PI0026173 (gene) Melon (PI 482460) v1

Overview


Name	PI0026173
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc finger protein JAGGED
Location	chr09: 14868673 .. 14870365 (+)
RNA-Seq Expression	PI0026173
Synteny	PI0026173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTGTCTGTTTCATCATGTAACTAAAAAATAAGACGCCCCTCAACTCTTTTTTTTTTTTTTTTTTCTTTAATTAAATATTATATGTTTTGAAATAACTGATGTTGTGTTTAATTTGTTGGTTTGCAGGCGATCCGAGGGGAGTCCTTTAGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGAAAACAGATTATTGAAGATAACTCAAGTGGTAAACTAAATAAAAACTATTAAAGAAACATCAACTACTTTTTTTGCTCTGATTTTGGGAGTTAATAAAATGGTTGAGTACTGTATGTGTGTTATTTGCAGGTCATAGGAAAAAGAAAAGTGGGTTAAAGGAGGGAAAAGAGGAGTTGGGAAAGGTGTATGAATGCAGGTTTTGTTCACTCAAGTTCTGCAAATCACAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTACTGATTAATATTTTGATTTTTTGATTTTTTTGATTTTATGAATGATTAGTCATGTCATGAAAAGAGAGGGGAAAAAATAAAAGAAAAAAGGGAGATGGAGGAGGAGGGGGAGTTTGTTTTACTTTTATGGGTGAATTATTAGATGCAGCTGCTCGCAGGTTTGTTTGTGTATGATTTGATTTTGACTTCATTTGTGTTTGGTTTTTGGTCAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCTCCTCCTCCTCCTCATTTAGGGTATTTTTTCATCTCTCTCATCTTTAAATTCATTATTCAACCCTACTTACATTTCATTCAACTTTTTATTCTACCAAATTGGATCCAATATCCAAAAATTGAGAGATCGGCATATTTCACAATTTTTTTAAAAATTAAATTTCCGATAATTTTGAATTTTTTTTTTTTCTAATACTAACCATGTTCAAATCTAACAATACTATTTACCAATACTTTGGAAGTTGGAACAGTAAAAAAAAATTGCAATATGTTTTCTAATTTTTTCTTTGAATTTCTAGAACTGAAAAATTACTAACGTCCCCAATAAAATTTGTGTTTTTTTTGGGTGATTAGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTGCCGGCGGCAGTGGCGGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGGTCGTCTCCAAGCACGCTTCTGCCGCAGCCGCCACCACCACCGCTACCTTCTTCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCTTCTAGTTTCCCTTCCTACTATCCTCCTCCACAAGCCTCGATCAACGACTACTATGTGGGACATGTCTTGGGGAACCTTCACAATGCAGCCATCAGACAGTGAACTACGGTTCTAGCTCGGTGGATTCGAGTAGCTACACTTGCATCGGAGCTCCGGTAGGACATGCTGCAGCAGGATTCGGTGGACGAGATGGTGGTGGGAGTGGCGGTAGAGATGGATCACAGCAGCAGCAGCGCTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTTTGTTTTAAAATTTTTCTGAGTCATGTATTTGAAATTCTGCAATGACACGCCACCCAGAGAAAGAGAGAGAGACATAACAAACTGACAAATGGGG

mRNA sequence

CTTCTGTCTGTTTCATCATGCGATCCGAGGGGAGTCCTTTAGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGAAAACAGATTATTGAAGATAACTCAAGTGGTCATAGGAAAAAGAAAAGTGGGTTAAAGGAGGGAAAAGAGGAGTTGGGAAAGGTGTATGAATGCAGGTTTTGTTCACTCAAGTTCTGCAAATCACAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCTCCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTGCCGGCGGCAGTGGCGGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGGTCGTCTCCAAGCACGCTTCTGCCGCAGCCGCCACCACCACCGCTACCTTCTTCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCTTCTAGTTTCCCTTCCTACTATCCTCCTCCACAAGCCTCGATCAACGACTACTATGTGGGACATGTCTTGGGGAACCTTCACAATGCAGCCATCAGACAGTGAACTACGGTTCTAGCTCGGTGGATTCGAGTAGCTACACTTGCATCGGAGCTCCGGTAGGACATGCTGCAGCAGGATTCGGTGGACGAGATGGTGGTGGGAGTGGCGGTAGAGATGGATCACAGCAGCAGCAGCGCTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTTTGTTTTAAAATTTTTCTGAGTCATGTATTTGAAATTCTGCAATGACACGCCACCCAGAGAAAGAGAGAGAGACATAACAAACTGACAAATGGGG

Coding sequence (CDS)

ATGCGATCCGAGGGGAGTCCTTTAGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGAAAACAGATTATTGAAGATAACTCAAGTGGTCATAGGAAAAAGAAAAGTGGGTTAAAGGAGGGAAAAGAGGAGTTGGGAAAGGTGTATGAATGCAGGTTTTGTTCACTCAAGTTCTGCAAATCACAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCTCCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTGCCGGCGGCAGTGGCGGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGGTCGTCTCCAAGCACGCTTCTGCCGCAGCCGCCACCACCACCGCTACCTTCTTCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCTTCTAGTTTCCCTTCCTACTATCCTCCTCCACAAGCCTCGATCAACGACTACTATGTGGGACATGTCTTGGGGAACCTTCACAATGCAGCCATCAGACAGTGA

Protein sequence

MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNLHNAAIRQ

Homology

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BLAST of PI0026173 vs. ExPASy Swiss-Prot
Match: Q6S591 (Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37
Identity = 96/182 (52.75%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKF 60
           MR E + LDLNNLP+D+ +DG KQ +E+ SS  ++KK G KEGK+E GKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 61  CKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAG 120
           CKSQALGGHMNRHRQERETETLN+ARQLV+ ND +   PP     G  H+  P  Y +  
Sbjct: 61  CKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT--PPGISPFGYHHTTDPTIYRSVY 120

Query: 121 GSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 180
            S         P+ +P     GSS + L+PQPP PP P  + PY  N  +  + F  YY 
Sbjct: 121 SS---------PMIYP-----GSSSTNLVPQPPMPPPPPPY-PYSSNQYSPHNHFNDYYL 165

Query: 181 PP 182
            P
Sbjct: 181 NP 165

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BLAST of PI0026173 vs. ExPASy Swiss-Prot
Match: Q9LG97 (Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36
Identity = 104/218 (47.71%), Postives = 126/218 (57.80%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSS-------GHRKKKSGLKEGKEELGKVYECRF 61
           R EGSPLDLNNLP+++   GKQ +E +++         R  K     GK+E GKVYECRF
Sbjct: 6   RQEGSPLDLNNLPDEF---GKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRF 65

Query: 62  CSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP----PPHLGCCHSM 121
           CSLKFCKSQALGGHMNRHRQERETETLNRARQLVF ND+LAA          ++G   + 
Sbjct: 66  CSLKFCKSQALGGHMNRHRQERETETLNRARQLVFGNDSLAAVGAQLNFRDVNMGGGGAA 125

Query: 122 APANYHTAGG----SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYN 181
           AP      GG     GGVG D  +PLR P +      P    PQPPP      +  YLY 
Sbjct: 126 APPPTMQMGGGGFRGGGVGGDPCIPLR-PVQ------PRLSPPQPPP------YHHYLYT 185

Query: 182 SPTRPS-----SFPSYYPPP-----QASINDYYVGHVL 195
           +   PS     S+P+ YP P      A++ DY +GH +
Sbjct: 186 TTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIGHAV 207

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BLAST of PI0026173 vs. ExPASy Swiss-Prot
Match: Q6S592 (Zinc finger protein JAGGED-like OS=Arabidopsis thaliana OX=3702 GN=JGL PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.6e-24
Identity = 78/174 (44.83%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 4   EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQ 63
           E + LDLNNLP+D  RD     E+  S       G +E + + GK YECRFCSLKF KSQ
Sbjct: 5   ENNTLDLNNLPDDPSRDIFPFFEEGFSS-SSSSGGFREKQTKDGKEYECRFCSLKFFKSQ 64

Query: 64  ALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGSGG 123
           ALGGHMNRHRQERETE+LN+AR+LV  ND+       PPH G      P ++    G   
Sbjct: 65  ALGGHMNRHRQERETESLNKARELVLRNDSF------PPHQG------PPSFSYHQGDVH 124

