PI0025623 (gene) Melon (PI 482460) v1

Overview


Name	PI0025623
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr12: 17226207 .. 17227075 (-)
RNA-Seq Expression	PI0025623
Synteny	PI0025623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATAGTGCAAGAAGAAGTAATCGATTAAGAGCTTCATGGGTGATTGGAAGAGGGACTAGACAATTTGAAACTATCGAAACTTTGAGTAGTTCTGAAGAGGTATTCTCTTTAGTAAAAATGTAGTTCTGAATTTCATCCTATTAATTCAATATGTTTGTTTATATAGGAAACAAACACCCAAATGGAAGCACCGTTAGTTGATAAATCGAAAGTAAAAGGAATGAAGAAGAGAGAAAGATCGGAAGTAGGTGTTTTGATGGTAACAACCAAAAAACCAAAGACAAAAGGTAAACAAATTATAATTTATCACATTTATCACATACTACCTACTATATGCTTTACATTGTTTTACAGGGTATAAAGAAACCAAAAGAAGTTAAAAGAAAGGGAAAAGAAGTTGTGGATGAAGAAGAGAAGGTACTAACATATCTTATGCTTTGGCCATTATGCTCTAATTATACTTTAATAACTTTTTCCATCAATTGGTGTCCACTGTCTTATACTTTTCAACATAATATGATTTACATGTAATTATTTGAAATGTAGGATCAAAGTAACAAGTTAGAAGATAGTGAAGATAATACAGAAAACAAAGAGCAAACAGAAAGCAAGGAAGATATTGGTGAACAATCAGAAAATCATGAAGAGATTGTTTCTAAACCACAGAAGACACCAATTGTTGAAGAAAAAGTAAAAAAGGTAGCGTTCTTTTGTATGCTTTATAAAATAGATGTATGTAATACTTAATAGAATGTTTAACCTTGAAGGCAAGAGTTAAAAAAGATAGTGAAAGATCAAGGAAGACGAAACAAGATCAAGGAAAAGCTGTGAGTATTGGAGAAAGAAGTGAGGTTTGTAATACATAA

mRNA sequence

ATGCATAGTGCAAGAAGAAGTAATCGATTAAGAGCTTCATGGGTGATTGGAAGAGGGACTAGACAATTTGAAACTATCGAAACTTTGAGTAGTTCTGAAGAGGAAACAAACACCCAAATGGAAGCACCGTTAGTTGATAAATCGAAAGTAAAAGGAATGAAGAAGAGAGAAAGATCGGAAGTAGGTGTTTTGATGGGTATAAAGAAACCAAAAGAAGTTAAAAGAAAGGGAAAAGAAGTTGTGGATGAAGAAGAGAAGGATCAAAGTAACAAGTTAGAAGATAGTGAAGATAATACAGAAAACAAAGAGCAAACAGAAAGCAAGGAAGATATTGGTGAACAATCAGAAAATCATGAAGAGATTGTTTCTAAACCACAGAAGACACCAATTGTTGAAGAAAAAGTAAAAAAGGCAAGAGTTAAAAAAGATAGTGAAAGATCAAGGAAGACGAAACAAGATCAAGGAAAAGCTGTGAGTATTGGAGAAAGAAGTGAGGTTTGTAATACATAA

Coding sequence (CDS)

ATGCATAGTGCAAGAAGAAGTAATCGATTAAGAGCTTCATGGGTGATTGGAAGAGGGACTAGACAATTTGAAACTATCGAAACTTTGAGTAGTTCTGAAGAGGAAACAAACACCCAAATGGAAGCACCGTTAGTTGATAAATCGAAAGTAAAAGGAATGAAGAAGAGAGAAAGATCGGAAGTAGGTGTTTTGATGGGTATAAAGAAACCAAAAGAAGTTAAAAGAAAGGGAAAAGAAGTTGTGGATGAAGAAGAGAAGGATCAAAGTAACAAGTTAGAAGATAGTGAAGATAATACAGAAAACAAAGAGCAAACAGAAAGCAAGGAAGATATTGGTGAACAATCAGAAAATCATGAAGAGATTGTTTCTAAACCACAGAAGACACCAATTGTTGAAGAAAAAGTAAAAAAGGCAAGAGTTAAAAAAGATAGTGAAAGATCAAGGAAGACGAAACAAGATCAAGGAAAAGCTGTGAGTATTGGAGAAAGAAGTGAGGTTTGTAATACATAA

Protein sequence

MHSARRSNRLRASWVIGRGTRQFETIETLSSSEEETNTQMEAPLVDKSKVKGMKKRERSEVGVLMGIKKPKEVKRKGKEVVDEEEKDQSNKLEDSEDNTENKEQTESKEDIGEQSENHEEIVSKPQKTPIVEEKVKKARVKKDSERSRKTKQDQGKAVSIGERSEVCNT

Homology

The following BLAST results are available for this feature:

BLAST of PI0025623 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025623 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025623 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025623 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025623.1	PI0025623.1	mRNA