PI0025365 (gene) Melon (PI 482460) v1

Overview


Name	PI0025365
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr11: 8657486 .. 8658359 (+)
RNA-Seq Expression	PI0025365
Synteny	PI0025365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGAGTCAATGGAGGGGCGAGCTTGCCGAAAAAAATGTTCAATGACTGGGAGTTGCGTAATCAGTAACACCCAACCTTCAAGTCCCCTAAGTTGTAACTGTACACTAGTTGACGTATTGTGTGTATTTCCGTGCGATGACAATTAAATATATGTATTAACACAGTGATTATTGACGCAATGCAGAATTCGCACATGGTTTTGTTTGTTACATTAATTTATTCTTATTTTCTTTTTCTAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAAGATGCCACCCTCGTTGAATGTCTGGTAGAATTGGTATCAACCGGCGGGTGGAGGTCGGATAATGAGACGTTTAGACCCGGTTACCATAGTCATCTAGAGAAAATGATGGGGGAAAGGATGCCGGGACATAATGTAACGGCTTCAACCATAGATTGTCAAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGTCGAGAAAGACTTGTACAACAATTGGGTGAAGATATGTTCTTGATTCTGCCCATTGTTGTTCGTTTCTAATAGTAAATTGACTAATTAGTTCCTGCAACACTTGTACAGAGTCATCCAGTCGCGAAGGGCCTCCTAAACAAACCTTTTCTCCATTACGACGATCTTTGCTACGTCTTTGGAAGAGATCCTGCAATAGGAGGTCGCACTGAAACCTTTGTCGGTGTTGGGTCGAACGTGCCAGTAGGATACGATGGATTTTCAGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACACAGGGACTGGACATGTCACCTGA

mRNA sequence

ATGCATGGAGTCAATGGAGGGGCGAGCTTGCCGAAAAAAATGTTCAATGACTGGGAGTTGCGTAATCATATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAAGATGCCACCCTCGTTGAATGTCTGGTAGAATTGGTATCAACCGGCGGGTGGAGGTCGGATAATGAGACGTTTAGACCCGGTTACCATAGTCATCTAGAGAAAATGATGGGGGAAAGGATGCCGGGACATAATGTAACGGCTTCAACCATAGATTGTCAAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGTCGAGAAAGACTTGTACAACAATTGGAGTCATCCAGTCGCGAAGGGCCTCCTAAACAAACCTTTTCTCCATTACGACGATCTTTGCTACGTCTTTGGAAGAGATCCTGCAATAGGAGGTCGCACTGAAACCTTTGTCGGTGTTGGGTCGAACGTGCCAGTAGGATACGATGGATTTTCAGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACACAGGGACTGGACATGTCACCTGA

Coding sequence (CDS)

ATGCATGGAGTCAATGGAGGGGCGAGCTTGCCGAAAAAAATGTTCAATGACTGGGAGTTGCGTAATCATATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAAGATGCCACCCTCGTTGAATGTCTGGTAGAATTGGTATCAACCGGCGGGTGGAGGTCGGATAATGAGACGTTTAGACCCGGTTACCATAGTCATCTAGAGAAAATGATGGGGGAAAGGATGCCGGGACATAATGTAACGGCTTCAACCATAGATTGTCAAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGTCGAGAAAGACTTGTACAACAATTGGAGTCATCCAGTCGCGAAGGGCCTCCTAAACAAACCTTTTCTCCATTACGACGATCTTTGCTACGTCTTTGGAAGAGATCCTGCAATAGGAGGTCGCACTGAAACCTTTGTCGGTGTTGGGTCGAACGTGCCAGTAGGATACGATGGATTTTCAGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACACAGGGACTGGACATGTCACCTGA

Protein sequence

MHGVNGGASLPKKMFNDWELRNHMTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHNVTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLNKPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYTGTGHVT

Homology

[Close]

BLAST of PI0025365 vs. ExPASy TrEMBL
Match: A0A5A7U216 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001370 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.9e-66
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+  LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEVGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCII EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIIAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+DPA GGR E+F  +GSN P GYD F+A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDPATGGRAESFTDIGSNDPAGYDAFAADAVPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.2e-65
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. ExPASy TrEMBL
Match: A0A5A7U9V6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004400 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.2e-65
Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECL+ELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLMELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D AIGGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KEFVHYDELSYVFGKDRAIGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAEAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. ExPASy TrEMBL
Match: A0A5D3CBF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00350 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. NCBI nr
Match: KAA0047509.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 5.9e-66
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+  LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEVGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCII EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIIAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+DPA GGR E+F  +GSN P GYD F+A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDPATGGRAESFTDIGSNDPAGYDAFAADAVPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. NCBI nr
Match: KAA0051960.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECL+ELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLMELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D AIGGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KEFVHYDELSYVFGKDRAIGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. NCBI nr
Match: KAA0048377.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 3.2e-64
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 3.2e-64
Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 24  MTTSSRAPKHHWTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHN 83
           MT+SSR PKH WTKEE+A LVECLVELV+ GGWRSDN TFRPGY + L +MM  ++PG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 84  VTASTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNWSHPVAKGLLN 143
           + ASTID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+++++WSHP AKGLLN
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLLN 120

Query: 144 KPFLHYDDLCYVFGRDPAIGGRTETFVGVGSNVPVGYDGFSAYDGNDMEFPTMYT 199
           K F+HYD+L YVFG+D A GGR E+F  +GSN P GYD  +A    D +FP MY+
Sbjct: 121 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 175

[Close]

BLAST of PI0025365 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 32/134 (23.88%), Postives = 60/134 (44.78%), Query Frame = 0


Query: 35  WTKEEDATLVECLVELVSTGGWRSDNETFRPGYHSHLEKMMGERMPGHNVTASTIDCQIK 94
           WT   D  L++ LVE V+ G      +TF     + +      +  G       +  + K
Sbjct: 327 WTPPMDYHLIDLLVEQVNNG--NRVGQTFITSAWNEMVTAFNAKF-GSQHNKDVLKNRYK 386

Query: 95  TMKRAFQAISEMRGPSCSGFGWNDELKCIIVEKDLYNNW--SHPVAKGLLNKPFLHYDDL 154
            ++R +  I  +     +GF W+     +I + D++N +  +HP A+    K    Y +L
Sbjct: 387 HLRRLYNDIKFLL--EQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNL 446

Query: 155 CYVFGRDPAIGGRT 167
           C++FG++ + G  T
Sbjct: 447 CFIFGKETSDGRYT 455

The following BLAST results are available for this feature:

BLAST of PI0025365 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U216	2.9e-66	65.71	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DPR5	9.2e-65	64.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U9V6	9.2e-65	64.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	1.6e-64	64.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CBF7	1.6e-64	64.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0025365 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047509.1	5.9e-66	65.71	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051960.1	1.9e-64	64.57	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035621.1	1.9e-64	64.57	retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon...	[more]
KAA0048377.1	3.2e-64	64.57	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038122.1	3.2e-64	64.57	retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon...	[more]

BLAST of PI0025365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	3.0e-07	23.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 34..129 e-value: 1.6E-7 score: 32.2
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 25..169
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 25..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025365.1	PI0025365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding