTFYYFKREVIDLLSQEDNVPSPPQNSQKSGASPPFSDCIGPKL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVVTLSKEVNEMFEPARSTQHLK 97

[Close]

BLAST of PI0026460 vs. ExPASy TrEMBL
Match: A0A5D3DUN6 (NET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00980 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-42
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MSNHQSDT DQDKFGPDTF  FKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKL
Sbjct: 1   MSNHQSDTADQDKFGPDTFYCFKREVIDLLSQEDNVPSPPQNSQKSGASPPFSDCIGPKL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVVTLSKEVNEMFEPARSTQHLK 97

[Close]

BLAST of PI0026460 vs. ExPASy TrEMBL
Match: A0A0A0L8R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-39
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 219 TTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEK 278
           + DQDK  PDTFCYFKREVIDLLSQEDNVPSPPHNS+ISGASPPFSDCIGPKLSHF+KEK
Sbjct: 64  SADQDKLEPDTFCYFKREVIDLLSQEDNVPSPPHNSQISGASPPFSDCIGPKLSHFKKEK 123

Query: 279 LKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           LKTLLRQSVVTLSKEVNEM EPARSTQRLK
Sbjct: 124 LKTLLRQSVVTLSKEVNEMLEPARSTQRLK 153

[Close]

BLAST of PI0026460 vs. ExPASy TrEMBL
Match: A0A5D3C3X9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00540 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 96/218 (44.04%), Postives = 123/218 (56.42%), Query Frame = 0


Query: 26  LRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAA 85
           L AR NL+ENE H IARF+GGLR DIKEK+K Q F FL++AI+F E VEE+N IR+KN +
Sbjct: 309 LGARINLSENEQHQIARFIGGLRFDIKEKIKLQPFRFLSEAISFAETVEEMNAIRTKNPS 368

Query: 86  RKATCEASTSRRINFSSKNKDFVHQSATNKSKEVEKDNQEAMMEKKTEANGKKKEQNPYV 145
                                    S   K KEVE   Q+   +KK E   K K QN Y 
Sbjct: 369 ------------------------TSTQGKGKEVE--TQDLADDKKREVVNKGKVQNKYN 428

Query: 146 RSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFSS 205
           R   G C+RCGQ  HPSNTCPQ KT+A  D+E++ + ++ EE EEEAK+IE +DG R S 
Sbjct: 429 RPSLGKCFRCGQPGHPSNTCPQRKTIALADKEEDSASESSEELEEEAKLIEADDGHRVS- 488

Query: 206 LWCCI--VMSNHQSDTTDQDKFGPDTFCYFKREVIDLL 242
             C I  V+   + +T  Q      T C    +V D++
Sbjct: 489 --CVIQRVLLAPKEETNPQCHSLFKTRCTINGKVCDVI 497

[Close]

BLAST of PI0026460 vs. ExPASy TrEMBL
Match: A0A5D3D655 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00410 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-29
Identity = 93/199 (46.73%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 14  YQEEEAYVPR-KRLRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEV 73
           Y++   Y+    RL ARTNL E+E HLIARF GGLRMD++EKVK Q F +L++ IA+ E 
Sbjct: 79  YRKTAEYIEEFHRLGARTNLMESEQHLIARFTGGLRMDLREKVKLQRFQWLSEVIAYPET 138

Query: 74  VEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSATNKSKEVEKDNQEAMMEKKT 133
           VEE+   +SK   RK   E STS         K+ +   A NK+K +EKD +    EKK 
Sbjct: 139 VEEMVESQSK-FTRKGFWETSTS---------KNTLAPQAINKAKVIEKDKEP---EKKD 198

Query: 134 EANGK-------KKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNI 193
           + N K       KK +NPY R F G CYRCGQ  HPS + PQ KTVAF+D+E+     N 
Sbjct: 199 DHNSKEETTEANKKSRNPYNRPFSGTCYRCGQAGHPSISYPQEKTVAFVDDEELIQGSN- 258

Query: 194 EESEEEAKMIEPNDGDRFS 205
           EE E++A++IE ++GD  S
Sbjct: 259 EEDEQDAELIEADEGDNLS 263

[Close]

BLAST of PI0026460 vs. NCBI nr
Match: XP_011651583.1 (uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus] >KAE8650792.1 hypothetical protein Csa_017467 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 7.3e-44
Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MSNHQSDT DQDK  PDTFCYFKREVIDLLSQEDNVPSPPHNS+ISGASPPFSDCIGPKL
Sbjct: 1   MSNHQSDTADQDKLEPDTFCYFKREVIDLLSQEDNVPSPPHNSQISGASPPFSDCIGPKL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSVVTLSKEVNEM EPARSTQRLK
Sbjct: 61  SHFKKEKLKTLLRQSVVTLSKEVNEMLEPARSTQRLK 97

[Close]

BLAST of PI0026460 vs. NCBI nr
Match: XP_008450000.1 (PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-42
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MSNHQSDT DQDKFGPDTF YFKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKL
Sbjct: 1   MSNHQSDTADQDKFGPDTFYYFKREVIDLLSQEDNVPSPPQNSQKSGASPPFSDCIGPKL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVVTLSKEVNEMFEPARSTQHLK 97

[Close]

BLAST of PI0026460 vs. NCBI nr
Match: KAA0037843.1 (uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa] >TYK27222.1 uncharacterized protein E5676_scaffold236G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-41
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MSNHQSDT DQDKFGPDTF  FKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKL
Sbjct: 1   MSNHQSDTADQDKFGPDTFYCFKREVIDLLSQEDNVPSPPQNSQKSGASPPFSDCIGPKL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVVTLSKEVNEMFEPARSTQHLK 97

[Close]

BLAST of PI0026460 vs. NCBI nr
Match: XP_038893528.1 (uncharacterized protein LOC120082425 isoform X2 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-36
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MS HQSDT DQDK GPDTF YFKREVIDLLSQEDN+PSPPH+S+ISGASPPF D IGP L
Sbjct: 1   MSKHQSDTADQDKLGPDTFSYFKREVIDLLSQEDNLPSPPHDSQISGASPPFGDSIGPNL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSV  LSKEVNEM +PA STQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVAILSKEVNEMLDPALSTQCLK 97

[Close]

BLAST of PI0026460 vs. NCBI nr
Match: XP_038893520.1 (uncharacterized protein LOC120082425 isoform X1 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-36
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 212 MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKL 271
           MS HQSDT DQDK GPDTF YFKREVIDLLSQEDN+PSPPH+S+ISGASPPF D IGP L
Sbjct: 1   MSKHQSDTADQDKLGPDTFSYFKREVIDLLSQEDNLPSPPHDSQISGASPPFGDSIGPNL 60

Query: 272 SHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK 309
           SHF+KEKLKTLLRQSV  LSKEVNEM +PA STQ LK
Sbjct: 61  SHFKKEKLKTLLRQSVAILSKEVNEMLDPALSTQCLK 97

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BLAST of PI0026460 vs. TAIR 10
Match: AT5G40600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 6.9e-08
Identity = 30/85 (35.29%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 213 SNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLS 272
           +   + + + ++ GPD F Y++ +V +LLSQE+ +   PH++ +  A    ++ IG +LS
Sbjct: 83  AEEMTPSLESNRTGPDFFGYYRAQVEELLSQEEKI---PHHNHVD-AKKSSAEIIGAELS 142

Query: 273 HFRKEKLKTLLRQSVVTLSKEVNEM 298
             ++EKL  LLRQ V+    EV+EM
Sbjct: 143 DVKQEKLNALLRQCVLNSIPEVDEM 163

The following BLAST results are available for this feature:

BLAST of PI0026460 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNY6	6.7e-43	92.78	uncharacterized protein LOC103491717 OS=Cucumis melo OX=3656 GN=LOC103491717 PE=...	[more]
A0A5D3DUN6	7.4e-42	91.75	NET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0L8R5	2.6e-39	92.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1	[more]
A0A5D3C3X9	1.4e-32	44.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A5D3D655	1.9e-29	46.73	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0026460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651583.1	7.3e-44	93.81	uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus] >KAE8650792.1 ...	[more]
XP_008450000.1	1.4e-42	92.78	PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo]	[more]
KAA0037843.1	1.5e-41	91.75	uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_038893528.1	1.5e-36	82.47	uncharacterized protein LOC120082425 isoform X2 [Benincasa hispida]	[more]
XP_038893520.1	1.5e-36	82.47	uncharacterized protein LOC120082425 isoform X1 [Benincasa hispida]	[more]

BLAST of PI0026460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40600.1	6.9e-08	35.29	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembr...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..140
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 213..307
None	No IPR available	PANTHER	PTHR45926:SF13	BROMODOMAIN TESTIS-SPECIFIC PROTEIN	coord: 213..307
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 152..167 score: 8.976924

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026460.1	PI0026460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding