PI0025223 (gene) Melon (PI 482460) v1

Overview


Name	PI0025223
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	myb family transcription factor PHL5-like isoform X1
Location	chr04: 10821738 .. 10824728 (+)
RNA-Seq Expression	PI0025223
Synteny	PI0025223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACAATAAGAAAGAAGAAAAAAAATTAGAAATAGTACTTCATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAAAAGCCTCAAACGTTCCTACATATAACATTTTAATTTGTTGCTTCTATTCATTCCTTCCTTCATATAATTATGCTATGAAGTTGATGATGAATGAGTACAATGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATGTCAAACTTTTTCAGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCATCAGCATCACTTTCATATCTCATCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAGCTGTTCCCAAGAGTTTGATGGTGAGTACTGTTCTTGGTCATGTGAGGAGTTGATGCCAAATCACAACAAAAAGGTCAGTCTATAAAAGTACTTAGCTTGTTCTTGATAAAGCTGATCTTTTCTTCCTTCAGTTTAACTACTACTTACTTTTGTTCCTGTACTTCAAGCTTCGGTGATTTAGTCTATGTAAGAGAGACATAAACGTACTCTTAGTTTTAACTCATTTTAATTTCTATACTTCCAAGTACGTTTGAAAAGTGACCACATTTTGCGCCCTACTTTGCAACAATTAGGGGAAAATAAGATGGAAATAAAAATAAAATGGTCATTTTTCAAAATTACATAGACCGATAAAACCAACTAAAGTATTATTTAATTTTATTTTTTTTTGTTCTTCTTCTCGTGCAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACAGAAGAACTTCACCAAAAGTTCATGAATTGCATCGATCAGCTCGGAGGAGCACAAAGTAAGTAACGTATATTGTAAACAATCAAGATATTATGGCCATCTGAGAATTAGTAACTCGGTATTTGTTGCAAAAGTGCAGAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACTAAAGGATTGACTCTCATCCATATAAAAAGCCATTTACAGGTACAACATTTCACTCTCAGTTTGTCATTCTTTTGATTTGGTTTTTGATCAAATTTTTTTTTTCATTTTCAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGTGTATGTTCATGTTATAATCCTAAACTCTATCAAACTAGAAATGTAAACTTAACTAAAACTCTCAACAAAACCAAACAAATAGTGATGTGTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAAAGAACTGATGCAGGGTAACCAAAACATGTAAGTTTGTGTATTTGGTTTGCATTTACATTAACCACCATAAGAAAATGTTACAAACTTTGATTATCTTCCAAGCAGAGGGAAGCAGCTGATGGAAGCAGTGAAACAACAACTTGATGCTCAGAGTAGTTTGAATGAACAATTGGAGGTTTGATAATCCCATCATAGAACTTATTGATTGTAATGCTCTTTTTTCGGTTAATTGTGTTGTCTTCCTAAATTCTTTAAAAAGAAAAAGAAAATTGAGGGGATCGTTTTTATCTCTATAAGGGGACATTTGAGGCGAAAAGTGGAGTTGTGAACCCAAAGAGTGTTATGAAATCTTAGAAAGTTATGAATACTAAGACCTACAGAAGAAAGAGTTGTCAAGATATAAACTTGATATTACTTAGTCATGAGACTCATAAACTCTACCCGGACAAGAAGTGGAGTTTACAAACTCTTTGACCGACTTCTTGGGCCAAACACCTCCTAAATAGTTAAGTGAGTAAATTTTAACATCACAGTGTATTTAAACCACAAGTTTAGTAATTGTCATTTAGGGATGTCTTGGTTTGTTAGGGGTTTAGATTAGATTGTGTGAAGAAATGAGCAAGTTTTGGAAGCCAAGATTTATGTTTAGCTTATGTCCTGTGGTTTATAGGTTTAAAATTCATAAAAGGTTGCTACATAATCTAAGAGGTAGGTTCACATGTTAGAGTTTACAAAACGTAGGTTTCATGTTATTTATAATTAGGAGTGATCAAGATCGATGTATCCTGACCATGCAAGTATTTTTAGAAGACAAATCCTACCATAAGTAGCTATGGGGGAAACTATTTAGATATTAAATCCTATATATATGGCCATTATAGTTTGAGAACTAATTTTACTTGGTAGGTTTTATGTAGTAATTGAAACTAACAAATTTGTGAACTAGAATTACATTTTGTAAAACTCGAAGCAACATAAAGTATAATAGTCTTCAGGAGCTTACGTGCAATTGGTGTGTGTGTGTGTATAAACATAAGGGTTTACATTTAGGTTAAATAAATTTGATTATTTTAGTTTAAAAAAACCCCAATTATTACTATTTTTAAAAATAATGAAAAAAACCACAAGGACCAACAAAGCCTTGTGGCTTCACAAAAGGTGCACGCAACATTCCTAATTCATGCCCTATTCTGTGAGTCTCGCCTTTTTAAGGTGAGCCAAAGGCGAGCCAGAGGACTTCTTAAAATATTGCGTAGGATAACTGAACTCGTACATCCAAAGACATTTGAAAGTTCTAATTTCATCTGATTTGTCCTTTGGACATAAAAATAATATTGAGGTTTAAGATATACTGCCGTTGATTGTTGCTTTTTGGGTACAGGTTCAGAAGAAATTGATCTCAACCATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTATTTAGAAAAGACTAAGAGAGAATAAAATGGACTTTGCTTGGATCAGAAAAGTGTGTTCTTTTCCTGGCAATATCTCTCCAACCTGATTTTGCATCTCACACAAATCTTAAGCAGAATCTATTTATATATCTATCCTTCCATTTTGCATCTTAAACAAAAATAAGTCACATTTAAACACCAAAATAAAAAGGGTATAACAGAGATTCAAACAGAAATTCATGAGATATGATATGATCACACAGAGATGGT

mRNA sequence

GAAACAATAAGAAAGAAGAAAAAAAATTAGAAATAGTACTTCATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAAAAGCCTCAAACGTTCCTACATATAACATTTTAATTTGTTGCTTCTATTCATTCCTTCCTTCATATAATTATGCTATGAAGTTGATGATGAATGAGTACAATGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATGTCAAACTTTTTCAGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCATCAGCATCACTTTCATATCTCATCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAGCTGTTCCCAAGAGTTTGATGGTGAGTACTGTTCTTGGTCATGTGAGGAGTTGATGCCAAATCACAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACAGAAGAACTTCACCAAAAGTTCATGAATTGCATCGATCAGCTCGGAGGAGCACAAAGTAAGTAACGTATATTGTAAACAATCAAGATATTATGGCCATCTGAGAATTAGTAACTCGGTATTTGTTGCAAAAGTGCAGAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACTAAAGGATTGACTCTCATCCATATAAAAAGCCATTTACAGGTACAACATTTCACTCTCAGTTTGTCATTCTTTTGATTTGGTTTTTGATCAAATTTTTTTTTTCATTTTCAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGTGTATGTTCATGTTATAATCCTAAACTCTATCAAACTAGAAATGTAAACTTAACTAAAACTCTCAACAAAACCAAACAAATAGTGATGTGTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAAAGAACTGATGCAGGGTAACCAAAACATGTAAGTTTGTGTATTTGGTTTGCATTTACATTAACCACCATAAGAAAATGTTACAAACTTTGATTATCTTCCAAGCAGAGGGAAGCAGCTGATGGAAGCAGTGAAACAACAACTTGATGCTCAGAGTAGTTTGAATGAACAATTGGAGGTTTGATAATCCCATCATAGAACTTATTGATTGTAATGCTCTTTTTTCGGTTAATTGTGTTGTCTTCCTAAATTCTTTAAAAAGAAAAAGAAAATTGAGGGGATCGTTTTTATCTCTATAAGGGGACATTTGAGGCGAAAAGTGGAGTTGTGAACCCAAAGAGTGTTATGAAATCTTAGAAAGTTATGAATACTAAGACCTACAGAAGAAAGAGTTGTCAAGATATAAACTTGATATTACTTAGTCATGAGACTCATAAACTCTACCCGGACAAGAAGTGGAGTTTACAAACTCTTTGACCGACTTCTTGGGCCAAACACCTCCTAAATAGTTAAGTGAGTAAATTTTAACATCACAGTGTATTTAAACCACAAGTTTAGTAATTGTCATTTAGGGATGTCTTGGTTTGTTAGGGGTTTAGATTAGATTGTGTGAAGAAATGAGCAAGTTTTGGAAGCCAAGATTTATGTTTAGCTTATGTCCTGTGGTTTATAGGTTTAAAATTCATAAAAGGTTGCTACATAATCTAAGAGGTAGGTTCACATGTTAGAGTTTACAAAACGTAGGTTTCATGTTATTTATAATTAGGAGTGATCAAGATCGATGTATCCTGACCATGCAAGTATTTTTAGAAGACAAATCCTACCATAAGTAGCTATGGGGGAAACTATTTAGATATTAAATCCTATATATATGGCCATTATAGTTTGAGAACTAATTTTACTTGGTAGGTTTTATGTAGTAATTGAAACTAACAAATTTGTGAACTAGAATTACATTTTGTAAAACTCGAAGCAACATAAAGTATAATAGTCTTCAGGAGCTTACGTGCAATTGGTGTGTGTGTGTGTATAAACATAAGGGTTTACATTTAGGTTAAATAAATTTGATTATTTTAGTTTAAAAAAACCCCAATTATTACTATTTTTAAAAATAATGAAAAAAACCACAAGGACCAACAAAGCCTTGTGGCTTCACAAAAGGTGCACGCAACATTCCTAATTCATGCCCTATTCTGTGAGTCTCGCCTTTTTAAGGTGAGCCAAAGGCGAGCCAGAGGACTTCTTAAAATATTGCGTAGGATAACTGAACTCGTACATCCAAAGACATTTGAAAGTTCTAATTTCATCTGATTTGTCCTTTGGACATAAAAATAATATTGAGGTTTAAGATATACTGCCGTTGATTGTTGCTTTTTGGGTACAGGTTCAGAAGAAATTGATCTCAACCATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTATTTAGAAAAGACTAAGAGAGAATAAAATGGACTTTGCTTGGATCAGAAAAGTGTGTTCTTTTCCTGGCAATATCTCTCCAACCTGATTTTGCATCTCACACAAATCTTAAGCAGAATCTATTTATATATCTATCCTTCCATTTTGCATCTTAAACAAAAATAAGTCACATTTAAACACCAAAATAAAAAGGGTATAACAGAGATTCAAACAGAAATTCATGAGATATGATATGATCACACAGAGATGGT

Coding sequence (CDS)

ATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAAAAGCCTCAAACGTTCCTACATATAACATTTTAATTTGTTGCTTCTATTCATTCCTTCCTTCATATAATTATGCTATGAAGTTGATGATGAATGAGTACAATGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATGTCAAACTTTTTCAGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCATCAGCATCACTTTCATATCTCATCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAGCTGTTCCCAAGAGTTTGATGGTGAGTACTGTTCTTGGTCATGTGAGGAGTTGATGCCAAATCACAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACAGAAGAACTTCACCAAAAGTTCATGAATTGCATCGATCAGCTCGGAGGAGCACAAAGTAAGTAA

Protein sequence

MTTLCPYHYKKVDQKASNVPTYNILICCFYSFLPSYNYAMKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQSK

Homology

[Close]

BLAST of PI0025223 vs. ExPASy TrEMBL
Match: A0A5A7U415 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00100 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFH 99
           MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           SPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS+VSKTRIKWTE+LHQKF+NC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. ExPASy TrEMBL
Match: A0A5D3CJQ9 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00080 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFH 99
           MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           SPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS+VSKTRIKWTE+LHQKF+NC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. ExPASy TrEMBL
Match: A0A0A0LEY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702590 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.6e-60
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHS 99
           MKLMMNEY EFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHS
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 60

Query: 100 PNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           PNPQEAQHQS+CSQEFDGE CSWSCEELMP N NKKLKSSIVSKTRIKWTEELHQ+F NC
Sbjct: 61  PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. ExPASy TrEMBL
Match: A0A6J1F3G0 (myb family transcription factor PHL5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441832 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 87/128 (67.97%), Postives = 95/128 (74.22%), Query Frame = 0


Query: 41  KLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHS 100
           +L+M++ N  C LSYL SP  DFYVFEGC+TFSE ESSF SSNT D Q H H SS +F S
Sbjct: 4   QLLMSDCNGLCQLSYLGSPLLDFYVFEGCETFSEAESSFVSSNTEDDQPHLHFSSFAFDS 63

Query: 101 PNPQ-EAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 160
              Q EAQ QSSC  EF G+ CSWS EELM N NKK KS I SK RIKWTEELHQKFMNC
Sbjct: 64  SKHQGEAQEQSSCCHEFSGD-CSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFMNC 123

Query: 161 IDQLGGAQ 167
           +DQLGG Q
Sbjct: 124 VDQLGGTQ 130

[Close]

BLAST of PI0025223 vs. ExPASy TrEMBL
Match: A0A6J1J569 (myb family transcription factor PHL5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481412 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 6.5e-32
Identity = 82/116 (70.69%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 53  LSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHSPNPQ-EAQHQSS 112
           LSYL SP  DFYVFEGC+TFSE ESSF SSNT D QHH   SS +F S   Q EAQ QSS
Sbjct: 20  LSYLGSPLLDFYVFEGCETFSEAESSFVSSNTEDDQHHLPFSSFTFDSSKHQGEAQEQSS 79

Query: 113 CSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQ 167
           C QE +G+ CSWS EELM N NKK KS I  K RIKWTEELHQKFMNC+DQLGG Q
Sbjct: 80  CCQELNGD-CSWSWEELMGNENKKSKSRIGWKKRIKWTEELHQKFMNCVDQLGGTQ 134

[Close]

BLAST of PI0025223 vs. NCBI nr
Match: XP_011652834.2 (myb family transcription factor PHL5 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 4.8e-82
Identity = 151/167 (90.42%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MTTLCPYHYKKVDQKASNVPTYNILICCFYSFLPSYNYAMKLMMNEYNEFCPLSYLDSPF 60
           MTTLCPYHYKKVDQ ASN PTYNILICCFY  LPSY+YAMKLMMNEY EFCPLSYLDSPF
Sbjct: 1   MTTLCPYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEYKEFCPLSYLDSPF 60

Query: 61  HDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYC 120
           HDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHSPNPQEAQHQS+CSQEFDGE C
Sbjct: 61  HDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENC 120

Query: 121 SWSCEELMP-NHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQ 167
           SWSCEELMP N NKKLKSSIVSKTRIKWTEELHQ+F NC+DQLGGAQ
Sbjct: 121 SWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQ 167

[Close]

BLAST of PI0025223 vs. NCBI nr
Match: TYK10646.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFH 99
           MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           SPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS+VSKTRIKWTE+LHQKF+NC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. NCBI nr
Match: KAA0048301.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFH 99
           MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           SPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS+VSKTRIKWTE+LHQKF+NC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. NCBI nr
Match: KAE8650941.1 (hypothetical protein Csa_001106 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-59
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHS 99
           MKLMMNEY EFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHS
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 60

Query: 100 PNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           PNPQEAQHQS+CSQEFDGE CSWSCEELMP N NKKLKSSIVSKTRIKWTEELHQ+F NC
Sbjct: 61  PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 128

[Close]

BLAST of PI0025223 vs. NCBI nr
Match: XP_038904770.1 (myb family transcription factor PHL5-like isoform X2 [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 5.2e-44
Identity = 99/128 (77.34%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 40  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFH 99
           M LMMN+ N F PLSYLDSPFHDFYVFEG QTF E ESSFASSNTND  HHFHI SSSFH
Sbjct: 1   MNLMMNDNNGFYPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTND--HHFHISSSSFH 60

Query: 100 SPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNC 159
           S NPQE QHQSS SQE +G++CS SCEELM   NKK KS IVSKTRIKW++ELHQKF++C
Sbjct: 61  SLNPQEDQHQSSYSQESNGDHCSLSCEELMQCDNKKSKSRIVSKTRIKWSKELHQKFIDC 120

Query: 160 IDQLGGAQ 167
           +DQLGGAQ
Sbjct: 121 VDQLGGAQ 126

[Close]

BLAST of PI0025223 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 44.7 bits (104), Expect = 8.7e-05
Identity = 26/82 (31.71%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 84  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKT 143
           +N +  H + +SS H P     +  S  S    G   + +C               V+KT
Sbjct: 149 SNSNVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC---------------VNKT 208

Query: 144 RIKWTEELHQKFMNCIDQLGGA 166
           RI+WT++LH+KF+ C+++LGGA
Sbjct: 209 RIRWTQDLHEKFVECVNRLGGA 215

[Close]

BLAST of PI0025223 vs. TAIR 10
Match: AT5G06800.2 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 44.7 bits (104), Expect = 8.7e-05
Identity = 26/82 (31.71%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 84  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKT 143
           +N +  H + +SS H P     +  S  S    G   + +C               V+KT
Sbjct: 149 SNSNVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC---------------VNKT 208

Query: 144 RIKWTEELHQKFMNCIDQLGGA 166
           RI+WT++LH+KF+ C+++LGGA
Sbjct: 209 RIRWTQDLHEKFVECVNRLGGA 215

[Close]

BLAST of PI0025223 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 9.6e-04
Identity = 16/30 (53.33%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 137 SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ 167
           SS+ SK R++WT ELH+ F+  I+QLGG++
Sbjct: 233 SSMTSKQRMRWTPELHEAFVEAINQLGGSE 262

[Close]

BLAST of PI0025223 vs. TAIR 10
Match: AT3G04450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 9.6e-04
Identity = 16/30 (53.33%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 137 SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ 167
           SS+ SK R++WT ELH+ F+  I+QLGG++
Sbjct: 193 SSMTSKQRMRWTPELHEAFVEAINQLGGSE 222

The following BLAST results are available for this feature:

BLAST of PI0025223 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U415	1.3e-61	90.63	Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3CJQ9	1.3e-61	90.63	Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LEY1	5.6e-60	91.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702590 PE=4 SV=1	[more]
A0A6J1F3G0	1.3e-35	67.97	myb family transcription factor PHL5-like isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1J569	6.5e-32	70.69	myb family transcription factor PHL5-like isoform X2 OS=Cucurbita maxima OX=3661...	[more]

BLAST of PI0025223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652834.2	4.8e-82	90.42	myb family transcription factor PHL5 [Cucumis sativus]	[more]
TYK10646.1	2.8e-61	90.63	protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]	[more]
KAA0048301.1	2.8e-61	90.63	protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]	[more]
KAE8650941.1	1.2e-59	91.41	hypothetical protein Csa_001106 [Cucumis sativus]	[more]
XP_038904770.1	5.2e-44	77.34	myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]	[more]

BLAST of PI0025223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06800.1	8.7e-05	31.71	myb-like HTH transcriptional regulator family protein	[more]
AT5G06800.2	8.7e-05	31.71	myb-like HTH transcriptional regulator family protein	[more]
AT3G04450.1	9.6e-04	53.33	Homeodomain-like superfamily protein	[more]
AT3G04450.2	9.6e-04	53.33	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 141..168 e-value: 3.1E-6 score: 29.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025223.1	PI0025223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity