PI0026267 (gene) Melon (PI 482460) v1

Overview


Name	PI0026267
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 20160303 .. 20160825 (+)
RNA-Seq Expression	PI0026267
Synteny	PI0026267

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCAAGTCGCAAAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGTCATTTTAGCGCCATCGATGACAATGGCCAACACGACAACTGCAGCAGCTAGTCCATCAGTTCCCCAAAATTTCTCCTTTCTAAAATGTGCTCCTTTTATTTTCGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTCTAAGCTTAACGGCTGTGCACCCGAAATTTATCAAAAGATTCCTTCTTCTGACATGGATGTGATTAAGAAGATTTGTGGTTTGTGAGGAGATTTTAACTTCGAGTTAAAACATGATGAATAAGAATGTTATATGATAATGAGTTTGTTTTTTTTTTTTTTCTTTTTTTTCTACAGTTCTATGTTCTTACAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTTCTTATCCTATTGA

mRNA sequence

ATGGCAGCCAAGTCGCAAAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGTCATTTTAGCGCCATCGATGACAATGGCCAACACGACAACTGCAGCAGCTAGTCCATCAGTTCCCCAAAATTTCTCCTTTCTAAAATGTGCTCCTTTTATTTTCGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTCTAAGCTTAACGGCTGTGCACCCGAAATTTATCAAAAGATTCCTTCTTCTGACATGGATGTGATTAAGAAGATTTGTGTTCTATGTTCTTACAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTTCTTATCCTATTGA

Coding sequence (CDS)

ATGGCAGCCAAGTCGCAAAACGTATCCGCAATGAAGCTCGTGCTTGTATTTCTTGTCTGCATAGTCATTTTAGCGCCATCGATGACAATGGCCAACACGACAACTGCAGCAGCTAGTCCATCAGTTCCCCAAAATTTCTCCTTTCTAAAATGTGCTCCTTTTATTTTCGAAGCAACGTTGTGTGTGACAGATGTTATCAAGTTTCCAATTGCTCCTCATCCTTCTTGTTGCAAAGCCATTTCTAAGCTTAACGGCTGTGCACCCGAAATTTATCAAAAGATTCCTTCTTCTGACATGGATGTGATTAAGAAGATTTGTGTTCTATGTTCTTACAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTAAGGAGGGAGTGGGTTTTGTTGGAGCAAAATTTGTTCTTATCCTATTGA

Protein sequence

MAAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASPSVPQNFSFLKCAPFIFEATLCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVLCSYKICKEGVGFVGAKFVRREWVLLEQNLFLSY

Homology

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BLAST of PI0026267 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.2e-44
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MAAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASPSVPQNFSFLKCAPFIFEATL 60
           MAA+S NVSAMKLVLVFLVCI ILAPS TMA+TT AA SPSVPQNF FLKCAPFI EATL
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           CVTDVIKFPIAPHPSCCKAISKLN CAPEIYQKIPS DMDVIKKIC L
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of PI0026267 vs. ExPASy TrEMBL
Match: A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37
Identity = 84/98 (85.71%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 11  MKLVLVFLVCIVILAPSMTMANTTTAAASPSVPQNFSFLKCAPFIFEATLCVTDVIKFPI 70
           MKLVLVFLVCI ILAPS TMA TT AA SPSVPQNF FLKCAPFI EATLCVT VIKFPI
Sbjct: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 71  APHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           APHPSCCKAISKL  CAP+IYQKIPSSDM+VIKK C L
Sbjct: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of PI0026267 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.9e-27
Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 2   AAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASP---SVPQNFSFLKCAPFIFEA 61
           AAKS + S ++L LVFLVCIVILAPS+T A+T   A SP    + Q+ SF  CAPFI EA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           T+C+ DVIK P+APHPSCCKAIS LN CAPEIYQ IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

[Close]

BLAST of PI0026267 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.6e-26
Identity = 72/110 (65.45%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 2   AAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASP---SVPQNFSFLKCAPFIFEA 61
           AAKS + S ++L LVFLVCIVILAPS+T A+T   A SP    + Q+ SF  CAPFI EA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           T+C+ DVIK P+APHPSCCKAIS LN CAPEIY  IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

[Close]

BLAST of PI0026267 vs. ExPASy TrEMBL
Match: A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.8e-25
Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 1   MAAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAA-SPSVPQNFSFLKCAPFIFEAT 60
           MA KS   S +K   VF+V I ILA S+T   T ++    PS+ QN SF  CAPFIF+ T
Sbjct: 1   MAVKSLKASPIKSASVFIVSIAILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVT 60

Query: 61  LCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKIC 107
           LC+ DV KFPI+PHP CCKAI KLN CAP ++Q IP +DMDVIKKIC
Sbjct: 61  LCLVDVFKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKIC 107

[Close]

BLAST of PI0026267 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-43
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MAAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASPSVPQNFSFLKCAPFIFEATL 60
           MAA+S NVSAMKLVLVFLVCI ILAPS TMA+TT AA SPSVPQNF FLKCAPFI EATL
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           CVTDVIKFPIAPHPSCCKAISKLN CAPEIYQKIPS DMDVIKKIC L
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of PI0026267 vs. NCBI nr
Match: TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-37
Identity = 84/98 (85.71%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 11  MKLVLVFLVCIVILAPSMTMANTTTAAASPSVPQNFSFLKCAPFIFEATLCVTDVIKFPI 70
           MKLVLVFLVCI ILAPS TMA TT AA SPSVPQNF FLKCAPFI EATLCVT VIKFPI
Sbjct: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 71  APHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           APHPSCCKAISKL  CAP+IYQKIPSSDM+VIKK C L
Sbjct: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of PI0026267 vs. NCBI nr
Match: TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-26
Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 2   AAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASP---SVPQNFSFLKCAPFIFEA 61
           AAKS + S ++L LVFLVCIVILAPS+T A+T   A SP    + Q+ SF  CAPFI EA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           T+C+ DVIK P+APHPSCCKAIS LN CAPEIYQ IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

[Close]

BLAST of PI0026267 vs. NCBI nr
Match: KAA0050064.1 (hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 5.4e-26
Identity = 72/110 (65.45%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 2   AAKSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAASP---SVPQNFSFLKCAPFIFEA 61
           AAKS + S ++L LVFLVCIVILAPS+T A+T   A SP    + Q+ SF  CAPFI EA
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEA 62

Query: 62  TLCVTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           T+C+ DVIK P+APHPSCCKAIS LN CAPEIY  IP   MDVIKKIC L
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

[Close]

BLAST of PI0026267 vs. NCBI nr
Match: KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-25
Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 4   KSQNVSAMKLVLVFLVCIVILAPSMTMANTTTAAAS--PSVPQNFSFLKCAPFIFEATLC 63
           KS   S MKL LVF+V I ILA S T   T  ++ +  PS+ Q+ SF  C PFI +ATLC
Sbjct: 1   KSLKASPMKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLC 60

Query: 64  VTDVIKFPIAPHPSCCKAISKLNGCAPEIYQKIPSSDMDVIKKICVL 109
           + DV KFPIAPHP CCKAI KLN CAP ++Q IPS+DMDV+K IC L
Sbjct: 61  LVDVFKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNICAL 107

The following BLAST results are available for this feature:

BLAST of PI0026267 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026267 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9A1	6.2e-44	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CGK9	1.9e-37	85.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CGL7	6.9e-27	66.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4A7	2.6e-26	65.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U2L3	3.8e-25	58.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0026267 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050069.1	1.3e-43	88.89	hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034...	[more]
TYK10334.1	4.0e-37	85.71	hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]	[more]
TYK10344.1	1.4e-26	66.36	hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa]	[more]
KAA0050064.1	5.4e-26	65.45	hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa]	[more]
KAE8653023.1	3.5e-25	58.88	hypothetical protein Csa_023561, partial [Cucumis sativus]	[more]

BLAST of PI0026267 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026267.1	PI0026267.1	mRNA