PI0026206 (gene) Melon (PI 482460) v1

Overview


Name	PI0026206
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc-finger homeodomain protein 9-like
Location	chr12: 1744703 .. 1745697 (+)
RNA-Seq Expression	PI0026206
Synteny	PI0026206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCATTAGGGCTTGTTTGGCATCCCCCAAAAAAGCACCATATCCCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAACTTTTATTTTTCAAAAGAAAAAGAAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACTCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTTACCTATATCGCCGGCGGCGGCCGCTCCTCCGCCGCCACCGCCACCGACGACGACTTCATGGATTATGACCGTCACGCCGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTTCGTACGAAGTTCACGGTGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTCTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTAATTAAATTAATTAATCTTTATGTTAATGTGATAAATTAGAGTATAAAATATTAGAGGCCTAATTTTTCTTTCTTCCTTTTCAGATCTCTTTGTTATTCTTGCTAAAAAGGGTCTAGTCTATATATCAATATATTGCCTTTTTGTTGTAATATAAAAACTAATTTTCTTAAGCACAAAAAAGAAAAGTGTATGTCTTTCTCTTTTTTATTTTTTCCCTTTTTTAAGTTTATTTTTTGTGTTTATTTTTTCCAATTTTTTTCATGAAAACTGACACTGACCCATGCATAGAACAGACGACAGGCTCTGATCTCTGAATTATTGACCA

mRNA sequence

CTCTCATTAGGGCTTGTTTGGCATCCCCCAAAAAAGCACCATATCCCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAACTTTTATTTTTCAAAAGAAAAAGAAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACTCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTTACCTATATCGCCGGCGGCGGCCGCTCCTCCGCCGCCACCGCCACCGACGACGACTTCATGGATTATGACCGTCACGCCGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTTCGTACGAAGTTCACGGTGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTCTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTAATTAAATTAATTAATCTTTATGTTAATGTGATAAATTAGAGTATAAAATATTAGAGGCCTAATTTTTCTTTCTTCCTTTTCAGATCTCTTTGTTATTCTTGCTAAAAAGGGTCTAGTCTATATATCAATATATTGCCTTTTTGTTGTAATATAAAAACTAATTTTCTTAAGCACAAAAAAGAAAAGTGTATGTCTTTCTCTTTTTTATTTTTTCCCTTTTTTAAGTTTATTTTTTGTGTTTATTTTTTCCAATTTTTTTCATGAAAACTGACACTGACCCATGCATAGAACAGACGACAGGCTCTGATCTCTGAATTATTGACCA

Coding sequence (CDS)

ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACTCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTTACCTATATCGCCGGCGGCGGCCGCTCCTCCGCCGCCACCGCCACCGACGACGACTTCATGGATTATGACCGTCACGCCGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTTCGTACGAAGTTCACGGTGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTCTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ

Homology

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BLAST of PI0026206 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-35
Identity = 80/175 (45.71%), Postives = 100/175 (57.14%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDFMDYDRHAVVEY-----------AAADTE-----RSGGGSKKRFR 122
            GG      T  +     +     +             A+ D E      S GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 162
           TKFT +QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

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BLAST of PI0026206 vs. ExPASy Swiss-Prot
Match: A2XLF4 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-34
Identity = 85/183 (46.45%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK------VTYIA 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GG-GRSSAATAT---------DDDFMDYDRHAVVEYAAADTERSGG-GSKKRFRTKFTVD 129
           GG G +    A             +M               +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSA 171
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

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BLAST of PI0026206 vs. ExPASy Swiss-Prot
Match: Q10DV5 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-34
Identity = 85/183 (46.45%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK------VTYIA 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GG-GRSSAATAT---------DDDFMDYDRHAVVEYAAADTERSGG-GSKKRFRTKFTVD 129
           GG G +    A             +M               +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSA 171
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]

BLAST of PI0026206 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPAN--LLHCAACGCHRNFHRKVTYI 64
           N+   Y+ECL+NHAA++G +A DGCGEF    SS+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  AGGG-----RSSAATATDDDFMDYDRH--------------------------------- 124
           +          S+ T    ++  + RH                                 
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYAAADTERSG-GGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDE 162
                  + + +AAA    S   GS+KRFRTKF+ +QKEKM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

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BLAST of PI0026206 vs. ExPASy Swiss-Prot
Match: Q9FKP8 (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-31
Identity = 75/185 (40.54%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGGRSSAATATDDDFMDYDRHAVVEYAAADTE-------------------------R 122
                           F  Y   A V Y    ++                          
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 SGGGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMH 162
           +GGG +KR RTKFT +QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

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BLAST of PI0026206 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YIAGGGRSSAATATDDD MDYDRHAVVEYAAADTERSGGGSKKRFRTKFT DQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of PI0026206 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92
Identity = 175/179 (97.77%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDFMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTVDQKEKML 120
           YIA GGGRSSAATATDDD MDYDRHAVVEYAAADTERS GGGSKKRFRTKFTVDQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of PI0026206 vs. ExPASy TrEMBL
Match: A0A6J1KHP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495841 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.2e-82
Identity = 156/177 (88.14%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YIAGGGRSSAATA  DD MDYD+      AA DTERSGGG KKRFRTKFT DQ+EKMLAF
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of PI0026206 vs. ExPASy TrEMBL
Match: A0A6J1EDP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111431593 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.2e-82
Identity = 156/177 (88.14%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YIAGGGRSSAATA  DD MDYD+      AA DTERSGGG KKRFRTKFT DQ+EKMLAF
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of PI0026206 vs. ExPASy TrEMBL
Match: A0A5D3BLK8 (Zinc-finger homeodomain protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002620 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.8e-80
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDFMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTVDQKEKML 120
           YIA GGGRSSAATATDDD MDYDRHAVVEYAAADTERS GGGSKKRFRTKFTVDQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKV 154
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFK+
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKI 155

[Close]

BLAST of PI0026206 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 2.6e-94
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YIAGGGRSSAATATDDD MDYDRHAVVEYAAADTERSGGGSKKRFRTKFT DQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of PI0026206 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 5.4e-92
Identity = 175/179 (97.77%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDFMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTVDQKEKML 120
           YIA GGGRSSAATATDDD MDYDRHAVVEYAAADTERS GGGSKKRFRTKFTVDQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of PI0026206 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 347.8 bits (891), Expect = 5.4e-92
Identity = 172/179 (96.09%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERS--GGGSKKRFRTKFTVDQKEKML 120
           YIAGGGRSSAATATDDD MDYDRHAVVEYAAADTERS  GGGSKKRFRTKFT DQKEKML
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGGSKKRFRTKFTADQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of PI0026206 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo] >KAG6584298.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019891.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81
Identity = 156/177 (88.14%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YIAGGGRSSAATA  DD MDYD+      AA DTERSGGG KKRFRTKFT DQ+EKMLAF
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLTQ 178
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNS SSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of PI0026206 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80
Identity = 150/176 (85.23%), Postives = 161/176 (91.48%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDFMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTVDQKEKMLAF 120
           YI GGGR S+A  T D+ MDYDRHA+VEYAAADT    GGSKKRFRTKFT DQKEKMLAF
Sbjct: 61  YIGGGGRFSSAAPTADNLMDYDRHAIVEYAAADT----GGSKKRFRTKFTTDQKEKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSSSSNSASTGNASSLT 177
           AE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNS SSNSASTGN SS+T
Sbjct: 121 AERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]

BLAST of PI0026206 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 80/175 (45.71%), Postives = 100/175 (57.14%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDFMDYDRHAVVEY-----------AAADTE-----RSGGGSKKRFR 122
            GG      T  +     +     +             A+ D E      S GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 162
           TKFT +QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of PI0026206 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32
Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPAN--LLHCAACGCHRNFHRKVTYI 64
           N+   Y+ECL+NHAA++G +A DGCGEF    SS+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  AGGG-----RSSAATATDDDFMDYDRH--------------------------------- 124
           +          S+ T    ++  + RH                                 
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYAAADTERSG-GGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDE 162
                  + + +AAA    S   GS+KRFRTKF+ +QKEKM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of PI0026206 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-32
Identity = 75/185 (40.54%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGGRSSAATATDDDFMDYDRHAVVEYAAADTE-------------------------R 122
                           F  Y   A V Y    ++                          
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 SGGGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMH 162
           +GGG +KR RTKFT +QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

[Close]

BLAST of PI0026206 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-31
Identity = 75/187 (40.11%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF           L CAAC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  -----------------VTYIAGGGRSSAATATDD------DFMDYDRHAVVEYAAADTE 129
                            +    GGG  +A ++T+D       F  Y       Y      
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQ----- 201

Query: 130 RSGGGSKKRFRTKFTVDQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWM 163
                 KKRFRTKF  +QKEKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWM
Sbjct: 202 -----PKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWM 257

[Close]

BLAST of PI0026206 vs. TAIR 10
Match: AT1G75240.1 (homeobox protein 33 )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 83/232 (35.78%), Postives = 104/232 (44.83%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV---------- 69
           YRECL+NHAAS+G    DGCGEF           L CAAC CHRNFHRK           
Sbjct: 76  YRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLI 135

Query: 70  -----------TYIAGGGR----------------------------------------- 129
                       Y  GGGR                                         
Sbjct: 136 SHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGMSPPGGGGMVTP 195

Query: 130 --------SSAATATDDDFMDYDRHA--VVEYAAADTERSGGGSKKRFRTKFTVDQKEKM 170
                      A ++ +D   Y + +      AA     S   SKKRFRTKFT DQKE+M
Sbjct: 196 MSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTTDQKERM 255

The following BLAST results are available for this feature:

BLAST of PI0026206 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB61	3.7e-35	45.71	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
A2XLF4	3.1e-34	46.45	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD...	[more]
Q10DV5	3.1e-34	46.45	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Z...	[more]
Q9LHF0	1.5e-31	39.02	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]
Q9FKP8	4.3e-31	40.54	Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]

BLAST of PI0026206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQK4	1.3e-94	98.31	Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430...	[more]
A0A1S3CU70	2.6e-92	97.77	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P...	[more]
A0A6J1KHP1	7.2e-82	88.14	zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A6J1EDP1	7.2e-82	88.14	zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A5D3BLK8	8.8e-80	97.42	Zinc-finger homeodomain protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of PI0026206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137520.1	2.6e-94	98.31	zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro...	[more]
XP_008467173.1	5.4e-92	97.77	PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo]	[more]
XP_038895089.1	5.4e-92	96.09	zinc-finger homeodomain protein 9-like [Benincasa hispida]	[more]
XP_022924045.1	1.5e-81	88.14	zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc...	[more]
XP_023542338.1	1.6e-80	85.23	zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0026206 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	2.6e-36	45.71	homeobox protein 22	[more]
AT3G28920.1	1.0e-32	39.02	homeobox protein 34	[more]
AT5G65410.1	3.0e-32	40.54	homeobox protein 25	[more]
AT2G18350.1	2.6e-31	40.11	homeobox protein 24	[more]
AT1G75240.1	2.2e-30	35.78	homeobox protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 102..160 e-value: 5.0E-28 score: 94.8
None	No IPR available	GENE3D	1.10.10.60		coord: 88..166 e-value: 2.3E-34 score: 119.0
None	No IPR available	PANTHER	PTHR31948:SF16	ZINC-FINGER HOMEODOMAIN PROTEIN 11	coord: 5..168
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 5..168
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 8..60 e-value: 8.7E-25 score: 86.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 9..58 e-value: 1.4E-22 score: 77.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 10..59 score: 23.35898
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 95..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026206.1	PI0026206.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding