PI0026373 (gene) Melon (PI 482460) v1

Overview


Name	PI0026373
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	photosystem II 22 kDa protein, chloroplastic
Location	chr03: 14161644 .. 14163525 (+)
RNA-Seq Expression	PI0026373
Synteny	PI0026373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCGAACAACACCCAATTCACTCGTCTCTTTTTCAGTCCTCTGCCGTCCCACTCTGTTTCTTTGCCGGGGCGTGGTTTCACCACTCTTGCTGTGTTTAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTAATTAATTCATTAATTATTATTTTAAATAAATAAATGGAATTAGAATTGATGGATTTTGATATTGTTTTAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGAACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGTAAGATTTATGGATCTATATGTTTATTATTAAATATAATTTATTTTATTTTATTTATTTTTGGTAAAATTGATAGCTATTTTAACAGATTTGTTGGAGAATGTATAAGACTACCTTTCTAAATCTTTACTACTAAAATCATACAGTATTGTTCTCACATTTGTACCATTTTTTTTCAAGTTCAAAATTCTAAATCATTCTAAATCATTTAGTTTAATTATGAGTTTGTATTTAATATTTTTTTTAATATTTTAAATTTTACATTTAATGAATTTGACCATACTCCTATTCTTTAAAAAAAAAAAAAAATACTTAGTCCATTCAAAACAAATTAAAAATTTATGTCTAATATAACTCTAAATTTAAATTTTCGTATCTAGTAAAATTATTCAACATAAAATTGTGAGTACTAACTTGAAAATTGAAGTTAAAAATTATAAGATTGGCTAAATAAACACTACCCACTACCCTTGAAATTCAGTAGCTAAACTTGTAGTTTAACTAAAGTAACTCAAACGCAGGATTGAATCAAATATATAAAACCTACTCATGAAACTTGTAATTTAACAAAAGTATTATAAAAGATTAGAGTGATGGTGAGGTGGATTTTGTTAGTTTTGGAGTCTAACACAAAACCAAACAGAATGGATGAGTTTTAAAAAGAAGAAATCGAAACTAATGTTGAATAAAGAATAAATGGATGGGTTAGTTTTTTATTTATTTAGGGACACATTTTGATTGGAGTTTGTAATAAAGAGGATGGTATGGGAAAATAAGCATTAAGTGGAGTGGTAAATGTTAGGTTATCTCACACATCGAAACTAAAAAAGAATGGTGAAAAGAATTAGAATAAAGTTAATTGATGGATTTTGATATTTGTGTAAAATTTGCAGGCATCATTGCTAGGAGAGGGGATCACCGGAAAGGGAATTCTAGCACAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTTGGAGACCGTGGAAAATTCATCGACGATCCTGAATCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGACCTTAGGTCTCAAAGAAGGAGGTAATTTTAATTACATCACAAAAAATCAAATCAACTTACTCCATTCTTCTCTTCTCTTCAATTAAATCTAATTTATGATACCTTTGTTCTGTTGAAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTCTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTCGTGTTCTTCTTCATTGCGGCTGTGAATCCTGGGACTGGTAAATTCGTGACGGATGAAGAAGATGATGATTGA

mRNA sequence

ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCGAACAACACCCAATTCACTCGTCTCTTTTTCAGTCCTCTGCCGTCCCACTCTGTTTCTTTGCCGGGGCGTGGTTTCACCACTCTTGCTGTGTTTAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGAACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGCATCATTGCTAGGAGAGGGGATCACCGGAAAGGGAATTCTAGCACAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTTGGAGACCGTGGAAAATTCATCGACGATCCTGAATCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGACCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTCTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTCGTGTTCTTCTTCATTGCGGCTGTGAATCCTGGGACTGGTAAATTCGTGACGGATGAAGAAGATGATGATTGA

Coding sequence (CDS)

ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCGAACAACACCCAATTCACTCGTCTCTTTTTCAGTCCTCTGCCGTCCCACTCTGTTTCTTTGCCGGGGCGTGGTTTCACCACTCTTGCTGTGTTTAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGAACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGCATCATTGCTAGGAGAGGGGATCACCGGAAAGGGAATTCTAGCACAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTTGGAGACCGTGGAAAATTCATCGACGATCCTGAATCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGACCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTCTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTCGTGTTCTTCTTCATTGCGGCTGTGAATCCTGGGACTGGTAAATTCGTGACGGATGAAGAAGATGATGATTGA

Protein sequence

MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD

Homology

[Close]

