PI0025968 (gene) Melon (PI 482460) v1

Overview
NamePI0025968
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 18395538 .. 18395745 (-)
RNA-Seq ExpressionPI0025968
SyntenyPI0025968
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTTTACAAGTTATTCAGGTACTCCTACTTAGACAGAGTAGCTATCTTGATTTGACTGTTTCAGCGCTTCAATTCCTCCTTGAATATACCAAAAATGCTGTGGGCCTTCATACTTGATTATATCAAAGTGCAAGATTTCATCCTTACTTTATTGCTGTTTGAAAAATATGCTTTCTGTGGGGATATCATTGCTTTATTTTGA

mRNA sequence

ATGAACCTTTTACAAGTTATTCAGCGCTTCAATTCCTCCTTGAATATACCAAAAATGCTGTGGGCCTTCATACTTGATTATATCAAAGTGCAAGATTTCATCCTTACTTTATTGCTGTTTGAAAAATATGCTTTCTGTGGGGATATCATTGCTTTATTTTGA

Coding sequence (CDS)

ATGAACCTTTTACAAGTTATTCAGCGCTTCAATTCCTCCTTGAATATACCAAAAATGCTGTGGGCCTTCATACTTGATTATATCAAAGTGCAAGATTTCATCCTTACTTTATTGCTGTTTGAAAAATATGCTTTCTGTGGGGATATCATTGCTTTATTTTGA

Protein sequence

MNLLQVIQRFNSSLNIPKMLWAFILDYIKVQDFILTLLLFEKYAFCGDIIALF
Homology
[Close]
BLAST of PI0025968 vs. ExPASy TrEMBL
Match: A0A0A0LAJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251920 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1  MNLLQVIQRFNSSLNIPKMLWAFILDYIKVQDFILTLLLFEKYAFCGDIIALF 54
          MNLLQ IQRFNSSLNIP +LWAFILDYI+VQDF+LTLLLFE YAFCGDIIALF
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALF 53

[Close]
BLAST of PI0025968 vs. NCBI nr
Match: KGN57682.1 (hypothetical protein Csa_010521 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1  MNLLQVIQRFNSSLNIPKMLWAFILDYIKVQDFILTLLLFEKYAFCGDIIALF 54
          MNLLQ IQRFNSSLNIP +LWAFILDYI+VQDF+LTLLLFE YAFCGDIIALF
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALF 53

The following BLAST results are available for this feature:
BLAST of PI0025968 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025968 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAJ71.6e-1688.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251920 PE=4 SV=1[more]
BLAST of PI0025968 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57682.13.2e-1688.68hypothetical protein Csa_010521 [Cucumis sativus][more]
BLAST of PI0025968 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025968.1PI0025968.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane