PI0026280 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGTTTTAGAAGAAACGATCCACAAAGTATCTCCTACAACTCTAGATGGAGGGACCATCCAAATCTTAGGGAGGGTCCTCAAGAACCTAAACCTACCAACACTTCTTCTTCCTCATCATCATCACAAGGTACGTACTTAGAAGAGATCATTTCTAAATTAGCTCTTAGCTCAAATAGTTTCAAAATCGATTTTGAGAAAAATTTAGCTAAATTTAGTGAATAAACCGTTAATACATCTGGAGCCATTAGAAGTGACATAGATACTTTGAAAGCATCAATCATTGAGTTAGGGAATAAGTTTAATCAATTAGCAACACATGTCCTTAAAACAGAAGGAAAAAGCAAACTTCCCTCCCAACCTAACCATGAAAATGTGAGTGCTATCACTTTAAGAAGTAGCAAAATTTTGAATAAAAATGATGATATCTCCTTGACTCAAAGTGATCCAAATTTAGAAAAAGTCGATTCTAATGAAAAAAATGTACATACTAACCATTCTTCATCTAATGTTTCTTCTTCCTCTAATGTTTCTTCTTCCAATAATGATTCAAGAGACTTAGATGCTAATCCTCCATTTCCTTCTGGGCTTGCACCACCAAGGAAGGAAATCAAGAATGACGATGAAGTCTTCAAGAAGGTAGAAGTGAACCTTCCTCTCTTGACGGCAATCAAGAGCATATCGAGGTAGCAAAGTTTCTCAAAAAACTATGTACTCACAAGAGGAGGAGTAGGAGCCAAGAAAAAGCAACGGTTAGTAGAAATGTATCTTCTCTTTTAAAGAAAAATCTTCCAGAAAAATGTGTCGACCCAGGTATGTTTTCGCTCCCTTGTACAATAGGAAATAGAGACATATCTAGTGCAATGCTTGATCTAGGTGCATCCATTAATGTCATGCCTTTTAGCGTTTTCAAATACTTAGGACTAAATGGACTTGAAAAGACTAGTATATGCATACAATTAGCCTATCGGTCCTTCATTTCACCATTAAGGGTTGTAGAAGATGTCCTAGTTAAGGTAGGAAATCTAATATTCCCCGTTGATTTTTATATAATAGAAATGAACAATGAATATGCACGTACCTCACCTACCGTACTTTTAGGGAGACCATTCTTGAAAACCACTAAAGCCATAATCAACATAGATAAAGGCCTTCTTAGTGTTGAGTTTGACGGTGATATAGTGTCTTTCAATATTTTTTATGATGTAAAGTCTTCTAATGATCGGGTGTCATTGTGTGCACTTAATACTTTAGAATCATTAGAGTCATTAGAGACACTAGAAGAGCATGACAAAATTAATGAGTTTATTGATCAAGCAATTTTAGAGTACGTTGATAATGAATTTGCCAAGAACGAACCTAGTAATGATGATCTTTCTATTTTTCTTGACTTTGTTGGATGTGTAAATCAAGAACATGTTTTAGTTAATGGATTCGCACTTAATGGACAACATGTATCTAATAATGATTCTGCATATACCAATGAGCATGGCTTAGGTAAAAACCTTGATATAGATGATGAGCTTATTTTAGAATGCATTGACATTGATGATAGGCAAGACATAGACTTCCACAGTAAAGTTCGTTGA ATGGGAGGTTTTAGAAGAAACGATCCACAAAGTATCTCCTACAACTCTAGATGGAGGGACCATCCAAATCTTAGGGAGGGTCCTCAAGAACCTAAACCTACCAACACTTCTTCTTCCTCATCATCATCACAAGAATCATTAGAGTCATTAGAGACACTAGAAGAGCATGACAAAATTAATGAGTTTATTGATCAAGCAATTTTAGAGTACGTTGATAATGAATTTGCCAAGAACGAACCTAGTAATGATGATCTTTCTATTTTTCTTGACTTTGTTGGATGTGTAAATCAAGAACATGTTTTAGTTAATGGATTCGCACTTAATGGACAACATGTATCTAATAATGATTCTGCATATACCAATGAGCATGGCTTAGGTAAAAACCTTGATATAGATGATGAGCTTATTTTAGAATGCATTGACATTGATGATAGGCAAGACATAGACTTCCACAGTAAAGTTCGTTGA ATGGGAGGTTTTAGAAGAAACGATCCACAAAGTATCTCCTACAACTCTAGATGGAGGGACCATCCAAATCTTAGGGAGGGTCCTCAAGAACCTAAACCTACCAACACTTCTTCTTCCTCATCATCATCACAAGAATCATTAGAGTCATTAGAGACACTAGAAGAGCATGACAAAATTAATGAGTTTATTGATCAAGCAATTTTAGAGTACGTTGATAATGAATTTGCCAAGAACGAACCTAGTAATGATGATCTTTCTATTTTTCTTGACTTTGTTGGATGTGTAAATCAAGAACATGTTTTAGTTAATGGATTCGCACTTAATGGACAACATGTATCTAATAATGATTCTGCATATACCAATGAGCATGGCTTAGGTAAAAACCTTGATATAGATGATGAGCTTATTTTAGAATGCATTGACATTGATGATAGGCAAGACATAGACTTCCACAGTAAAGTTCGTTGA MGGFRRNDPQSISYNSRWRDHPNLREGPQEPKPTNTSSSSSSSQESLESLETLEEHDKINEFIDQAILEYVDNEFAKNEPSNDDLSIFLDFVGCVNQEHVLVNGFALNGQHVSNNDSAYTNEHGLGKNLDIDDELILECIDIDDRQDIDFHSKVR Homology
BLAST of PI0026280 vs. ExPASy TrEMBL
Match: A0A5D3CW21 (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00170 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38 Identity = 100/185 (54.05%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of PI0026280 vs. ExPASy TrEMBL
Match: A0A5A7V4I7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00430 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of PI0026280 vs. ExPASy TrEMBL
Match: A0A5D3DU65 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold394G00010 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24 Identity = 61/100 (61.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of PI0026280 vs. ExPASy TrEMBL
Match: A0A5D3D5G7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00040 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22 Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of PI0026280 vs. ExPASy TrEMBL
Match: A0A5A7TE46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00410 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22 Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of PI0026280 vs. NCBI nr
Match: KAA0042324.1 (Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] >TYK15448.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]) HSP 1 Score: 168.3 bits (425), Expect = 5.2e-38 Identity = 100/185 (54.05%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of PI0026280 vs. NCBI nr
Match: KAA0063162.1 (hypothetical protein E6C27_scaffold381G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of PI0026280 vs. NCBI nr
Match: KAA0066481.1 (Retrotransposon gag protein [Cucumis melo var. makuwa] >TYK27317.1 Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 121.3 bits (303), Expect = 7.2e-24 Identity = 61/100 (61.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of PI0026280 vs. NCBI nr
Match: KAA0041704.1 (uncharacterized protein E6C27_scaffold67G00370 [Cucumis melo var. makuwa] >TYK06328.1 uncharacterized protein E5676_scaffold594G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-22 Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of PI0026280 vs. NCBI nr
Match: KAA0050551.1 (uncharacterized protein E6C27_scaffold673G00050 [Cucumis melo var. makuwa] >TYK18791.1 uncharacterized protein E5676_scaffold945G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-22 Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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