BLAST of PI0026373 vs. ExPASy Swiss-Prot
Match: Q02060 (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBS PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.0e-109
Identity = 212/278 (76.26%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLR------PNNTQFTRLFFSPLPSHSVSLPGRGFT 60
           MA   +L+  GV   + + LKR   L+         +  + LFFSPLPS S S     F 
Sbjct: 1   MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSS-SSSSTVFK 60

Query: 61  TLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEG 120
           TLA+FKS+ KA PKKVEKPK KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGEG
Sbjct: 61  TLALFKSKAKA-PKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEG 120

Query: 121 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAV 180
           ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D+P   TGLE+AV
Sbjct: 121 ITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEP--TTGLEKAV 180

Query: 181 IPPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240
           IPPGK  RS LGLK  GPLFGFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET
Sbjct: 181 IPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240

Query: 241 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           GVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E++D
Sbjct: 241 GVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEED 274

[Close]

BLAST of PI0026373 vs. ExPASy Swiss-Prot
Match: Q9FPP4 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN=PSBS PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-106
Identity = 209/277 (75.45%), Postives = 226/277 (81.59%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLP----SHSVSLPGRGF--TTL 62
           AQTMLLT+   V   +  K  L  R      + LF   LP    S + +     F  TT+
Sbjct: 2   AQTMLLTANAKV--DLRSKESLVERLKPKPLSSLFLPSLPLRFSSSTTNFSSSKFTSTTV 61

Query: 63  AVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEG 122
           A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE 
Sbjct: 62  ALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 121

Query: 123 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAV 182
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP  ATGLE+AV
Sbjct: 122 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAV 181

Query: 183 IPPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 242
           IPPGKSF+S LGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ET
Sbjct: 182 IPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 241

Query: 243 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           GVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 GVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of PI0026373 vs. ExPASy Swiss-Prot
Match: Q9XF91 (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBS PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-106
Identity = 208/271 (76.75%), Postives = 226/271 (83.39%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGR--GFTTLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF S   +  V+LP R   F  LA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP   TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKN 181

Query: 183 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 242
            RS LGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +
Sbjct: 182 VRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQD 241

Query: 243 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 IEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of PI0026373 vs. ExPASy Swiss-Prot
Match: P54773 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-106
Identity = 209/277 (75.45%), Postives = 225/277 (81.23%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLP----SHSVSLPGRGF--TTL 62
           AQTMLLT+   V   +  K  L  R      + LF   LP    S S +     F  TT+
Sbjct: 2   AQTMLLTANAKV--DLRSKESLVERLKPKPLSSLFLPSLPLRFSSSSTNASSSKFTSTTV 61

Query: 63  AVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEG 122
           A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE 
Sbjct: 62  ALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 121

Query: 123 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAV 182
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP   TGLE+AV
Sbjct: 122 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAV 181

Query: 183 IPPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 242
           IPPGKSF+S LGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ET
Sbjct: 182 IPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 241

Query: 243 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           GVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 GVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of PI0026373 vs. ExPASy Swiss-Prot
Match: Q9SMB4 (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBS PE=2 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.3e-103
Identity = 204/273 (74.73%), Postives = 223/273 (81.68%), Query Frame = 0


Query: 3   AQTMLLTSG--VCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGR-GFTTLAVF 62
           AQTMLLT+   V +     L   L  +P ++ F        PS S S       TT+A+F
Sbjct: 2   AQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLPLKYPSASASASSHFTSTTVALF 61

Query: 63  KSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGK 122
           KS+ KAP KK V KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE ITGK
Sbjct: 62  KSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGK 121

Query: 123 GILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPG 182
           GILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP   TGL++AVIPPG
Sbjct: 122 GILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPG 181

Query: 183 KSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPI 242
           K F+S LGL EGGPLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPI
Sbjct: 182 KGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPI 241

Query: 243 NEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           NEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Sbjct: 242 NEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

[Close]

