PI0025704 (gene) Melon (PI 482460) v1

Overview


Name	PI0025704
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NBS-LRR type resistance protein
Location	chr01: 14307137 .. 14308578 (+)
RNA-Seq Expression	PI0025704
Synteny	PI0025704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAAAGCGGAAGCAAACGACTACACTATGACCATCACGTGTCTCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTACCTTTGACTGTAAAAGTTAAACATGGAAAGGGTGAGTATACACATATACTCAGTAAGGGGGAAACTACAATCAAGCTAGGGTTGAACAGTTATCTTCCTATGGGTATCCTGCAGCAATATCAGTCTAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGGAGGCTCACCTAATCAGTCTGGTGATCCCGAAGGAAGCACCTATCAGTCTGGTGGCCCGAGAGTCGTACCTAAGCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGTACACTATCATAGATAAAGATAACCGTTCACCCATTCATACAAATCACACATCATTCATGCTATCCAGAATATTCATCAAAAGGCAGAGCCTCAATCAGTCATGCTTGGTAATATTCAGTCCATAATCAAGGATAAGCACATAACGTAGTTTCATGGAAGTATCTCATTCCTAGCAATCGGCCCAACATCCCAAAATTTCAATTCCAATCACGGTCTCTTACAAACATTTCATATTCCAATGCATTTCTCATTTGCTAAAATGATAGAGAAACCCTTACCTCGGATGTGCTAAGTCCAAGATGTACTACGTGGCAAGGAACGTCCAAAACGCGAGATAGGCAGGCTCCAAACGCCTGCTTCCTCGGTGAAACCACAATGCTACGCGGCAAGAAGAGCTACAACGCGAGACAACCGAAATCCTAAGATTCGAAATAGAGCCAAAACAAGTCAAAACGGACGAAGACTAACCTTAAACAATCCAAGGGAGCTTGCGTAAGGAGAGGCGAGTAGAGGGCCTCAAAACGCGACACGGCTCCTCAGCTCGCGGGCAAGGGAGGGGAATTCAGCTGAACGCGAGGCTGCTCGCGGACAAAGCTGGCGACAAAGGTACTCGCGAACCACACTTCAGGTCGCAAACTAACACCTCCTCTCGCGTGCCGAGAGACTTACAAAACGCTAAGGCAGAATGCGGACTAAAGGATCTGTTAAGAGAAAAGAGTTTTACTTCGCGGGAGCAAGGATTTAAAAGTAGAACGCGAAGAAGAAATGGAGAACAAGCTTTCGGTGAACTTACCCACCAAGGGTACTCCACAGGCAAGGCTTGGCTTAAGGAATGGTCTTATGCCGCACGACAAGGCTTTGCGAACACAACCCAGGCAACACAGCAGGCGGCACGCGCTTCCGGCGGTACGGGCAGACGGAGATGGAGTTCCGAACGGCGAGGCAACACGGCGCTGGGTTATCTGGAGAGAAAAATGGGCTGCTCGGGAAGGAAACAGGAAAAAGTGAGAGGGTTTAGGGCTGGAGCAAGGCCAATACACGGCTGA

mRNA sequence

ATGACTGAAAGCGGAAGCAAACGACTACACTATGACCATCACGTGTCTCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTACCTTTGACTGTAAAAGTTAAACATGGAAAGGGTGAGTATACACATATACTCAGTAAGGGGGAAACTACAATCAAGCTAGGCAATATCAGTCTAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGGAGGCTCACCTAATCAGTCTGGTGATCCCGAAGGAAGCACCTATCAGTCTGGTGGCCCGAGAGTCGTACCTAAGCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGAACGTCCAAAACGCGAGATAGGCAGGCTCCAAACGCCTGCTTCCTCGGTGAAACCACAATGCTACGCGGCAAGAAGAGCTACAACGCGAGACAACCGAAATCCTAAGATTCGAAATAGAGCCAAAACAAGGAGCTTGCGTAAGGAGAGGCGAGTAGAGGGCCTCAAAACGCGACACGGCTCCTCAGCTCGCGGGCAAGGGAGGGGAATTCAGCTGAACGCGAGGCTGCTCGCGGACAAAGCTGGCGACAAAGGTACTCGCGAACCACACTTCAGGTCGCAAACTAACACCTCCTCTCGCGTGCCGAGAGACTTACAAAACGCTAAGGCAGAATGCGGACTAAAGGATCTGTTAAGAGAAAAGAGTTTTACTTCGCGGGAGCAAGGATTTAAAAGTAGAACGCGAAGAAGAAATGGAGAACAAGCTTTCGGTGAACTTACCCACCAAGGGTACTCCACAGGCAAGGCTTGGCTTAAGGAATGGTCTTATGCCGCACGACAAGGCTTTGCGAACACAACCCAGGCAACACAGCAGGCGGCACGCGCTTCCGGCGGTACGGGCAGACGGAGATGGAGTTCCGAACGGCGAGGCAACACGGCGCTGGGTTATCTGGAGAGAAAAATGGGCTGCTCGGGAAGGAAACAGGAAAAAGTGAGAGGGTTTAGGGCTGGAGCAAGGCCAATACACGGCTGA

Coding sequence (CDS)

ATGACTGAAAGCGGAAGCAAACGACTACACTATGACCATCACGTGTCTCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTACCTTTGACTGTAAAAGTTAAACATGGAAAGGGTGAGTATACACATATACTCAGTAAGGGGGAAACTACAATCAAGCTAGGCAATATCAGTCTAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGGAGGCTCACCTAATCAGTCTGGTGATCCCGAAGGAAGCACCTATCAGTCTGGTGGCCCGAGAGTCGTACCTAAGCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGAACGTCCAAAACGCGAGATAGGCAGGCTCCAAACGCCTGCTTCCTCGGTGAAACCACAATGCTACGCGGCAAGAAGAGCTACAACGCGAGACAACCGAAATCCTAAGATTCGAAATAGAGCCAAAACAAGGAGCTTGCGTAAGGAGAGGCGAGTAGAGGGCCTCAAAACGCGACACGGCTCCTCAGCTCGCGGGCAAGGGAGGGGAATTCAGCTGAACGCGAGGCTGCTCGCGGACAAAGCTGGCGACAAAGGTACTCGCGAACCACACTTCAGGTCGCAAACTAACACCTCCTCTCGCGTGCCGAGAGACTTACAAAACGCTAAGGCAGAATGCGGACTAAAGGATCTGTTAAGAGAAAAGAGTTTTACTTCGCGGGAGCAAGGATTTAAAAGTAGAACGCGAAGAAGAAATGGAGAACAAGCTTTCGGTGAACTTACCCACCAAGGGTACTCCACAGGCAAGGCTTGGCTTAAGGAATGGTCTTATGCCGCACGACAAGGCTTTGCGAACACAACCCAGGCAACACAGCAGGCGGCACGCGCTTCCGGCGGTACGGGCAGACGGAGATGGAGTTCCGAACGGCGAGGCAACACGGCGCTGGGTTATCTGGAGAGAAAAATGGGCTGCTCGGGAAGGAAACAGGAAAAAGTGAGAGGGTTTAGGGCTGGAGCAAGGCCAATACACGGCTGA

Protein sequence

MTESGSKRLHYDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFHNTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHKCLQERPKREIGRLQTPASSVKPQCYAARRATTRDNRNPKIRNRAKTRSLRKERRVEGLKTRHGSSARGQGRGIQLNARLLADKAGDKGTREPHFRSQTNTSSRVPRDLQNAKAECGLKDLLREKSFTSREQGFKSRTRRRNGEQAFGELTHQGYSTGKAWLKEWSYAARQGFANTTQATQQAARASGGTGRRRWSSERRGNTALGYLERKMGCSGRKQEKVRGFRAGARPIHG

Homology

[Close]

BLAST of PI0025704 vs. ExPASy TrEMBL
Match: A0A5A7UDY6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001660 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-11
Identity = 50/112 (44.64%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 6   SKRLHYDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFH 65
           ++R  Y  H S LPL GLPL +PL  K+K  KGEY    S G       +  L       
Sbjct: 16  NQRRPYGLHASFLPLVGLPLAVPLPEKLKRRKGEYKIYRSSGSVECTHQSRDL------- 75

Query: 66  NTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
                 GG   QS DPEG TYQSG P     QS DPEG T+QS DPEG T++
Sbjct: 76  ------GGCTYQSSDPEGYTYQSGDPEGYTYQSSDPEGYTYQSSDPEGCTYQ 114

[Close]

BLAST of PI0025704 vs. ExPASy TrEMBL
Match: A0A5D3CQG9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001380 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-10
Identity = 51/113 (45.13%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKG--ETTIKLGN-----ISLGIPKE 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G  E T +  +          P+ 
Sbjct: 10  YGLHASFLPLIGLPLAVPLLEKLKKRKGEYKIYPSSGSVERTHQSRDPEGCTYQSSDPEG 69

Query: 71  FHNTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTH 117
           +      P G   QS DPEG TYQS GP     QS DPEG T+QS DPEG T+
Sbjct: 70  YTYQSSDPEGCTYQSSDPEGCTYQSSGPEGCTYQSSDPEGCTYQSSDPEGYTY 122

[Close]

BLAST of PI0025704 vs. ExPASy TrEMBL
Match: A0A5A7THB9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00420 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-10
Identity = 48/107 (44.86%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFHNTVWR 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G               E  +    
Sbjct: 4   YGLHASFLPLVGLPLAVPLPEKLKKRKGEYKIYPSSGSV-------------ECTHQSRD 63

Query: 71  PGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
           P G   QS DPEG TYQS  P     QS DPEG T+QS DPEG T++
Sbjct: 64  PEGCTYQSSDPEGYTYQSSDPEGCTYQSNDPEGCTYQSSDPEGCTYQ 97

[Close]

BLAST of PI0025704 vs. ExPASy TrEMBL
Match: A0A5D3DEU2 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00780 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-10
Identity = 51/119 (42.86%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKG------------ETTIKLGNISL 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G            E T +  N   
Sbjct: 4   YGLHASFLPLVGLPLDVPLPEKLKRKKGEYEIYPSSGSVERTHQSHDPEECTYQSSN--- 63

Query: 71  GIPKEFHNTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
             P+ +      P G   QS DPEG TYQS  P+    QS DPEG T+QS DPEG T++
Sbjct: 64  --PEGYTYQSSDPEGYTYQSSDPEGCTYQSTDPKGCTYQSSDPEGCTYQSSDPEGCTYQ 117

[Close]

BLAST of PI0025704 vs. ExPASy TrEMBL
Match: A0A5A7U8M0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00970 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-10
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFHNTVWR 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G  +I+  + S    ++     ++
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKLKRRKGEYKIYPSSG--SIERTHQS----RDLRGCTYQ 80

Query: 71  ---PGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
              P G   QSGDPEG TYQS  P     QS DPEG  +QS DPEG T++
Sbjct: 81  SSDPEGYTYQSGDPEGYTYQSSDPEGYTYQSSDPEGCMYQSSDPEGYTYQ 124

[Close]

BLAST of PI0025704 vs. NCBI nr
Match: KAA0054223.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 9.3e-11
Identity = 50/112 (44.64%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 6   SKRLHYDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFH 65
           ++R  Y  H S LPL GLPL +PL  K+K  KGEY    S G       +  L       
Sbjct: 16  NQRRPYGLHASFLPLVGLPLAVPLPEKLKRRKGEYKIYRSSGSVECTHQSRDL------- 75

Query: 66  NTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
                 GG   QS DPEG TYQSG P     QS DPEG T+QS DPEG T++
Sbjct: 76  ------GGCTYQSSDPEGYTYQSGDPEGYTYQSSDPEGYTYQSSDPEGCTYQ 114

[Close]

BLAST of PI0025704 vs. NCBI nr
Match: TYK13632.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-10
Identity = 51/113 (45.13%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKG--ETTIKLGN-----ISLGIPKE 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G  E T +  +          P+ 
Sbjct: 10  YGLHASFLPLIGLPLAVPLLEKLKKRKGEYKIYPSSGSVERTHQSRDPEGCTYQSSDPEG 69

Query: 71  FHNTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTH 117
           +      P G   QS DPEG TYQS GP     QS DPEG T+QS DPEG T+
Sbjct: 70  YTYQSSDPEGCTYQSSDPEGCTYQSSGPEGCTYQSSDPEGCTYQSSDPEGYTY 122

[Close]

BLAST of PI0025704 vs. NCBI nr
Match: KAA0032963.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-09
Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKG--ETTIKLGNISLGIPKEFHNTV 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S    E T +  +     P+ +    
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKIKRKKGEYKIYPSSDFVERTHQSRD-----PEGYTYQS 80

Query: 71  WRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
             P G   QS DPEG TYQS  P     QS DPEG T+QS DPEG T++
Sbjct: 81  SDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDPEGYTYQ 124

[Close]

BLAST of PI0025704 vs. NCBI nr
Match: KAA0051456.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK22201.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-09
Identity = 51/119 (42.86%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKG------------ETTIKLGNISL 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G            E T +  N   
Sbjct: 4   YGLHASFLPLVGLPLDVPLPEKLKRKKGEYEIYPSSGSVERTHQSHDPEECTYQSSN--- 63

Query: 71  GIPKEFHNTVWRPGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
             P+ +      P G   QS DPEG TYQS  P+    QS DPEG T+QS DPEG T++
Sbjct: 64  --PEGYTYQSSDPEGYTYQSSDPEGCTYQSTDPKGCTYQSSDPEGCTYQSSDPEGCTYQ 117

[Close]

BLAST of PI0025704 vs. NCBI nr
Match: KAA0049951.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK07683.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-09
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 11  YDHHVSLLPLAGLPLILPLTVKVKHGKGEYTHILSKGETTIKLGNISLGIPKEFHNTVWR 70
           Y  H S LPL GLPL +PL  K+K  KGEY    S G  +I+  + S    ++     ++
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKLKRRKGEYKIYPSSG--SIERTHQS----RDLRGCTYQ 80

Query: 71  ---PGGSPNQSGDPEGSTYQSGGPRVVPKQSGDPEGSTHQSGDPEGNTHK 118
              P G   QSGDPEG TYQS  P     QS DPEG  +QS DPEG T++
Sbjct: 81  SSDPEGYTYQSGDPEGYTYQSSDPEGYTYQSSDPEGCMYQSSDPEGYTYQ 124

The following BLAST results are available for this feature:

BLAST of PI0025704 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDY6	4.5e-11	44.64	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CQG9	2.2e-10	45.13	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7THB9	8.5e-10	44.86	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DEU2	8.5e-10	42.86	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7U8M0	8.5e-10	44.55	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of PI0025704 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054223.1	9.3e-11	44.64	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
TYK13632.1	4.6e-10	45.13	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0032963.1	1.8e-09	44.95	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0051456.1	1.8e-09	42.86	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK22201.1 NBS-LRR t...	[more]
KAA0049951.1	1.8e-09	44.55	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK07683.1 NBS-LRR t...	[more]

BLAST of PI0025704 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025704.1	PI0025704.1	mRNA