PI0025616 (gene) Melon (PI 482460) v1

Overview
NamePI0025616
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Locationchr11: 24362052 .. 24363835 (-)
RNA-Seq ExpressionPI0025616
SyntenyPI0025616
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTTGCAGAGTTTGGCGAGCTGATGAATGTGGTAAAGCACGCGAGCTTGGTAAGTCAGCTGAATATGAGCCTTGGTGATTTGGTGCTGAATGAGGCGTGCGGTGAAGTATGAAGTGTACTTCTGAAAGTTGAGGTGTTCGCGAGGCTCAATGTTGGAAGATAATGTCTTGTGGCGGAGGCAGAACACGTTGAGCCATGCGACTGTGAGCAGTGTGTAACTTTGCCGCGAAGAAGGTTTTGAATTCCTTTAAGGGAGGTTACTGTTTTGCCTTTGATTCTGTAGTTGGTCATTTTGTTCGCAAGGAGTGTGTTTTAGCTCATTTTAGTGTCTTAAAGCTTGTATATGGGTCTAGTATCATATCCTATATAAAAATACAACATTGATGAGTATTTGAAGCTTATTATGAAGATTTAGGATAGTTATTTTTATTCAAAAATAGTTCTATCAATGTTAAACAATTATCTCCTCAAAATAGCTAAAATGATGACAAATCATGACGAACCATGTATCTACTAGTTTTCTTGAACATTGTTTATACGTATTCCATTTTGATTTTGAGTTTTAAATGTTTTTGTTTATTCATTTTGATTTTCATTTCTACAGGTACTATATTAACCCTGAACATACACCACAAGGCAGACCATGAGTTCCGTGAGTTTGATATATCCCCTCACATGGGATCTTAGGTGGGTGATACTTTAGGTTAGTTCCATGAGTTAGGTGACACTTCAGGTGAGTTCCATGCGTTCCATGAGTTAGTACTAATACTTTTTTCTCATATGGCTGCTTTTCATCCATTCGTAGGACACACAAGCACTACAGAACATTGAGTTGGAGAAATATGTCAACAAACATGGAAACATTACAATCTCCATCACACCAGGGGCAGAGAAGCCAATTTCTCCACATGTTGTTCGGTTCAATAACACAATTGGTGTGGCGGTCAGAGATTGTTTTCCAGTCTGGTGTCATACAAATTCAGAGGTTCCACATGAATATATCGAGATGCTAATGGTGATTTGTTGGTAAGTTTATGAGTTTTGGGTCTTTTACACTTAAAGAGTACACATAACCTAATCCATGACTTTTCTATTTTTGTAGCGATATTGCGTGCTTCATTTCTTAGATCCCACACTTAATAAATTTATCGAACGACAAATGTCGACCTTGTTCAAAGAATATAGAGTCGATTTGCACAAACATAATATGAAATGTGGCGACCTTGAGCAAGCACGTGCTAAACTGCCTACCAGATTGAAGAATTGTTTAGAAGATTGGAATTTTTTGTGCGACTGTTTTCTAAGTGAAGGATTTCAAGTGATTTACATCCTTTAATATATCACTTTTTTATAAGTAACTTACTTAATGTGTTATTTTTGTTGTTTGAATGTAGGAGCAATGAAAGACTAACAAGCAGAATAGAGAAAAACAACAATTCCATCATAGTAGCGGGTCAAAGTTGTTTCTACAAAGACAATCTAAGCTTAGTGAACAACAAGGTGAACTAGTGGGACGTGTGGATCTATTCAAAGAAACGCACTCCAATAAGAGTGGTCAGTTCGTGAATTAGGTAGTTAAGGATGCACATGTAAGTAATATGGTTTATTTTCTAGTTGTTTTGAGTGCATAGCTTAACTAATTGTTTGCAGAATCAAATGGTAGAATTACTATCGACACCCACTCCAGAAGGTTCTCAACCACTATCAAGAGACGAAATATACGAGATAGTTTTGGGTAGGCGACCTAGTTATTCAAAAGGTCTTGGGTTGGTTCCTTAA

mRNA sequence

ATGATGCTTGCAGAGTTTGGCGAGCTGATGAATGTGGTAAAGCACGCGAGCTTGGTAAGTCAGCTGAATATGAGCCTTGGTGATTTGGTGCTGAATGAGGCGTGCGGTGAAGACACACAAGCACTACAGAACATTGAGTTGGAGAAATATGTCAACAAACATGGAAACATTACAATCTCCATCACACCAGGGGCAGAGAAGCCAATTTCTCCACATGTTGTTCGGTTCAATAACACAATTGGTGTGGCGGTCAGAGATTGTTTTCCAGTCTGGTGTCATACAAATTCAGAGGTTCCACATGAATATATCGAGATGCTAATGGTGATTTGTTGGAGCAATGAAAGACTAACAAGCAGAATAGAGAAAAACAACAATTCCATCATAGTAGCGGGTCAAAGTTGTTTCTACAAAGACAATCTAAGCTTAGTGAACAACAAGAATCAAATGGTAGAATTACTATCGACACCCACTCCAGAAGGTTCTCAACCACTATCAAGAGACGAAATATACGAGATAGTTTTGGGTAGGCGACCTAGTTATTCAAAAGGTCTTGGGTTGGTTCCTTAA

Coding sequence (CDS)

ATGATGCTTGCAGAGTTTGGCGAGCTGATGAATGTGGTAAAGCACGCGAGCTTGGTAAGTCAGCTGAATATGAGCCTTGGTGATTTGGTGCTGAATGAGGCGTGCGGTGAAGACACACAAGCACTACAGAACATTGAGTTGGAGAAATATGTCAACAAACATGGAAACATTACAATCTCCATCACACCAGGGGCAGAGAAGCCAATTTCTCCACATGTTGTTCGGTTCAATAACACAATTGGTGTGGCGGTCAGAGATTGTTTTCCAGTCTGGTGTCATACAAATTCAGAGGTTCCACATGAATATATCGAGATGCTAATGGTGATTTGTTGGAGCAATGAAAGACTAACAAGCAGAATAGAGAAAAACAACAATTCCATCATAGTAGCGGGTCAAAGTTGTTTCTACAAAGACAATCTAAGCTTAGTGAACAACAAGAATCAAATGGTAGAATTACTATCGACACCCACTCCAGAAGGTTCTCAACCACTATCAAGAGACGAAATATACGAGATAGTTTTGGGTAGGCGACCTAGTTATTCAAAAGGTCTTGGGTTGGTTCCTTAA

Protein sequence

MMLAEFGELMNVVKHASLVSQLNMSLGDLVLNEACGEDTQALQNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
Homology
BLAST of PI0025616 vs. ExPASy TrEMBL
Match: A0A5A7TBG7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00370 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24
Identity = 77/187 (41.18%), Postives = 105/187 (56.15%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I  GA+KPISPH VRF+ TIGV VR  FPV C   ++V  EYIE
Sbjct: 166 LELERHVAINGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLKWADVGREYIE 225

Query: 105 M-------LMVICW-------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNK---- 164
           +       L+V+ +       SN   T  +++++ +II+AG S FY D++S +  K    
Sbjct: 226 VVKGDLQRLVVLDFNDQAMNKSNHGQTRLLDRSSLTIIIAGPSRFYNDSMSSLREKESQS 285

Query: 165 -------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYS 189
                                    NQM++L S PT +GSQPLS DEI + VLGRRP YS
Sbjct: 286 IVWSCSEKHTFELGRSCRRPFEDAHNQMLKLQSQPTLKGSQPLSEDEICDQVLGRRPCYS 345

BLAST of PI0025616 vs. ExPASy TrEMBL
Match: A0A5A7SII7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003110 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-24
Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 0

Query: 43  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEY 102
           Q +ELE YV+ +G I++ I P AEK IS H VRFN  IGV +R   PV C   ++V  EY
Sbjct: 489 QLLELEYYVHANGWISMWIAPSAEKSISSHAVRFNQAIGVCIRKTVPVRCFRWADVGREY 548

Query: 103 IEMLM--VICW-----------------------------------SNERLTSRIEKNNN 162
           IE++   + C+                                   SN      +++++ 
Sbjct: 549 IEVVKGDLQCFFVFDFNDQAMNRFVEHQMLSTFKEFRGDCYKHFKKSNHGPIQLLDRSSL 608

Query: 163 SIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLG 189
           +II AG+ C Y ++ SL+N +NQM+EL S PTP+G QPL RDEI E +LGRR  Y KGLG
Sbjct: 609 TIIAAGRKCLYNNSTSLLNKENQMLELKSQPTPDGFQPLYRDEICETMLGRRSGYLKGLG 668

BLAST of PI0025616 vs. ExPASy TrEMBL
Match: A0A5A7SXY7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00420 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23
Identity = 70/156 (44.87%), Postives = 97/156 (62.18%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I PGAEKPIS H VRF+  I V +R  FPV C   ++V  EYIE
Sbjct: 49  LELERHVVINGCIPMTIAPGAEKPISSHAVRFSQVIDVCMRKTFPVRCLKWADVGREYIE 108

Query: 105 M-------LMVICWSNERLTSRIEKNN----NSIIVAGQSC-FYKDNLSLVNNKNQMVEL 164
           +       L V+ ++++ + S +E+      N+++   +   F  D+      +NQM+EL
Sbjct: 109 VVKGDLQGLFVLDFNDQAMNSNLEEARANPPNALVGRDEDWHFLCDHFINRAFQNQMLEL 168

Query: 165 LSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP 189
            S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Sbjct: 169 QSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGP 204

BLAST of PI0025616 vs. ExPASy TrEMBL
Match: A0A5A7TT86 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00010 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE YV  +  I ++I PGAEKPISPH VRF+  IGV VR  FP  C   ++V  EYIE
Sbjct: 49  LELECYVAINERIPMTIAPGAEKPISPHAVRFSQVIGVCVRKTFPARCLKWADVGREYIE 108

Query: 105 ML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGS 164
           ++   + +     +   R+E    + + AG       + ++ +  NQM+EL S PTP+GS
Sbjct: 109 VVKGDLQLAERRGQPVDRVELFRETHVRAGTFV----SQAVEDAHNQMLELQSQPTPDGS 168

Query: 165 QPLSRDEIYEIVLGRRPSYSKGLGLVP 189
           QP S DEI + VLGRRP YSKGLG  P
Sbjct: 169 QPPSEDEICDQVLGRRPGYSKGLGWGP 191

BLAST of PI0025616 vs. ExPASy TrEMBL
Match: A0A5A7TG94 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001610 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 73/199 (36.68%), Postives = 96/199 (48.24%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I PGAEKPISPHVVRF+  IG+ VR  FPV C   + V  EYIE
Sbjct: 103 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGMCVRKTFPVRCLKWANVGREYIE 162

Query: 105 MLMVICWSNERLTSRIEKN-----------------------------NNSII------- 164
            L V+ +++  +   +E                                N+++       
Sbjct: 163 RLFVLDFNDRAMNRFVEHQMLTTFKEFRTDCHRHFKKYSDPEEARANPPNALVGRDKNWY 222

Query: 165 ------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEI 189
                              +G   F +    L  +  NQM+EL S PTPEGSQPLS DEI
Sbjct: 223 FLCDHYISRAFQKQPYNHSSGSKSFLQRQYELTEDAHNQMLELQSQPTPEGSQPLSEDEI 282

BLAST of PI0025616 vs. NCBI nr
Match: KAA0038961.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-24
Identity = 77/187 (41.18%), Postives = 105/187 (56.15%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I  GA+KPISPH VRF+ TIGV VR  FPV C   ++V  EYIE
Sbjct: 166 LELERHVAINGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLKWADVGREYIE 225

Query: 105 M-------LMVICW-------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNK---- 164
           +       L+V+ +       SN   T  +++++ +II+AG S FY D++S +  K    
Sbjct: 226 VVKGDLQRLVVLDFNDQAMNKSNHGQTRLLDRSSLTIIIAGPSRFYNDSMSSLREKESQS 285

Query: 165 -------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYS 189
                                    NQM++L S PT +GSQPLS DEI + VLGRRP YS
Sbjct: 286 IVWSCSEKHTFELGRSCRRPFEDAHNQMLKLQSQPTLKGSQPLSEDEICDQVLGRRPCYS 345

BLAST of PI0025616 vs. NCBI nr
Match: KAA0025990.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 8.8e-24
Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 0

Query: 43  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEY 102
           Q +ELE YV+ +G I++ I P AEK IS H VRFN  IGV +R   PV C   ++V  EY
Sbjct: 489 QLLELEYYVHANGWISMWIAPSAEKSISSHAVRFNQAIGVCIRKTVPVRCFRWADVGREY 548

Query: 103 IEMLM--VICW-----------------------------------SNERLTSRIEKNNN 162
           IE++   + C+                                   SN      +++++ 
Sbjct: 549 IEVVKGDLQCFFVFDFNDQAMNRFVEHQMLSTFKEFRGDCYKHFKKSNHGPIQLLDRSSL 608

Query: 163 SIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLG 189
           +II AG+ C Y ++ SL+N +NQM+EL S PTP+G QPL RDEI E +LGRR  Y KGLG
Sbjct: 609 TIIAAGRKCLYNNSTSLLNKENQMLELKSQPTPDGFQPLYRDEICETMLGRRSGYLKGLG 668

BLAST of PI0025616 vs. NCBI nr
Match: KAA0035423.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 4.4e-23
Identity = 70/156 (44.87%), Postives = 97/156 (62.18%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I PGAEKPIS H VRF+  I V +R  FPV C   ++V  EYIE
Sbjct: 49  LELERHVVINGCIPMTIAPGAEKPISSHAVRFSQVIDVCMRKTFPVRCLKWADVGREYIE 108

Query: 105 M-------LMVICWSNERLTSRIEKNN----NSIIVAGQSC-FYKDNLSLVNNKNQMVEL 164
           +       L V+ ++++ + S +E+      N+++   +   F  D+      +NQM+EL
Sbjct: 109 VVKGDLQGLFVLDFNDQAMNSNLEEARANPPNALVGRDEDWHFLCDHFINRAFQNQMLEL 168

Query: 165 LSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP 189
            S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Sbjct: 169 QSQPTPEGSQPLSEDEICDQVLGRRPGYSKGLGWGP 204

BLAST of PI0025616 vs. NCBI nr
Match: KAA0046642.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-22
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE YV  +  I ++I PGAEKPISPH VRF+  IGV VR  FP  C   ++V  EYIE
Sbjct: 49  LELECYVAINERIPMTIAPGAEKPISPHAVRFSQVIGVCVRKTFPARCLKWADVGREYIE 108

Query: 105 ML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGS 164
           ++   + +     +   R+E    + + AG       + ++ +  NQM+EL S PTP+GS
Sbjct: 109 VVKGDLQLAERRGQPVDRVELFRETHVRAGTFV----SQAVEDAHNQMLELQSQPTPDGS 168

Query: 165 QPLSRDEIYEIVLGRRPSYSKGLGLVP 189
           QP S DEI + VLGRRP YSKGLG  P
Sbjct: 169 QPPSEDEICDQVLGRRPGYSKGLGWGP 191

BLAST of PI0025616 vs. NCBI nr
Match: TYK05628.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-21
Identity = 73/199 (36.68%), Postives = 96/199 (48.24%), Query Frame = 0

Query: 45  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIE 104
           +ELE++V  +G I ++I PGAEKPISPHVVRF+  IG+ VR  FPV C   + V  EYIE
Sbjct: 103 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGMCVRKTFPVRCLKWANVGREYIE 162

Query: 105 MLMVICWSNERLTSRIEKN-----------------------------NNSII------- 164
            L V+ +++  +   +E                                N+++       
Sbjct: 163 RLFVLDFNDRAMNRFVEHQMLTTFKEFRTDCHRHFKKYSDPEEARANPPNALVGRDKNWY 222

Query: 165 ------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEI 189
                              +G   F +    L  +  NQM+EL S PTPEGSQPLS DEI
Sbjct: 223 FLCDHYISRAFQKQPYNHSSGSKSFLQRQYELTEDAHNQMLELQSQPTPEGSQPLSEDEI 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TBG71.9e-2441.18CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7SII74.3e-2439.34CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7SXY72.1e-2344.87CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TT861.4e-2245.58CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TG942.0e-2136.68CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
KAA0038961.13.9e-2441.18CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0025990.18.8e-2439.34CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0035423.14.4e-2344.87CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0046642.12.8e-2245.58CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK05628.14.1e-2136.68CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025616.1PI0025616.1mRNA