PI0025463 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCCCTATGTCCTTTTATATGTATTTAGAGATTGTGGGTATCTTAGACAGGTAAGATTTGGATGATTTTGAGGGATGAGTTGACATCAAGAATTGCCCTTTTCAACCAAACCAATCAATAAAGCTTTATATATATAATTCCGGCCTCTTCATCTTTATTCCTTATCTTCAGTAATGGATCAAAATCATAATACCTCAAGTAGAGTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGAGGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACTCAACGAAAGGGCTGATAACTGCGGAGAGTTTACGGCAAAATTCGGCGCTATTGGGAACGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAAATGGAATTTTGTATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAGTAATTATATATATATATTTGTGTTTGTAATTTTATATTTGAATTGTAATAAACTCAAAAAACAGTGCAGTTGTTGATTAATGGTTTAATTATATGAGAGAAAGATCAAATTAAGAACTGCTTGTAGTTTAATTTGTATTATTATATAGTAAGAAAAATATTTAGGTTCATCTTAAACTTATTATTGTTATTGTTGTATATACTCAATCCTTTAATTATGGTTTGGCACGTAATAAACTTTTTTTTTTTTTGTTTTTTA GTTCCCCTATGTCCTTTTATATGTATTTAGAGATTGTGGGTATCTTAGACAGGTAAGATTTGGATGATTTTGAGGGATGAGTTGACATCAAGAATTGCCCTTTTCAACCAAACCAATCAATAAAGCTTTATATATATAATTCCGGCCTCTTCATCTTTATTCCTTATCTTCAGTAATGGATCAAAATCATAATACCTCAAGTAGAGTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGAGGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACTCAACGAAAGGGCTGATAACTGCGGAGAGTTTACGGCAAAATTCGGCGCTATTGGGAACGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAAATGGAATTTTGTATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAGTAATTATATATATATATTTGTGTTTGTAATTTTATATTTGAATTGTAATAAACTCAAAAAACAGTGCAGTTGTTGATTAATGGTTTAATTATATGAGAGAAAGATCAAATTAAGAACTGCTTGTAGTTTAATTTGTATTATTATATAGTAAGAAAAATATTTAGGTTCATCTTAAACTTATTATTGTTATTGTTGTATATACTCAATCCTTTAATTATGGTTTGGCACGTAATAAACTTTTTTTTTTTTTGTTTTTTA ATGGATCAAAATCATAATACCTCAAGTAGAGTGGATGAAGGGTATGAAGACTTGTTGCCGGTGATGGCGCAGAAGCTCGAGGTTGAGGTGTTTGTGGCCGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACTCAACGAAAGGGCTGATAACTGCGGAGAGTTTACGGCAAAATTCGGCGCTATTGGGAACGGAAGGGATGAACGAGAACGAAGCGGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTTAATGAAATGGAATTTTGTATTTTAATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAAAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAG MDQNHNTSSRVDEGYEDLLPVMAQKLEVEVFVAELCSGFRLLADSTKGLITAESLRQNSALLGTEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELSKSSC Homology
BLAST of PI0025463 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 157.1 bits (396), Expect = 1.2e-37 Identity = 74/113 (65.49%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21 Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06 Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy Swiss-Prot
Match: Q12798 (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06 Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy TrEMBL
Match: A0A5A7TCH3 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00290 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58 Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy TrEMBL
Match: A0A0A0KAP2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.6e-57 Identity = 118/125 (94.40%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy TrEMBL
Match: A0A6J1H361 (calcium-binding protein KIC OS=Cucurbita moschata OX=3662 GN=LOC111459966 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy TrEMBL
Match: A0A6J1KWH6 (calcium-binding protein KIC OS=Cucurbita maxima OX=3661 GN=LOC111499333 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51 Identity = 107/124 (86.29%), Postives = 116/124 (93.55%), Query Frame = 0
BLAST of PI0025463 vs. ExPASy TrEMBL
Match: A0A6P6B0W4 (calcium-binding protein KIC-like OS=Durio zibethinus OX=66656 GN=LOC111313969 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43 Identity = 94/120 (78.33%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of PI0025463 vs. NCBI nr
Match: KAA0039766.1 (Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58 Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of PI0025463 vs. NCBI nr
Match: XP_004140505.1 (calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein Csa_005589 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 2.0e-56 Identity = 118/125 (94.40%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of PI0025463 vs. NCBI nr
Match: XP_038875235.1 (calcium-binding protein KIC [Benincasa hispida]) HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52 Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of PI0025463 vs. NCBI nr
Match: XP_022958806.1 (calcium-binding protein KIC [Cucurbita moschata]) HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0
BLAST of PI0025463 vs. NCBI nr
Match: XP_023547367.1 (calcium-binding protein KIC [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51 Identity = 108/124 (87.10%), Postives = 116/124 (93.55%), Query Frame = 0
BLAST of PI0025463 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 157.1 bits (396), Expect = 8.9e-39 Identity = 74/113 (65.49%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0025463 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22 Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of PI0025463 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 ) HSP 1 Score: 100.9 bits (250), Expect = 7.5e-22 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of PI0025463 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of PI0025463 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|