PI0025478 (gene) Melon (PI 482460) v1

Overview


Name	PI0025478
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CS domain-containing protein
Location	chr09: 282070 .. 286159 (+)
RNA-Seq Expression	PI0025478
Synteny	PI0025478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGGACCGATCTTTTCCAGCGATTTGGCAATTCCGTTAGCGTTTGTCCTCCATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAGATCCCAAAGCCAAAGAAGCCTTCCTCCTCTTCCTCTTCATCATCTTCTTCATCGGCTAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAACCCTCTAGGGTTCTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTAGTACGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGCAGGAAGCTACGCCGGTGAAGGCTGTTGCATCACCGCCGGAAGAGAAGGTGGCTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGCCAAGAGGTGAGCATTCCTCTTCCTCTACTTGTTTGTTCTCTATTATGTCAAATTGTTATTTGTTTTGGATTGACTTTATTGATCTCATACTATCTGGAAGAGGTAAAGTGAGGGTAAACATTGATTAATTAAAATGATTGTTTGTTCTTAAATCTCAGTCAGTCAAGTGTGGTTAGATTTAACTGTTAATTGTGCTTTCAACAGGCAAGGTCTAGCAATGGTAGTGAAGAAATTTGCATTGGTGATGTAGCATTAGGGACAGCAGTTCTATATTTCTTAGTTTGAATCGTCAATGGTTTTAGTTTGTAGTTTGCCAGTTGTTTACTTGGTTAGAGGGGTGTAGGTTAATCATAATAAATATTCATCCATATCTTGTCCGAGACTCCCTCCTTTGAAATCACAGTTCGACCTTTTCAGTTGTTCAATGTGGCTTCGAGTTTACAAGTCTTGATTGAATTTTAAGTTTAGAAGTGAAATATTTGAAATACTATTCTATTCTAGCCATATCACGAGTTAGAAGTTGTATCAATTTTTAAGGGGCATTTGGAGAGCTGAGTTAATTATTATAGTCTATGAGTTTAAATAGTTTGTGATTCGGTTGCAGAGGATTTTAGTCTCATTACGAGGGGCGTGAAACGGTAATACAGTAGGTAATTGTAGGTTATAATAATTGGGAACACCAACTACTATAATTGGAGCCCTAAACGATAGCCCACCCCTCAAGGTGCCCAAACTCTTCCTAGCGAGTTCAAGTAAATGGTTTAAGTTGATTTATTTGGAATATGTGTATGTGTGGATATTGGAAACCATTCTTCAGTTGAGTAAACTTACATGGACGATGTGACTGCTGATGTGGAGTTTGGAATTTATCATTTTGGATTGAGCATGATAATCTCTTCATGCAGTTCGATAGTTTGTCTTTTCTTTTCATAAGCATATGCATCTGAACAAGATGTCTAGAATTCCTCTGGAACTTGGAATTCAGTGTGAGGCTTATCATATCAAATTTGTGAAAAAAATCTTTTGTGTTGTGAGTTCAACTGACTGACCCTATCTTTTGTTTCTAAACTGAATGTCATCTCAACGTTGTTTCTTACTTCTAATGGCTTTTGCAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTTTTCCACAGAATCTTATTTGCACAGGGTGTTATTTTTTATTTTCAAGTTCTAAATTATTATCACATGCTTGCAGGGAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTTTAAAGTTTTGTTCAAAAAGAAGTGTGAATAATGTTAAATTCTCTTTTAGATATGGTTTATTTTATGCTGCTCAAGTCCTTGGGAGTTGATAGCATAAATAACAAGGGTGGATGCATAAAGTTAATTGAAAGCAGTTTTTTGTGTTCACTTGGGTATTGAAGTTTTTGTGTTTATTATTTGATCATGTTTATGTTGATACTTGCTGCAGAGGATGAGAGCATCATTTCTATTCTTTTGACTAAGCACAACCAGATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGGTATGTATTTTGGTCGTCTATTTTCTATCTATTGCACTGCACTTATGGTTTTGTTATATTAAGGTTTTTCCTCTTCGATGTATATTTATTATTCTTCTGCATAACAAGTTTTGCCGACATGTGCACTAACATGCAAAAAGAAAAAGAAATACAATTAAATGTAGCGTTTGGGAGGGGATATTTCATGAAGCAATTTTTCTGGATAAATGAAAGGTTACAAGCATTATTTGTTCACTTCGGTTGGTTCTCATAAAACAGCCAAGAAATTTACAGTCCAAATCCCATCAGTAGTTTAGCCACAAAGAAAGAAAAAAAAATAAAAAAAAGAAAATCTTAGTCTCCTCCCAATATATACACTTTCCTTCACAATTCTCTAATTACTTCATACCAAACCTCGTACGCTTGCCTATGTGCCTTAATATCATTTGACCCGTTGCACATTATGCCTCAGTGGGCTTTTTAAATCTCAGTCTCTCTCTTCCCGTCCTGAATGTGAAACCTCAAGTATGATATGGCTAAGAGTCACAGATCTTAAGTGACTTTGTGATAGAAACCAAATATATTGAAACATATAAAATAATGATATTATTATATTACTAGTGAACTACAACGTAATTTGAGGCACTTAGAACCTCCTCACTCTTGAGATATGATAAGTTTTAACTATGCTCCATATTAACGTTGGAGTTAAATCTCCCTCATCAAATCATGTTTGCGAAGGAAAATTATATTTTATGATTGATTTATGAACTACATTTGTGTTATCAGAGACACCTCTCAGAGATGATGTGTTCTTGGTCTTGGCATTTGCAATTCTCAATTAATCTAGACTCATGCCTGATTATGCTATCTAATTTCTTGTTGTTCAACGAGTTTTTTAAGTTTGTTTTTTGGTGGCATATCCTTATGCATTGGCCATTGGTTGATGCGTGCGTTCATAACTGTTGCTATATGATATTATTTTACAATAAATTGATGATCTGTCGGAAATTTTTTACAGTTCGATCAAAGGCAGAAATCTATGGGACTCCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTCATGTCTGAGGTGATTGTTTAGAGCTGTGTGCGTGTGTTTGTTTTTGGTTTATAATATCCTACTGGTTCTTTTATTGAACCTCTGAAATTGGTCCCATGCAGCATCCGGAGATGGACTTCTCAAGGGCAAAGATATCGTAAATGGAACTGCCCGATTCTTTGACGTATAGATAAGAGAACCCAAAGAAGGAAAAAAACCAAAACATTTATAGTTTTTGTTCAGGGCTGGAAAGTTTTGTGCTTTTTTAGCGAGGTTTGAATTCTCATGTCGGTTCTTTATTATCTAGAAGAAATGAGGACATTTTCTAGATTATGAGAATGGCAGTGTGAACAAAACGGGATTTTGTTATGATGTGTTTATGGAATTAAGTTTTACCATTTTATTTTTCATGATGATTTAGATGGGCTTTTTTCCTATTGTGGGCTAAAACTCCATGTTGGATCCGAGTGAAAAGCCCATGGGCTCATGGGTTCATGGGTTCATGGGTTCATTCCAATTCAGAGAACAATCTTTTCGTGATAACGAACAGATAACTATATTTATTTCAATCCAAGTTTGATCTTTGTCAATGGCATTTAGAAGATAGAAGAACATGCATGATTTGGTTAATTGTTTGGAGACTTCGGTAACTTCAATCCAATAAATAAATATTTTATTACATTCTTAGTTCTATGAAACAAAATACTGCAGAAGTAGTATTTGCTCGACTGGGATTTCCTTTGCTTTTCCAAATTTTT

mRNA sequence

AAGTGGACCGATCTTTTCCAGCGATTTGGCAATTCCGTTAGCGTTTGTCCTCCATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAGATCCCAAAGCCAAAGAAGCCTTCCTCCTCTTCCTCTTCATCATCTTCTTCATCGGCTAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAACCCTCTAGGGTTCTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTAGTACGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGCAGGAAGCTACGCCGGTGAAGGCTGTTGCATCACCGCCGGAAGAGAAGGTGGCTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGCCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCATTTCTATTCTTTTGACTAAGCACAACCAGATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAATCTATGGGACTCCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTCATGTCTGAGCATCCGGAGATGGACTTCTCAAGGGCAAAGATATCGTAAATGGAACTGCCCGATTCTTTGACGTATAGATAAGAGAACCCAAAGAAGGAAAAAAACCAAAACATTTATAGTTTTTGTTCAGGGCTGGAAAGTTTTGTGCTTTTTTAGCGAGGTTTGAATTCTCATGTCGGTTCTTTATTATCTAGAAGAAATGAGGACATTTTCTAGATTATGAGAATGGCAGTGTGAACAAAACGGGATTTTGTTATGATGTGTTTATGGAATTAAGTTTTACCATTTTATTTTTCATGATGATTTAGATGGGCTTTTTTCCTATTGTGGGCTAAAACTCCATGTTGGATCCGAGTGAAAAGCCCATGGGCTCATGGGTTCATGGGTTCATGGGTTCATTCCAATTCAGAGAACAATCTTTTCGTGATAACGAACAGATAACTATATTTATTTCAATCCAAGTTTGATCTTTGTCAATGGCATTTAGAAGATAGAAGAACATGCATGATTTGGTTAATTGTTTGGAGACTTCGGTAACTTCAATCCAATAAATAAATATTTTATTACATTCTTAGTTCTATGAAACAAAATACTGCAGAAGTAGTATTTGCTCGACTGGGATTTCCTTTGCTTTTCCAAATTTTT

Coding sequence (CDS)

ATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAGATCCCAAAGCCAAAGAAGCCTTCCTCCTCTTCCTCTTCATCATCTTCTTCATCGGCTAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAACCCTCTAGGGTTCTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTAGTACGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGCAGGAAGCTACGCCGGTGAAGGCTGTTGCATCACCGCCGGAAGAGAAGGTGGCTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGCCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCATTTCTATTCTTTTGACTAAGCACAACCAGATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAATCTATGGGACTCCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTCATGTCTGAGCATCCGGAGATGGACTTCTCAAGGGCAAAGATATCGTAA

Protein sequence

MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS

Homology

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BLAST of PI0025478 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.1e-93
Identity = 199/321 (61.99%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+ EE+               SSSS      F A    +NPLGFLEKVFDFL  ++
Sbjct: 1   MAIISEVEEE---------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHE------ESLE-LKGKAEKRIKEEV-KSVKQEAT 120
           DFL K   E +I   VR A EK KK E      ES++ ++ KAEK I + V K V++E+ 
Sbjct: 61  DFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESV 120

Query: 121 PVKAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
                AS  E    EK +E  EE+K+E+GP VPNKGNG D++NYSW Q+LQEV VN+PVP
Sbjct: 121 KPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQ 240
            GTK+R VVCEIKKNRLKVGLKGQ P++DGEL  +VKPDDCYW+IED+ +ISILLTK +Q
Sbjct: 181 TGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKSDQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+E+QKQ
Sbjct: 241 MEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 314
           EILKKFMSEHPEMDFS AK +
Sbjct: 301 EILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of PI0025478 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.2e-83
Identity = 164/292 (56.16%), Postives = 219/292 (75.00%), Query Frame = 0


Query: 26  SSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    A+PS   F A+FDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASPPEEKV--AEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++     +  P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 PRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
           P VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 GELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 265
           GE  ++VKPDDC+W+IED+ +IS+LLTK +QMEWWKY VKG+PEIDTQKVEPE SKL DL
Sbjct: 185 GEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDL 244

Query: 266 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 314
           DPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 DPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of PI0025478 vs. ExPASy Swiss-Prot
Match: Q5ZIN1 (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-54
Identity = 136/292 (46.58%), Postives = 180/292 (61.64%), Query Frame = 0


Query: 47  GFLEK-VFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKA-----EKRI 106
           G  EK + D   +      K+R EK      R+  E+R+K E + +L  +A     E RI
Sbjct: 54  GVAEKLITDSFNHHNKLAQKERKEKK----ARQEAERREKAERAAKLAKEAKQEANEPRI 113

Query: 107 KE--------------EVKSVKQEA--TPVKAVASPPEEKVAEKLEENTEEKKE-ENGPR 166
           KE              + K  ++E    PVK+     +   + K E + EEK E + G  
Sbjct: 114 KELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNKQETDDEEKDENDKGKL 173

Query: 167 VPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 226
            PN GNG D+ NY WTQ+L E+++ +P  V    K + VV +I++ RL+VGLKG PPVID
Sbjct: 174 KPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVID 233

Query: 227 GELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 286
           GEL + VK ++  W IED   +++ L K N+MEWW  LV  DPEI+T+K+ PENSKLSDL
Sbjct: 234 GELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDL 293

Query: 287 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 314
           D ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM +HPEMDFS+AK +
Sbjct: 294 DSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341

[Close]

BLAST of PI0025478 vs. ExPASy Swiss-Prot
Match: O35685 (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.1e-53
Identity = 136/290 (46.90%), Postives = 181/290 (62.41%), Query Frame = 0


Query: 47  GFLEKVFDFLANETDFLS-KDRVEKDIETVVRRAVEKRKKHEESLEL--KGKAE------ 106
           G  EK+     N  + L+ K R EK      R+  E+R+K E +  L  + KAE      
Sbjct: 49  GMAEKLITQTFNHHNQLAQKARREKR----ARQETERREKAERAARLAKEAKAETPGPQI 108

Query: 107 --------KRIKEEVKSVK----QEATPVKAVASPPEEKVAEKLEENTEEKKEENGPRVP 166
                   +R++ E+   K    QEA         P ++ AE  +E  EE +++ G   P
Sbjct: 109 KELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAE--DEEDEEDEKDKGKLKP 168

Query: 167 NKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDGE 226
           N GNG D+ NY WTQ+L E+++ VP  V    K + VV +I++  L+VGLKGQPPV+DGE
Sbjct: 169 NLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGE 228

Query: 227 LCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDP 286
           L + VK ++  W IED  ++++ L K N+MEWW  LV  DPEI+T+K+ PENSKLSDLD 
Sbjct: 229 LYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDS 288

Query: 287 ETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 314
           ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS+AK +
Sbjct: 289 ETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332

[Close]

BLAST of PI0025478 vs. ExPASy Swiss-Prot
Match: Q63525 (Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.7e-52
Identity = 131/305 (42.95%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 53  FDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQE-- 112
           F FL  +TDF          E +  + + +   H   L  K + EKR ++E +  ++   
Sbjct: 33  FSFLRRKTDFFIGGE-----EGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAER 92

Query: 113 ----ATPVKAVASPPE-----EKVAEKL-------------------------------E 172
               A   KA    P+     ++ AE+L                               E
Sbjct: 93  AARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAENHEVQLKNGSLDSPGKQDAEE 152

Query: 173 ENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNR 232
           E  EE +++ G   PN GNG D+ NY WTQ+L E+++ VP  V    K + VV +I++  
Sbjct: 153 EEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRH 212

Query: 233 LKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDT 292
           L+VGLKGQ PVIDGEL + VK ++  W IED  ++++ L K N+MEWW  LV  DPEI+T
Sbjct: 213 LRVGLKGQAPVIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINT 272

Query: 293 QKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFS 314
           +K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS
Sbjct: 273 KKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFS 332

[Close]

BLAST of PI0025478 vs. ExPASy TrEMBL
Match: A0A5A7TGM4 (Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.6e-163
Identity = 305/313 (97.44%), Postives = 307/313 (98.08%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISDYEEKEEIPKPK+PSSSSS SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASP 120
           DFLS DRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEA P KAVASP
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVASP 120

Query: 121 PEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180
           PEEKV EKLEE TEEKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV
Sbjct: 121 PEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180

Query: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240
           VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV
Sbjct: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240

Query: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300
           KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS
Sbjct: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300

Query: 301 EHPEMDFSRAKIS 314
           EHPEMDFSRAKIS
Sbjct: 301 EHPEMDFSRAKIS 313

[Close]

BLAST of PI0025478 vs. ExPASy TrEMBL
Match: A0A1S3AUE5 (protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.6e-163
Identity = 305/313 (97.44%), Postives = 307/313 (98.08%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISDYEEKEEIPKPK+PSSSSS SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASP 120
           DFLS DRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEA P KAVASP
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVASP 120

Query: 121 PEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180
           PEEKV EKLEE TEEKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV
Sbjct: 121 PEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180

Query: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240
           VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV
Sbjct: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240

Query: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300
           KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS
Sbjct: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300

Query: 301 EHPEMDFSRAKIS 314
           EHPEMDFSRAKIS
Sbjct: 301 EHPEMDFSRAKIS 313

[Close]

BLAST of PI0025478 vs. ExPASy TrEMBL
Match: A0A0A0KQ62 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.4e-160
Identity = 303/315 (96.19%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSS--SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSS  SSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EA PVKA A
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKV EKLEENTEEKKEENG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSIEDESI+SILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 314
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 315

[Close]

BLAST of PI0025478 vs. ExPASy TrEMBL
Match: A0A6J1K9G4 (protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.5e-146
Identity = 281/320 (87.81%), Postives = 298/320 (93.12%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSS-SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60
           MAIIS+YEEKEEIPKPKKPSSSSSS  SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60

Query: 61  TDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPV----- 120
           +DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEA PV     
Sbjct: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120

Query: 121 -KAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180
            + VASPPEEKV  KLEE+TEEKKEENGPRVPN GNGLDM+NY WTQSLQEVN+NVPVPK
Sbjct: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180

Query: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240

Query: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300
           EWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300

Query: 301 ILKKFMSEHPEMDFSRAKIS 314
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of PI0025478 vs. ExPASy TrEMBL
Match: A0A6J1E8R0 (protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430428 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 280/317 (88.33%), Postives = 292/317 (92.11%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISDYEEKEEI KPK+P SSSS SSSSSAKPSQFNA+FDPSNPLGFLEKVFDFLA E+
Sbjct: 1   MAIISDYEEKEEISKPKRPFSSSSPSSSSSAKPSQFNADFDPSNPLGFLEKVFDFLAKES 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPV----KA 120
           DFLS+DR EK+IETVVRRAVEKRKKHEESLE KGKAEKRIKEEV+SVKQE   V    K 
Sbjct: 61  DFLSRDRAEKEIETVVRRAVEKRKKHEESLEHKGKAEKRIKEEVRSVKQEVKAVKEEPKT 120

Query: 121 VASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTK 180
           VASPPEEKV  KLE N+    EENGPRVPNKGNGLDMDNYSWTQ+LQEVNVNVPVPKGTK
Sbjct: 121 VASPPEEKVGMKLEGNS----EENGPRVPNKGNGLDMDNYSWTQTLQEVNVNVPVPKGTK 180

Query: 181 SRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWW 240
           SRFVVCEIKKN LKVGLKGQPPVIDGELC  VKPDDCYWSIED+S ISILLTKHNQMEWW
Sbjct: 181 SRFVVCEIKKNHLKVGLKGQPPVIDGELCQIVKPDDCYWSIEDQSTISILLTKHNQMEWW 240

Query: 241 KYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK 300
           KYLVKGDPEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
Sbjct: 241 KYLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK 300

Query: 301 KFMSEHPEMDFSRAKIS 314
           KFM+EHPEMDFSRAK+S
Sbjct: 301 KFMAEHPEMDFSRAKLS 313

[Close]

BLAST of PI0025478 vs. NCBI nr
Match: XP_008437594.1 (PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucumis melo var. makuwa] >TYK05956.1 protein BOBBER 1 [Cucumis melo var. makuwa])

HSP 1 Score: 582.8 bits (1501), Expect = 1.8e-162
Identity = 305/313 (97.44%), Postives = 307/313 (98.08%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISDYEEKEEIPKPK+PSSSSS SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASP 120
           DFLS DRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEA P KAVASP
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVASP 120

Query: 121 PEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180
           PEEKV EKLEE TEEKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV
Sbjct: 121 PEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFV 180

Query: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240
           VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV
Sbjct: 181 VCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLV 240

Query: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300
           KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS
Sbjct: 241 KGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMS 300

Query: 301 EHPEMDFSRAKIS 314
           EHPEMDFSRAKIS
Sbjct: 301 EHPEMDFSRAKIS 313

[Close]

BLAST of PI0025478 vs. NCBI nr
Match: XP_011654620.1 (protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160
Identity = 303/315 (96.19%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSS--SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSS  SSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EA PVKA A
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKV EKLEENTEEKKEENG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSIEDESI+SILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 314
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 315

[Close]

BLAST of PI0025478 vs. NCBI nr
Match: XP_038874468.1 (protein BOBBER 1 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-154
Identity = 295/314 (93.95%), Postives = 302/314 (96.18%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI KPKKPSSSSS SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISEYEEKEEISKPKKPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASP 120
           DFLS+DRVEKDIETVVRRAVEKRKKHEES ELKGKAEKRIKEEV+S+KQE   VKAVASP
Sbjct: 61  DFLSRDRVEKDIETVVRRAVEKRKKHEESFELKGKAEKRIKEEVRSIKQE---VKAVASP 120

Query: 121 PEEKVAEKLEENT-EEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRF 180
           PEEK+  KLEENT EEKKE NGPR PN+GNGLDMDNYSWTQSLQEVNVNVPVPKGTK+RF
Sbjct: 121 PEEKLDVKLEENTEEEKKEANGPRAPNRGNGLDMDNYSWTQSLQEVNVNVPVPKGTKARF 180

Query: 181 VVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYL 240
           VVCEIKKNRLKVGLKGQPPVIDGELCH VKPDDCYWSIEDESIISILLTKHNQMEWWKYL
Sbjct: 181 VVCEIKKNRLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIISILLTKHNQMEWWKYL 240

Query: 241 VKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM 300
           VKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM
Sbjct: 241 VKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM 300

Query: 301 SEHPEMDFSRAKIS 314
           SEHPEMDFSRAKIS
Sbjct: 301 SEHPEMDFSRAKIS 311

[Close]

BLAST of PI0025478 vs. NCBI nr
Match: KAG7035749.1 (Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 529.6 bits (1363), Expect = 1.8e-146
Identity = 282/321 (87.85%), Postives = 299/321 (93.15%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSS--SSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSSS  SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEA PV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             + VASPPEEKV  KLEE+TEEKKEENGPRVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 EPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 314
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of PI0025478 vs. NCBI nr
Match: XP_022995953.1 (protein BOBBER 1-like [Cucurbita maxima])

HSP 1 Score: 528.9 bits (1361), Expect = 3.0e-146
Identity = 281/320 (87.81%), Postives = 298/320 (93.12%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSS-SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60
           MAIIS+YEEKEEIPKPKKPSSSSSS  SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60

Query: 61  TDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEATPV----- 120
           +DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEA PV     
Sbjct: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120

Query: 121 -KAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180
            + VASPPEEKV  KLEE+TEEKKEENGPRVPN GNGLDM+NY WTQSLQEVN+NVPVPK
Sbjct: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180

Query: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240

Query: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300
           EWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300

Query: 301 ILKKFMSEHPEMDFSRAKIS 314
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of PI0025478 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 2.2e-94
Identity = 199/321 (61.99%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+ EE+               SSSS      F A    +NPLGFLEKVFDFL  ++
Sbjct: 1   MAIISEVEEE---------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS 60

Query: 61  DFLSKDRVEKDIETVVRRAVEKRKKHE------ESLE-LKGKAEKRIKEEV-KSVKQEAT 120
           DFL K   E +I   VR A EK KK E      ES++ ++ KAEK I + V K V++E+ 
Sbjct: 61  DFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESV 120

Query: 121 PVKAVASPPEEKVAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
                AS  E    EK +E  EE+K+E+GP VPNKGNG D++NYSW Q+LQEV VN+PVP
Sbjct: 121 KPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQ 240
            GTK+R VVCEIKKNRLKVGLKGQ P++DGEL  +VKPDDCYW+IED+ +ISILLTK +Q
Sbjct: 181 TGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKSDQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+E+QKQ
Sbjct: 241 MEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 314
           EILKKFMSEHPEMDFS AK +
Sbjct: 301 EILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of PI0025478 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.6e-84
Identity = 164/292 (56.16%), Postives = 219/292 (75.00%), Query Frame = 0


Query: 26  SSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    A+PS   F A+FDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHEESLELKGKAEKRIKEEVKSVKQEATPVKAVASPPEEKV--AEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++     +  P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 PRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
           P VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 GELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 265
           GE  ++VKPDDC+W+IED+ +IS+LLTK +QMEWWKY VKG+PEIDTQKVEPE SKL DL
Sbjct: 185 GEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDL 244

Query: 266 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 314
           DPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 DPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of PI0025478 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-12
Identity = 48/189 (25.40%), Postives = 83/189 (43.92%), Query Frame = 0


Query: 125 VAEKLEENTEEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEI 184
           +AEKL          NG +V           + W Q+L+EVN+ + +P     +   C+I
Sbjct: 1   MAEKLAPEKRHDFIHNGQKV-----------FEWDQTLEEVNMYITLPPNVHPKSFHCKI 60

Query: 185 KKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKYLVKGDP 244
           +   ++VG+KG PP ++ +L   VK D  +W++ED+ I+ I L K  + + W   + G  
Sbjct: 61  QSKHIEVGIKGNPPYLNHDLSAPVKTDCSFWTLEDD-IMHITLQKREKGQTWASPILGQG 120

Query: 245 EIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPE 304
           ++D    + E                                   QK+ +L++F  E+P 
Sbjct: 121 QLDPYATDLE-----------------------------------QKRLMLQRFQEENPG 142

Query: 305 MDFSRAKIS 314
            DFS+A+ S
Sbjct: 181 FDFSQAQFS 142

[Close]

BLAST of PI0025478 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-06
Identity = 37/97 (38.14%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 36  FNANFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHEESLELKGK 95
           F+A+F+PSNPLGFLE V DF+  E++FL KD  EK+I   V  A E+ ++ E+  E    
Sbjct: 11  FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKERLRETEKKTE---- 70

Query: 96  AEKRIKEEVKSVKQEATPVKAVASPPE-----EKVAE 128
                  +V+ V+    P  A   P +     EKV E
Sbjct: 71  -----SMDVEKVRPSTLPFNASFDPSDPLGFLEKVFE 98

The following BLAST results are available for this feature:

BLAST of PI0025478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV09	3.1e-93	61.99	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]
Q9STN7	2.2e-83	56.16	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q5ZIN1	2.2e-54	46.58	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1	[more]
O35685	3.1e-53	46.90	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1	[more]
Q63525	2.7e-52	42.95	Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1	[more]

BLAST of PI0025478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGM4	8.6e-163	97.44	Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G004...	[more]
A0A1S3AUE5	8.6e-163	97.44	protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1	[more]
A0A0A0KQ62	1.4e-160	96.19	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=...	[more]
A0A6J1K9G4	1.5e-146	87.81	protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1	[more]
A0A6J1E8R0	1.2e-145	88.33	protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430428 PE=4 SV=1	[more]

BLAST of PI0025478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437594.1	1.8e-162	97.44	PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucum...	[more]
XP_011654620.1	2.8e-160	96.19	protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [...	[more]
XP_038874468.1	2.3e-154	93.95	protein BOBBER 1 [Benincasa hispida]	[more]
KAG7035749.1	1.8e-146	87.85	Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995953.1	3.0e-146	87.81	protein BOBBER 1-like [Cucurbita maxima]	[more]

BLAST of PI0025478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53400.1	2.2e-94	61.99	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	1.6e-84	56.16	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	6.1e-12	25.40	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	3.9e-06	38.14	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 155..229 e-value: 1.3E-20 score: 74.2
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 151..240 score: 17.312815
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 147..274 e-value: 8.5E-47 score: 160.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 141..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 24..313
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 156..240 e-value: 1.15236E-38 score: 129.59
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 24..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025478.1	PI0025478.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0051082	unfolded protein binding