PI0026344 (gene) Melon (PI 482460) v1

Overview


Name	PI0026344
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposase
Location	chr06: 15489696 .. 15490890 (+)
RNA-Seq Expression	PI0026344
Synteny	PI0026344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGATCAAAGCTATGAAACATGGATTTTTCATGGTGAATCATTACCAATCGAGAGTGGCAATGCGCATGTGTCTAATATTTCAAGAGAAAAAGTTGATACAAGAGGTAAGTAAATGACAATTTACATTACTCTACTACTTTTTAGTTCGTACTCAATGCATATTAAAAATATTATTTATTCTAGTTACCATTGGTTATTGATTGTCATCAATCTTCAAGAAAAATGTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCATGGTGTTATAAATGTGTAAGTGCATTAGACTTTCTTAATTGTTAATTTAATGTTTATGACGTACTAACTTTCAAAATTTCTAGTGGATTGAAAATTTGGCAATCTAAACATGATCTCCAACATTATTGATCAAATCCACAATGCAAACTTATGAAGGTAAAATTGTATTCCATAATTGAGTAAATATTTCATTTAGTTGAGATATATGAATGCATTGTTTTTAGCTTATTCGCATGTAGTGTCCTCGTCAATTGGACTCTATAGGGTGCTGGTACTATGTCCAAAAGTACATACGTGAAATAGTGCATAATCGTAGCACTCCTATGAGTATGCTCGTAAGTAAATTATTTATTTACTTGTCTTACGATTTAATATAAGCTATTTAAACTTATGTTGTGTTTGTCTATCTTATTCTTTGTAGTTCAATACAAAAAATACATATAAGCAAGAAGAAATTGATGAGGTTCGAACAGAATGGGCAAGTTTTGTTGGACGATTTGTGTAAGTCGAGATGAGTAATATCTTCTTTTTTTTGTAGAAGTACTAATATGTACTCTTTTTGTGGAAGTACTAAAATGATTTTTGTGGAAGTACTAAAATATGGTGGAGAATCGGAAGTACTAAAATGATTTTTGTGGAAGTACTAGAATGTAGTGGAGGGATGAATGATTATCTATGTATAGAAGTGCTTGGTGTGGAGGAGCGGGTGGTGCCATATGTGATATGTAGGATTCTTGATGTAATTGCTTAATTGTAGCTTCAAATGCTCATATATGTAAGAGTTTTGAAATGTGAAAGTACTAATGGTGGTTTGGTGGAAATACTAAATTTTTTGCAATGTGAATGCTCATTTTTATATTATAGAAGTGCTTGTGGTATTTCTGATTGTAGTTTGTGAAGGATGGTGACATTTGA

mRNA sequence

ATGGGATTGATCAAAGCTATGAAACATGGATTTTTCATGGTGAATCATTACCAATCGAGAGTGGCAATGCGCATGTGTCTAATATTTCAAGAGAAAAAGTTGATACAAGAGTGTCCTCGTCAATTGGACTCTATAGGGTGCTGGTACTATGTCCAAAAGTACATACGTGAAATAGTGCATAATCGTAGCACTCCTATGAGTATGCTCTTCAATACAAAAAATACATATAAGCAAGAAGAAATTGATGAGGTTCGAACAGAATGGGCAAGTTTTGTTGGACGATTTGTTGGAGGGATGAATGATTATCTATGTATAGAAGTGCTTGGTGTGGAGGAGCGGGTGGTGCCATATGTGATATGTAGGATTCTTGATTTTGTGAAGGATGGTGACATTTGA

Coding sequence (CDS)

ATGGGATTGATCAAAGCTATGAAACATGGATTTTTCATGGTGAATCATTACCAATCGAGAGTGGCAATGCGCATGTGTCTAATATTTCAAGAGAAAAAGTTGATACAAGAGTGTCCTCGTCAATTGGACTCTATAGGGTGCTGGTACTATGTCCAAAAGTACATACGTGAAATAGTGCATAATCGTAGCACTCCTATGAGTATGCTCTTCAATACAAAAAATACATATAAGCAAGAAGAAATTGATGAGGTTCGAACAGAATGGGCAAGTTTTGTTGGACGATTTGTTGGAGGGATGAATGATTATCTATGTATAGAAGTGCTTGGTGTGGAGGAGCGGGTGGTGCCATATGTGATATGTAGGATTCTTGATTTTGTGAAGGATGGTGACATTTGA

Protein sequence

MGLIKAMKHGFFMVNHYQSRVAMRMCLIFQEKKLIQECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFVGGMNDYLCIEVLGVEERVVPYVICRILDFVKDGDI

Homology

[Close]

BLAST of PI0026344 vs. ExPASy TrEMBL
Match: A0A5A7VGQ2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1470 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1529

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1530 ---RVERCADILGV 1540

[Close]

BLAST of PI0026344 vs. ExPASy TrEMBL
Match: A0A5D3CV07 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001190 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1478 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1537

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1538 ---RVERCADILGV 1548

[Close]

BLAST of PI0026344 vs. ExPASy TrEMBL
Match: A0A5D3B8X4 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00870 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1470 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1529

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1530 ---RVERCADILGV 1540

[Close]

BLAST of PI0026344 vs. ExPASy TrEMBL
Match: A0A5A7SYF2 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00460 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37  ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
           +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 807 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 866

Query: 97  GGMNDYLCIEVLGV 111
                  C ++LGV
Sbjct: 867 ---RVERCADILGV 877

[Close]

BLAST of PI0026344 vs. ExPASy TrEMBL
Match: A0A5A7VA55 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00190 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1175 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1234

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1235 ---RVERCADILGV 1245

[Close]

BLAST of PI0026344 vs. NCBI nr
Match: TYK14811.1 (uncharacterized protein E5676_scaffold1081G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37  ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
           +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 298 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 357

Query: 97  GGMNDYLCIEVLGV 111
                  C ++LGV
Sbjct: 358 ---RVERCADILGV 368

[Close]

BLAST of PI0026344 vs. NCBI nr
Match: KAA0066494.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1470 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1529

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1530 ---RVERCADILGV 1540

[Close]

BLAST of PI0026344 vs. NCBI nr
Match: TYK15068.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1478 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1537

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1538 ---RVERCADILGV 1548

[Close]

BLAST of PI0026344 vs. NCBI nr
Match: KAA0034916.1 (uncharacterized protein E6C27_scaffold103G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37  ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
           +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 807 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 866

Query: 97  GGMNDYLCIEVLGV 111
                  C ++LGV
Sbjct: 867 ---RVERCADILGV 877

[Close]

BLAST of PI0026344 vs. NCBI nr
Match: TYJ95577.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-20
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 37   ECPRQLDSIGCWYYVQKYIREIVHNRSTPMSMLFNTKNTYKQEEIDEVRTEWASFVGRFV 96
            +CPRQLDS+GC YYVQKYI EIVHN ST ++ LFNTKN Y+QEEIDE+RTEWA+FV RFV
Sbjct: 1470 KCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1529

Query: 97   GGMNDYLCIEVLGV 111
                   C ++LGV
Sbjct: 1530 ---RVERCADILGV 1540

The following BLAST results are available for this feature:

BLAST of PI0026344 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGQ2	2.0e-20	67.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=...	[more]
A0A5D3CV07	2.0e-20	67.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001190 PE...	[more]
A0A5D3B8X4	2.0e-20	67.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00870 PE...	[more]
A0A5A7SYF2	2.0e-20	67.57	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7VA55	2.0e-20	67.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00190 PE...	[more]

BLAST of PI0026344 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14811.1	4.1e-20	67.57	uncharacterized protein E5676_scaffold1081G00120 [Cucumis melo var. makuwa]	[more]
KAA0066494.1	4.1e-20	67.57	transposase [Cucumis melo var. makuwa]	[more]
TYK15068.1	4.1e-20	67.57	transposase [Cucumis melo var. makuwa]	[more]
KAA0034916.1	4.1e-20	67.57	uncharacterized protein E6C27_scaffold103G00460 [Cucumis melo var. makuwa]	[more]
TYJ95577.1	4.1e-20	67.57	transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0026344 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026344.1	PI0026344.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008234	cysteine-type peptidase activity