BLAST of PI0026373 vs. ExPASy TrEMBL
Match: A0A0A0K7N4 (Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.7e-143
Identity = 264/272 (97.06%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPN TQFTRLFF+PLPSHSVSLP RGFTTLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE ITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of PI0026373 vs. ExPASy TrEMBL
Match: A0A5A7UZ08 (Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00970 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 263/272 (96.69%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNN QFTRLFF+PLP+HSVSLP RGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE ITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of PI0026373 vs. ExPASy TrEMBL
Match: A0A1S3CS23 (photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504056 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 263/272 (96.69%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNN QFTRLFF+PLP+HSVSLP RGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE ITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of PI0026373 vs. ExPASy TrEMBL
Match: A0A6J1GLX6 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455493 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.9e-129
Identity = 243/276 (88.04%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNTQFTRLFFSPLPSHSVSLPGRGFTT 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFF+PLPS SVSLP RGF T
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of PI0026373 vs. ExPASy TrEMBL
Match: A0A6J1JV31 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487764 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 242/276 (87.68%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNTQFTRLFFSPLPSHSVSLPGRGFTT 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N Q +RLFF+PLPS SVSLP RGF T
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRP-NAQSSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of PI0026373 vs. NCBI nr
Match: XP_004150442.1 (photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hypothetical protein Csa_018297 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 3.6e-143
Identity = 264/272 (97.06%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPN TQFTRLFF+PLPSHSVSLP RGFTTLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE ITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of PI0026373 vs. NCBI nr
Match: XP_008466710.1 (PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo] >KAA0059887.1 photosystem II 22 kDa protein [Cucumis melo var. makuwa] >TYK24837.1 photosystem II 22 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.1e-143
Identity = 263/272 (96.69%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNN QFTRLFF+PLP+HSVSLP RGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE ITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of PI0026373 vs. NCBI nr
Match: XP_038885143.1 (photosystem II 22 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 501.5 bits (1290), Expect = 4.5e-138
Identity = 257/272 (94.49%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGRGFTTLAVFK 60
           MAAQTMLLTSGVCVGHGV +KREL LRP N QF+RLFF+PLPSHSVSLP RGFTTLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVGVKRELRLRP-NAQFSRLFFNPLPSHSVSLPARGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 120
           SRTKAPPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE ITGKGI
Sbjct: 61  SRTKAPPKKVSKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 180
           LAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVIPPGK+
Sbjct: 121 LAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKN 180

Query: 181 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDD 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD+
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 271

[Close]

BLAST of PI0026373 vs. NCBI nr
Match: XP_022952982.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_023545993.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7032798.1 Photosystem II 22 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.9 bits (1213), Expect = 3.8e-129
Identity = 243/276 (88.04%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNTQFTRLFFSPLPSHSVSLPGRGFTT 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFF+PLPS SVSLP RGF T
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of PI0026373 vs. NCBI nr
Match: XP_022991058.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 468.8 bits (1205), Expect = 3.2e-128
Identity = 242/276 (87.68%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNTQFTRLFFSPLPSHSVSLPGRGFTT 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N Q +RLFF+PLPS SVSLP RGF T
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRP-NAQSSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE ATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RS LGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of PI0026373 vs. TAIR 10
Match: AT1G44575.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-107
Identity = 208/271 (76.75%), Postives = 226/271 (83.39%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGR--GFTTLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF S   +  V+LP R   F  LA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP   TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKN 181

Query: 183 FRSTLGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 242
            RS LGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +
Sbjct: 182 VRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQD 241

Query: 243 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 IEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of PI0026373 vs. TAIR 10
Match: AT1G44575.2 (Chlorophyll A-B binding family protein )

HSP 1 Score: 252.3 bits (643), Expect = 4.4e-67
Identity = 141/191 (73.82%), Postives = 152/191 (79.58%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNTQFTRLFFSPLPSHSVSLPGR--GFTTLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF S   +  V+LP R   F  LA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPESATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP   TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKN 181

Query: 183 FRSTLGLKEGG 192
            RS LGLKE G
Sbjct: 182 VRSALGLKEQG 184

The following BLAST results are available for this feature:

BLAST of PI0026373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02060	6.0e-109	76.26	Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSB...	[more]
Q9FPP4	1.2e-106	75.45	Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN...	[more]
Q9XF91	1.6e-106	76.75	Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P54773	1.6e-106	75.45	Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=...	[more]
Q9SMB4	1.3e-103	74.73	Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSB...	[more]

BLAST of PI0026373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7N4	1.7e-143	97.06	Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1	[more]
A0A5A7UZ08	2.9e-143	96.69	Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CS23	2.9e-143	96.69	photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1GLX6	1.9e-129	88.04	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JV31	1.6e-128	87.68	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of PI0026373 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150442.1	3.6e-143	97.06	photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hyp...	[more]
XP_008466710.1	6.1e-143	96.69	PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo] >KAA00598...	[more]
XP_038885143.1	4.5e-138	94.49	photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022952982.1	3.8e-129	88.04	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_02354...	[more]
XP_022991058.1	3.2e-128	87.68	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of PI0026373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44575.1	1.2e-107	76.75	Chlorophyll A-B binding family protein	[more]
AT1G44575.2	4.4e-67	73.82	Chlorophyll A-B binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 132..242 e-value: 7.3E-7 score: 31.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 35..131 e-value: 1.1E-5 score: 27.5
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 86..216 e-value: 7.5E-9 score: 36.3
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 194..257 coord: 3..184
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 194..257
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 3..184
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 84..134
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 128..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026373.1	PI0026373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding