Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACATTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGAAGTATGAAAAAAATGGTGATGCTCTTCAAGTAAAAGCTTTTGATGATGTTCCAAGCTCAACTCAAATTGGCAGTCAAGGATTTGTACCCAAAATCCTAAAACCTAGTGACGATGTTGCACACAAGCTTAGTTCAAAAGCTTATATACAACCAACTAAGCAAACAGGAGGAAAGGGTAAAAAATCCATCACAAGGGCTCTCAACATAAAGTCATCTAATAAGTCATTTAGTCGAGAACGAATAAAGGAAATTTTCCTATATCATGATAGCAACAATGATGGTTTTCTTAACAGAATGGAACTTACTAAAGCTTTTGCCTTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGTTACGGAATGGTGTATGCCGATGAAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGCAAAATTATCAAGAAGAAATAAATTCTTAAGCTATTTTCACATGTGTTTTAGATATGATGGTGAACTTCAAACAAGCG
mRNA sequence
CAACATTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGAAGTATGAAAAAAATGGTGATGCTCTTCAAGTAAAAGCTTTTGATGATGTTCCAAGCTCAACTCAAATTGGCAGTCAAGGATTTGTACCCAAAATCCTAAAACCTAGTGACGATGTTGCACACAAGCTTAGTTCAAAAGCTTATATACAACCAACTAAGCAAACAGGAGGAAAGGGTAAAAAATCCATCACAAGGGCTCTCAACATAAAGTCATCTAATAAGTCATTTAGTCGAGAACGAATAAAGGAAATTTTCCTATATCATGATAGCAACAATGATGGTTTTCTTAACAGAATGGAACTTACTAAAGCTTTTGCCTTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGTTACGGAATGGTGTATGCCGATGAAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGCAAAATTATCAAGAAGAAATAAATTCTTAAGCTATTTTCACATGTGTTTTAGATATGATGGTGAACTTCAAACAAGCG
Coding sequence (CDS)
ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTATGTTGATCAAGAAGTATGAAAAAAATGGTGATGCTCTTCAAGTAAAAGCTTTTGATGATGTTCCAAGCTCAACTCAAATTGGCAGTCAAGGATTTGTACCCAAAATCCTAAAACCTAGTGACGATGTTGCACACAAGCTTAGTTCAAAAGCTTATATACAACCAACTAAGCAAACAGGAGGAAAGGGTAAAAAATCCATCACAAGGGCTCTCAACATAAAGTCATCTAATAAGTCATTTAGTCGAGAACGAATAAAGGAAATTTTCCTATATCATGATAGCAACAATGATGGTTTTCTTAACAGAATGGAACTTACTAAAGCTTTTGCCTTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGTTACGGAATGGTGTATGCCGATGAAAATGAAGATGGTCTTATCAGTGAAGCTGAGCTTGACAAACTCATTGATTATGCGAGCAAAATTATCAAGAAGAAATAA
Protein sequence
MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVPSSTQIGSQGFVPKILKPSDDVAHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRMELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK
Homology
BLAST of PI0025785 vs. ExPASy TrEMBL
Match:
A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 4.5e-73
Identity = 148/171 (86.55%), Postives = 159/171 (92.98%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVPSSTQIGSQGFVPKILKPSDDVA 60
MYISKLQASMAMYEASMLIK+YEKNGDA++VKAFDDV SSTQIG++ V KILKPSD VA
Sbjct: 1 MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60
Query: 61 HKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRME 120
HKL S+A+IQPT++TGGKGKKSITR L+ KSSN S SRERIKEIF YHD+NNDGFLNRME
Sbjct: 61 HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
LTKAFAFLGSMFPFYKACYGMVYAD NEDGLISEAELDKLIDYASKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171
BLAST of PI0025785 vs. ExPASy TrEMBL
Match:
A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVPSSTQIGSQGFVPKILKPSDDVA 60
MYISKLQASMAMYEA M IK YEK+GDA+QVK F+DV SSTQIG QG VPKILK SDDVA
Sbjct: 1 MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
Query: 61 HKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRME 120
HKLS +A+IQPT+QTGGKGKKSI RAL+IKSSN SFSR++IKEIF YHD+NNDGFLN +E
Sbjct: 61 HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
LTKAFAFLGSMFPFYKACYGMVYAD N DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
BLAST of PI0025785 vs. ExPASy TrEMBL
Match:
A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.4e-42
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVP-SSTQIGSQGFVPKILKPSDDV 60
M+ISKLQASMA YEAS LIKKY +NGD +Q+K+F D+ STQ+ +QG +P+ILK + +V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRM 120
KLSS A+ K+S FSRE++KEIF YHDS+ DGFLN
Sbjct: 61 GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
ELTKAFAFLGS+ PF KA YGM YAD N+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of PI0025785 vs. ExPASy TrEMBL
Match:
A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42
Identity = 101/173 (58.38%), Postives = 127/173 (73.41%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAF-DDVPSSTQIG-SQGFVPKILKPSDD 60
M+I +LQ S A YEAS L+KKYE+NG+ + + AF D+ STQI ++ K LKP+DD
Sbjct: 28 MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
Query: 61 VAHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNR 120
VAHKLSS A ++ Q GK + I R + K+SN FSRE+IKEIF Y+DS+ DGFLN
Sbjct: 88 VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147
Query: 121 MELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200
BLAST of PI0025785 vs. ExPASy TrEMBL
Match:
A0A0A0KIY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 101/176 (57.39%), Postives = 132/176 (75.00%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDV-PSSTQIGSQGFVPK--ILKPSD 60
MYIS LQ S A YEAS L+KK+E N + + +KAF+ + P+ST+I ++ + ILKPS+
Sbjct: 1 MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60
Query: 61 -DVAHKLSSKAYIQPTKQTG-GKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGF 120
VAH L+S AY+ P+KQ G GK + + T L+IK+SN FSRE+IKEIF YHDS+NDGF
Sbjct: 61 HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120
Query: 121 LNRMELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
LN E+TKAFAFLG++ P YKA +GMVYAD N+DGLIS+ EL+KL+DYA K K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176
BLAST of PI0025785 vs. NCBI nr
Match:
KAA0065465.1 (putative calcium-binding protein CML11 [Cucumis melo var. makuwa])
HSP 1 Score: 278.5 bits (711), Expect = 3.9e-71
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVPSSTQIGSQGFVPKILKPSDDVA 60
MYISKLQASMAMYEA M IK YEK+GDA+QVK F+DV SSTQIG QG VPKILK SDDVA
Sbjct: 1 MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
Query: 61 HKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRME 120
HKLS +A+IQPT+QTGGKGKKSI RAL+IKSSN SFSR++IKEIF YHD+NNDGFLN +E
Sbjct: 61 HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
Query: 121 LTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
LTKAFAFLGSMFPFYKACYGMVYAD N DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171
BLAST of PI0025785 vs. NCBI nr
Match:
KAE8648233.1 (hypothetical protein Csa_018371 [Cucumis sativus])
HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
Query: 10 MAMYEASMLIKKYEKNGDALQVKAFDDVPSSTQIGSQGFVPKILKPSDDVAHKLSSKAYI 69
MAMYEASMLIK+YEKNGDA++VKAFDDV SSTQIG++ V KILKPSD VAHKL S+A+I
Sbjct: 1 MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI 60
Query: 70 QPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRMELTKAFAFLG 129
QPT++TGGKGKKSITR L+ KSSN S SRERIKEIF YHD+NNDGFLNRMELTKAFAFLG
Sbjct: 61 QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG 120
Query: 130 SMFPFYKACYGMVYADENEDGLISEAELDKLIDYA 165
SMFPFYKACYGMVYAD NEDGLISEAELDKLIDYA
Sbjct: 121 SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 155
BLAST of PI0025785 vs. NCBI nr
Match:
XP_022930007.1 (uncharacterized protein LOC111436449 [Cucurbita moschata])
HSP 1 Score: 181.8 bits (460), Expect = 5.0e-42
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVP-SSTQIGSQGFVPKILKPSDDV 60
M+ISKLQASMA YEAS LIKKY +NGD +Q+K+F D+ STQ+ +QG +P+ILK + +V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRM 120
KLSS A+ K+S FSRE++KEIF YHDS+ DGFLN
Sbjct: 61 GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
ELTKAFAFLGS+ PF KA YGM YAD N+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of PI0025785 vs. NCBI nr
Match:
XP_023530717.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 179.9 bits (455), Expect = 1.9e-41
Identity = 101/172 (58.72%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVP-SSTQIGSQGFVPKILKPSDDV 60
M+ISKLQASMA YEAS LIKKY +NGD +Q+K+F + STQ+ +QG +P+ILK + +V
Sbjct: 1 MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSGIARDSTQLNNQGKIPEILKDNKNV 60
Query: 61 AHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRM 120
KLSS A+ K+S FSRE++KEIF YHDS+ DGFLN
Sbjct: 61 GLKLSSNAH--------------------PKTSKLQFSREQMKEIFRYHDSDKDGFLNLR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
ELTKAFAFLGS+ PF KA YGM YAD N+DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLIDYAQKFVKKK 152
BLAST of PI0025785 vs. NCBI nr
Match:
XP_023530739.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 177.2 bits (448), Expect = 1.2e-40
Identity = 97/172 (56.40%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 1 MYISKLQASMAMYEASMLIKKYEKNGDALQVKAFDDVP-SSTQIGSQGFVPKILKPSDDV 60
M+I KLQASMA YEAS +IKK +NGD +Q+KAF+ + +STQ+ +QG VP+IL+ + +V
Sbjct: 1 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 60
Query: 61 AHKLSSKAYIQPTKQTGGKGKKSITRALNIKSSNKSFSRERIKEIFLYHDSNNDGFLNRM 120
K SS + +K+SN FSRE++KEIF YHDS+ DGFLN
Sbjct: 61 GPKFSSNTH--------------------LKASNMQFSREKMKEIFRYHDSDKDGFLNIR 120
Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADENEDGLISEAELDKLIDYASKIIKKK 172
ELTKAFAFLGS+ PF KA YGM YAD N+DGLISEAELDKL+DYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFMKKK 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KMQ1 | 4.5e-73 | 86.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1 | [more] |
A0A5A7VI66 | 1.9e-71 | 84.21 | Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A6J1EP67 | 2.4e-42 | 59.30 | uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
A0A0A0KLF3 | 3.2e-42 | 58.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1 | [more] |
A0A0A0KIY4 | 1.2e-41 | 57.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |