PI0025283 (gene) Melon (PI 482460) v1

Overview
NamePI0025283
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 19971156 .. 19971410 (-)
RNA-Seq ExpressionPI0025283
SyntenyPI0025283
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGCTCGATCAATTGCCAGTCAAGCAATCCTTATCTTCACGCGGCGGAGCAAAGCTACGGATTATTCATTCCTATGGTGAAACTCATAATGTGGGTCCTTCTCTTCTCTCTAATCGATTCCACCCAGTTCCTCTGTTTTCACTCTTTTCCCTCTTCTCTTCTCTATCCGCCGACGGTTCCCAAAACCCAACTCGTTAACTTTTTCTTACATTTTGAACAAACCCATCTACACAAATTAACCCACCATTAA

mRNA sequence

ATGTACTGCTCGATCAATTGCCAGTCAAGCAATCCTTATCTTCACGCGGCGGAGCAAAGCTACGGATTATTCATTCCTATGGTGAAACTCATAATGTGGGTCCTTCTCTTCTCTCTAATCGATTCCACCCAGTTCCTCTGTTTTCACTCTTTTCCCTCTTCTCTTCTCTATCCGCCGACGGTTCCCAAAACCCAACTCGTTAACTTTTTCTTACATTTTGAACAAACCCATCTACACAAATTAACCCACCATTAA

Coding sequence (CDS)

ATGTACTGCTCGATCAATTGCCAGTCAAGCAATCCTTATCTTCACGCGGCGGAGCAAAGCTACGGATTATTCATTCCTATGGTGAAACTCATAATGTGGGTCCTTCTCTTCTCTCTAATCGATTCCACCCAGTTCCTCTGTTTTCACTCTTTTCCCTCTTCTCTTCTCTATCCGCCGACGGTTCCCAAAACCCAACTCGTTAACTTTTTCTTACATTTTGAACAAACCCATCTACACAAATTAACCCACCATTAA

Protein sequence

MYCSINCQSSNPYLHAAEQSYGLFIPMVKLIMWVLLFSLIDSTQFLCFHSFPSSLLYPPTVPKTQLVNFFLHFEQTHLHKLTHH
Homology
[Close]
BLAST of PI0025283 vs. ExPASy TrEMBL
Match: A0A0A0KUA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G637690 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 1  MYCSINCQSSNPYLHAAEQSYGLFIPMVKLIMWVLLFSLIDSTQF-LCFHSFPSSLLYPP 60
          MYCSINCQSSNPYLHAAEQSYGLFIPM KLIMWVLLFSLIDST F LCFHSFPSSLLYPP
Sbjct: 1  MYCSINCQSSNPYLHAAEQSYGLFIPMPKLIMWVLLFSLIDSTHFLLCFHSFPSSLLYPP 60

Query: 61 TVPKTQLVNFFLHFEQTHLHKLTHH 85
          T+PKTQL++FFLHFEQTHLHKLTHH
Sbjct: 61 TIPKTQLLDFFLHFEQTHLHKLTHH 85

[Close]
BLAST of PI0025283 vs. NCBI nr
Match: KGN52479.1 (hypothetical protein Csa_007971 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 1  MYCSINCQSSNPYLHAAEQSYGLFIPMVKLIMWVLLFSLIDSTQF-LCFHSFPSSLLYPP 60
          MYCSINCQSSNPYLHAAEQSYGLFIPM KLIMWVLLFSLIDST F LCFHSFPSSLLYPP
Sbjct: 1  MYCSINCQSSNPYLHAAEQSYGLFIPMPKLIMWVLLFSLIDSTHFLLCFHSFPSSLLYPP 60

Query: 61 TVPKTQLVNFFLHFEQTHLHKLTHH 85
          T+PKTQL++FFLHFEQTHLHKLTHH
Sbjct: 61 TIPKTQLLDFFLHFEQTHLHKLTHH 85

The following BLAST results are available for this feature:
BLAST of PI0025283 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025283 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUA31.1e-3792.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G637690 PE=4 SV=1[more]
BLAST of PI0025283 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52479.12.4e-3792.94hypothetical protein Csa_007971 [Cucumis sativus][more]
BLAST of PI0025283 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025283.1PI0025283.1mRNA