Query: 124 VGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR 171
           +G  +   P+ +P R FS    S++L   PP   PPL S    H   + N+ TR
Sbjct: 125 IGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLYPPLSSPFPQHNTNIGNNGTR 165

[Close]

BLAST of PI0026173 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-05
Identity = 31/105 (29.52%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 21  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETET 80
           G  ++E  S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + 
Sbjct: 12  GINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER--QL 71

Query: 81  LNRARQLVFSN---------------------DNLAAQPPPPPHL 105
           L RA+ L                          +L +QP PPPH+
Sbjct: 72  LKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPHM 114

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BLAST of PI0026173 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-04
Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 48 KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNLAAQP 99
          +++ C FCS KF  SQALGGH N H++ER       RA   V +ND L   P
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLP 84

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BLAST of PI0026173 vs. ExPASy TrEMBL
Match: A0A1S3CQ11 (zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.7e-107
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFC 60
           MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120
           KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120

Query: 121 SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180
           SG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP
Sbjct: 121 SGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180

Query: 181 PQASINDYYVGHVLGN 197
           PQASINDYYVGHVLGN
Sbjct: 181 PQASINDYYVGHVLGN 196

[Close]

BLAST of PI0026173 vs. ExPASy TrEMBL
Match: A0A5A7U1F5 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00090 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 190/195 (97.44%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCK 61
           RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCK
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGS 121
           SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHTAGGS
Sbjct: 109 SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHTAGGS 168

Query: 122 GGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 181
           G VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
Sbjct: 169 GSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 228

Query: 182 QASINDYYVGHVLGN 197
           QASINDYYVGHVLGN
Sbjct: 229 QASINDYYVGHVLGN 242

[Close]

BLAST of PI0026173 vs. ExPASy TrEMBL
Match: A0A0A0KTC2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 189/195 (96.92%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCK 61
           RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCK
Sbjct: 5   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 64

Query: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGS 121
           SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+AGGS
Sbjct: 65  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHSAGGS 124

Query: 122 GGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 181
           G VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
Sbjct: 125 GNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 184

Query: 182 QASINDYYVGHVLGN 197
           QASINDYYVGHVLGN
Sbjct: 185 QASINDYYVGHVLGN 198

[Close]

BLAST of PI0026173 vs. ExPASy TrEMBL
Match: A0A5D3BYD4 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00720 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 181/195 (92.82%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCK 61
           RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCK
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGS 121
           SQAL         ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHTAGGS
Sbjct: 109 SQAL---------ERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHTAGGS 168

Query: 122 GGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 181
           G VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
Sbjct: 169 GSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 228

Query: 182 QASINDYYVGHVLGN 197
           QASINDYYVGHVLGN
Sbjct: 229 QASINDYYVGHVLGN 233

[Close]

BLAST of PI0026173 vs. ExPASy TrEMBL
Match: A0A6J1I6U1 (zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 172/197 (87.31%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFC 60
           MRS+GSPLDLNNLPEDYIRD KQIIED S+GHRKKKSG KEG EE GKVYECRFCSLKFC
Sbjct: 2   MRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFC 61

Query: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120
           KSQALGGHMNRHRQERETETLNRARQLVFSNDNLA Q  PPPHLGCCHSMAP +YHTA G
Sbjct: 62  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAVQ-SPPPHLGCCHSMAPGSYHTA-G 121

Query: 121 SGGVGSDSTLPLRFPTRMFSGSSPSTLL-PQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 180
           SGGVGSD TL LRFPTRMF GSSP+TLL P P PPP P  HQPYLY+SP+RPSSFPSYYP
Sbjct: 122 SGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYP 181

Query: 181 PPQASINDYYVGHVLGN 197
           PPQASINDYYVGHVLGN
Sbjct: 182 PPQASINDYYVGHVLGN 196

[Close]

BLAST of PI0026173 vs. NCBI nr
Match: XP_008465782.1 (PREDICTED: zinc finger protein JAGGED [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 2.0e-106
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFC 60
           MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120
           KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120

Query: 121 SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180
           SG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP
Sbjct: 121 SGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180

Query: 181 PQASINDYYVGHVLGN 197
           PQASINDYYVGHVLGN
Sbjct: 181 PQASINDYYVGHVLGN 196

[Close]

BLAST of PI0026173 vs. NCBI nr
Match: XP_011655169.1 (zinc finger protein JAGGED [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 7.1e-104
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFC 60
           MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120
           KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+AGG
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHSAGG 120

Query: 121 SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180
           SG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP
Sbjct: 121 SGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPP 180

Query: 181 PQASINDYYVGHVLGN 197
           PQASINDYYVGHVLGN
Sbjct: 181 PQASINDYYVGHVLGN 195

[Close]

BLAST of PI0026173 vs. NCBI nr
Match: KAA0047421.1 (zinc finger protein JAGGED [Cucumis melo var. makuwa])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 190/195 (97.44%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCK 61
           RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCK
Sbjct: 49  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 108

Query: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGS 121
           SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYHTAGGS
Sbjct: 109 SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHTAGGS 168

Query: 122 GGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 181
           G VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
Sbjct: 169 GSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 228

Query: 182 QASINDYYVGHVLGN 197
           QASINDYYVGHVLGN
Sbjct: 229 QASINDYYVGHVLGN 242

[Close]

BLAST of PI0026173 vs. NCBI nr
Match: XP_038876123.1 (zinc finger protein JAGGED-like [Benincasa hispida])

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-103
Identity = 188/197 (95.43%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFC 60
           MRSEGSPLDLNNLPEDYIRDGKQIIED+S+GHRKKKSGLKEGKEE GKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGLKEGKEEAGKVYECRFCSLKFC 60

Query: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120
           KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGG 120

Query: 121 SG-GVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 180
            G GVGSDSTLPLRFPTRMFSGSSPS+LLPQPPPPPLP SHQPYLY+SP+RPSSFPSYYP
Sbjct: 121 GGSGVGSDSTLPLRFPTRMFSGSSPSSLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYYP 180

Query: 181 PPQASINDYYVGHVLGN 197
           PPQASINDYYVGHVLGN
Sbjct: 181 PPQASINDYYVGHVLGN 197

[Close]

BLAST of PI0026173 vs. NCBI nr
Match: KGN51212.2 (hypothetical protein Csa_008797 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103
Identity = 189/195 (96.92%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 2   RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCK 61
           RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCK
Sbjct: 9   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 68

Query: 62  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGS 121
           SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSMAPANYH+AGGS
Sbjct: 69  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ-PPPPHLGCCHSMAPANYHSAGGS 128

Query: 122 GGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 181
           G VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
Sbjct: 129 GNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP 188

Query: 182 QASINDYYVGHVLGN 197
           QASINDYYVGHVLGN
Sbjct: 189 QASINDYYVGHVLGN 202

[Close]

BLAST of PI0026173 vs. TAIR 10
Match: AT1G68480.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 8.6e-39
Identity = 96/182 (52.75%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 1   MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKF 60
           MR E + LDLNNLP+D+ +DG KQ +E+ SS  ++KK G KEGK+E GKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 61  CKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAG 120
           CKSQALGGHMNRHRQERETETLN+ARQLV+ ND +   PP     G  H+  P  Y +  
Sbjct: 61  CKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT--PPGISPFGYHHTTDPTIYRSVY 120

Query: 121 GSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 180
            S         P+ +P     GSS + L+PQPP PP P  + PY  N  +  + F  YY 
Sbjct: 121 SS---------PMIYP-----GSSSTNLVPQPPMPPPPPPY-PYSSNQYSPHNHFNDYYL 165

Query: 181 PP 182
            P
Sbjct: 181 NP 165

[Close]

BLAST of PI0026173 vs. TAIR 10
Match: AT1G13400.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-25
Identity = 78/174 (44.83%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 4   EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQ 63
           E + LDLNNLP+D  RD     E+  S       G +E + + GK YECRFCSLKF KSQ
Sbjct: 5   ENNTLDLNNLPDDPSRDIFPFFEEGFSS-SSSSGGFREKQTKDGKEYECRFCSLKFFKSQ 64

Query: 64  ALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTAGGSGG 123
           ALGGHMNRHRQERETE+LN+AR+LV  ND+       PPH G      P ++    G   
Sbjct: 65  ALGGHMNRHRQERETESLNKARELVLRNDSF------PPHQG------PPSFSYHQGDVH 124

Query: 124 VGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR 171
           +G  +   P+ +P R FS    S++L   PP   PPL S    H   + N+ TR
Sbjct: 125 IGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLYPPLSSPFPQHNTNIGNNGTR 165

[Close]

BLAST of PI0026173 vs. TAIR 10
Match: AT5G05120.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-06
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 49 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNRA 85
          +Y+C++C  KF K+QALGGH N HR+ERE E   +A
Sbjct: 26 IYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQQKA 61

[Close]

BLAST of PI0026173 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06
Identity = 31/105 (29.52%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 21  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETET 80
           G  ++E  S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + 
Sbjct: 12  GINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER--QL 71

Query: 81  LNRARQLVFSN---------------------DNLAAQPPPPPHL 105
           L RA+ L                          +L +QP PPPH+
Sbjct: 72  LKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPHM 114

[Close]

BLAST of PI0026173 vs. TAIR 10
Match: AT5G27880.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06
Identity = 51/170 (30.00%), Postives = 75/170 (44.12%), Query Frame = 0


Query: 29  SSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLV 88
           SS  R+ +  +K    +  K+Y C FC   F  SQALGGH N H+QERE +   +  +  
Sbjct: 59  SSAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEMEAE 118

Query: 89  FSNDNLAAQPPPPPH--LGCCHSMAPANYHTAG-----------GSGGVGSD-STLPLRF 148
           +   +        PH  LG     A +N +  G            S   G + + +P   
Sbjct: 119 YPGLSFLNPFLDKPHILLGGYSQDALSNENHLGITLDPFKRLIYPSFNAGMNMAVVPRVT 178

Query: 149 PTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQAS 185
           PTR F+G++ +       P PLPS +  Y  NS    +  P  +PPPQ +
Sbjct: 179 PTRFFTGNTSTNGSTSRVPDPLPSYNNLYPSNS---RNVLP--FPPPQTT 223

The following BLAST results are available for this feature:

BLAST of PI0026173 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6S591	1.2e-37	52.75	Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1	[more]
Q9LG97	2.3e-36	47.71	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1...	[more]
Q6S592	7.6e-24	44.83	Zinc finger protein JAGGED-like OS=Arabidopsis thaliana OX=3702 GN=JGL PE=2 SV=1	[more]
Q39265	6.0e-05	29.52	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9FKA9	2.3e-04	46.15	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]

BLAST of PI0026173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQ11	9.7e-107	97.96	zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1	[more]
A0A5A7U1F5	5.9e-104	97.44	Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KTC2	1.7e-103	96.92	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 P...	[more]
A0A5D3BYD4	1.3e-95	92.82	Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1I6U1	1.4e-89	87.31	zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4...	[more]

BLAST of PI0026173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465782.1	2.0e-106	97.96	PREDICTED: zinc finger protein JAGGED [Cucumis melo]	[more]
XP_011655169.1	7.1e-104	96.94	zinc finger protein JAGGED [Cucumis sativus]	[more]
KAA0047421.1	1.2e-103	97.44	zinc finger protein JAGGED [Cucumis melo var. makuwa]	[more]
XP_038876123.1	2.1e-103	95.43	zinc finger protein JAGGED-like [Benincasa hispida]	[more]
KGN51212.2	3.5e-103	96.92	hypothetical protein Csa_008797 [Cucumis sativus]	[more]

BLAST of PI0026173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68480.1	8.6e-39	52.75	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G13400.1	5.4e-25	44.83	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G05120.1	1.9e-06	55.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	4.3e-06	29.52	zinc finger protein 6	[more]
AT5G27880.1	9.6e-06	30.00	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 26..97 e-value: 3.4E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..174
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 1..198
IPR031113	Zinc finger protein JAGGED-like	PANTHER	PTHR45730:SF32	ZINC FINGER PROTEIN JAGGED	coord: 1..198
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 52..72
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 50..77 score: 10.283794
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 48..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026173.1	PI0026173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0001522	pseudouridine synthesis
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding