PI0025132 (gene) Melon (PI 482460) v1

Overview
NamePI0025132
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionGlycine-rich RNA-binding protein RZ1C
Locationchr10: 21481500 .. 21486999 (-)
RNA-Seq ExpressionPI0025132
SyntenyPI0025132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGTGTAGTTCCAAATTTATTTTCTAGGGTTTTTGAGGATCTTTAGTAACGAGACGAAGACTCATTCTATCAGAACATTTCACTCTAACCGCACAAATTAGGTATTTCCCTTTCTGCACTTTCACCATTTTCTTCAAATTCTCAGTATCAATTCTTCTTTACGGTACCAAATTTACTGGTTGCTTTTCTTTTTCGCCGATTTTCCTTTAAAATTTTGCTTCTATTTCTCTAATTACCTTGGTTTTTGCTGTGCAGGAGGATTTTTTCCCCCTGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGAGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATTGATTCTCAGGTTACCCTTATTTATATATATTCCTCGATTTGTAGTTTGATCTTTATTGAACACATTGAACTTTGTCTAAACTGAAAACATTGGAATAAGTTATTCATTTATATCTTCTAGGAGAAGGAAATAGAGGAAATTATAAAATGGGTGTCATTCGGTGCTAATGTTCATATGAAGAATATAATTTGTAAATTTACACCCCTTTTCCCTCTGATAGCATGTCAAAACACCGCAGATGAACTGCAAGGTTAACTTTTACCATCTGAAGCCATGATTTTTTTTTTCTTTTCTCAGTATTGTTTTATGATACCTTAAATTTTTTTTTTCTCCAACCTCCTCTTCCTGATGATGTTTCTTTTTCCTTGTGAATGAGGACGCTGTTAATGAACTTTTTGGGAAGCGGTTTCACTATCCATGTAAAGTTGAATGCATCAAGATGCTGAAGGTCATAGGGTTGTTTGTGCTTAAGTATAATTTGATTTAGATCTGCTGGTTAAGAAAAAGTGCTACCATCTGGATATTGGGAATATGGTTGCCTGCAAACTCAATCTTGTGCTCTAGCTGATTGGGGTTTGGTAGGATTTTATTACGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCTTGATTTAAACCAGAGGAACTATTAACAAGTGATGTGCTGATGCCTGCTCGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTTGATGAGGAATCTGAAGTCACTAAAATGTTTCAGGATCCAACTAATAAATGTTCTAGTATTTTCTTGGTGAAGTTTATCTTGCTTTGGATGATTATTAAACCCAACTTATCCTTGGATTACCCTTCTTACCAACGGTATGACCAAAAGTCAATGAAGAAGTTTATGTGGTTATACGAGATGTTGCGTGGGGCAGAAAGTCTGGGCTAGATTGCTAGATTGACTCAGATAATGAGTTTGCTAAGTCATCTAATCTCCGAAAGTTTTCAGAAGCCATATGTCATAGATGGAACGCTTTGTTGTTTGAAGTACTGGCTGCTTCTTTGTAATGATTTCTTCGTGTTCCTGTCTGCGACTAATTACTATCCAAGTGAGAGATAGCTGGTTTCTCATTTGCTAGTTTCACTGGTGTTGAGAGTTGTCAGTTTGATTTAAGATGAAGAAGAAAATGTAAGAGTGGTGCATGTTTTATGGCTAAGTTTTATGATAGCATGCAAAGGTACAGTTTTGGGAGATCAATAACCATTTCATTCTTTTGAGTGGACACTGCATCTTTGAATTTCATTTTTCTGTGATGAAGTTGCCAGAGTACCCTACATTTCCGAGCATGCTCAGAAAGTTATTTGTACTGGTTTCTGTTTAGCAGCTTATGTGCTAGAAACTGTACTAGTGATGCCAGGCTTAGCAGCTCAGACATTTTCTGAAGAATCGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGGTTTCCTCCTTGTACGATGTCAGCTGAATTTTAAATGTCCGCTTGAGGACCTTTTCTGATCAGTTGTTATCTTTGTTGGTGAGCTTGTTAAGTAATATGTGATGGACAGGACCCTGGACAATGATGTCGATATTTTTGCCATCCAAAGGTTCCAGAGTTCTTAGGCCCTCAGTTTTCTGTTATGTCCGAGCATTATGAATGTCTATTTGTTGGGTATAGTACTGCAGTCTGCAAGAGAGCAATTGGATCTGAAGCTAAATTTGAGTTCCTGTAGGTGCAGTGTTGCAGTTCCTATTTAGAGGAATGGGTTTAGGTTGTGGCAACGTGAAAAATTATGGAGGTGTAGTTTTTCATTCCTTTGTTTGCATCCTTTTCCTGTTGTTTGGAGTCGTTTCTCAAGATTTGCCAAGAATGCTGCTGTTCTGTTTTCCTTTTTTGTGGTCTTTGTCTTAGCAAAGTTTGAATTCATCGATTATTGAATCTATTTAAACTTAAGAGGGGTTGAATATGAATATGTGCCTAGTTAAGTATGGTTGCCATGCAAGAAGTTTTGTCGTCGTCAAATTTTCTAATACAGCCTCTTGTCCACGAATTCTGTGGTTGCCATGCAAGTTGTCGTCATGAAGTTTTCTAGTACAGCCTTTTGTGTCCACAAGCTGATGGCATCTCTATTGCAGAATAAGTTGGCATCTCAATTGCCTGAAATTTTGCTGTGTCTTCTTGCCTGTGTTTCCTAGACCATTCATCCTGGAAGATATGTTGTTTAAGGATTCATCTTTCTTTTTTGAGATTTATTCCACCATCTACTTCACATCACGTCCCAATATGATCGTTTGACAACAACATTGAGGTTAACAAATCCCTTAGTTGGAGTAATACACACATCAAATGAAGTGTTTGTAGTGGACCTTTTTTTAGTTAAGATTGACTTTGAGTACCATTTTTGGATGCTTGACTGCTCAGAAGAAGGCCATGTAGCCATGTAGCCATGTTTTTATGGCATGGTTTCTTTTGAATAAAAGGGGACTAGAGATCTAAGATACTCTCACTTCAGAAGATAGACCTAAAGACGTGCAGGTGCTTTTGTTTTGTTAAGGAATTATGTAACATGTTGCCATGAGTTCATAAACGGAAGAAAAAGTAAGTTGTCAGACTTTTTAAAACATTTTTATGGTGTTATTATCAGTTACTTTGAACGAGTTCTCTTTGATGTACTTTTTTTATCGTGTATACAGCATGTGATAGGCTGAACTTCATCACCAGTTTGTACCCATAACTTATTCTGTTATTCTGCTTCTCCAATGGAGTGTAGGTTTGTTAACCATGTGTCCTGAATGATAATTTGATGGAGTTTTAACCTCTATTTTTAGTAGTTGTTGGAGTTTGAAACCTCTAGATCATGGTAACTGTTTGGTATTGAATCTATATCTATACCTCTCGACTTTGTCACGATTGTACTTATGAGCTTCAAGCCCAAAATTGGGTATAGTTTTCCATGCTTTTAGATTAACCTTGTGACCACTCCGAACTTTTATGGGCCATGAGCTGGGATCTTAAATACCAAAACAAACCACCTTGTATTGGTGGTCGGGTCGTAGAGTTTATCTTGAAGCCTGTCATCTTTGAACATTGAGGAGGTGGGAACTCTGGGTTATTTATTTATCTCTAATTGTGGTGTATCTCTACATCCCTGTTTCTTTGATGCTGGTTTTTGTTACATTGGACAAATTTACTTTATAATCTAGGGTTAGACTATACTGATGGCTGGCAGGTTTCTAGTTTTCACTTAGTATACATTATTAGCATGGGATGTACTTTAGTATCTCTGTTCTAATGACTTGATTTAAGTTTTATTGGCTATTCAATTGATTTGCTCTTTGGCATTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGTCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCCAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGCGGGGATCGCTTTGCTGGAGATACTAATCGTTATGTGGATGATCGTTATGAAAGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGTAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACTGACTGATGTTTTCTGTGGATTTTTAGGGCATTATTTGTTTGTTTAAAGTAATTATCACTGGGAAATAGTAAATTTGCAGAATAGCGATCCAATATTATATTGTTCTTTTGTTGATTAATTGATGACTGCTCAATTGTTTCGTTGCAGCATCATATAGTTAACTAACCAATCTCATTCCTGATTTTTACATAAATCTGCAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGATACTATAGAGATGGTGTACCTCGTGGGGTTGATAAGTATGGAAGTGGCGGTCCTGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTATTGTTAACACATTATCAGATTTATCAAAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGGAGTACCGATGCCTGACTGAGACAGATTGTTGCGGTGTTGTGTAGTTTTCATGCATCTGAGTTTTTTTGTTCAGAGACACAGATAAATGCTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTCCTAAAATGTCGTGGTGAATCTCGAAGGGAGCAACGTAAGGTTGAGTCGAGGACTCTTAAGGCTTGTTTGATTCATAATTCATAAACAAATTAGTAGAGATACAACTAGAGAGGCCAGTGGCACCATATTCGTGTATTTAGCAGCACCTTTTACTGTTGAGAAAAGGGGAATAATAATAGAGGAAGTAAATATGAGAGACGAAGCTTGAAAATTGGCCTCCCAATGAAGCATCAAAGAACAAACTCCGCGGCTGTCAGGAAGAAATATGGTTCGGTTTGGGCCTCAATTGGAATTACTGACTTGCTTTTCTCCCTTTTTTCCTTCAATATCACAGGGTTATTATTGTTATTTTATTTAAATGTTTCTTCCAATCCATGTTACTGATTTTCTCTTTAACTTTAGGAAAATGAGAAAAGAAAAATGTGCATATTTTGAGTGCTCGACACTATATTTCTTCCACCCAACGTGTTTTTTTCCTTTTAATTTCTTAAAAACTGTGTAGAAAAAATTGTGATATTGAGTGGTTGGCTCAATAATTTTCATCATCAATAATTGACGTGAT

mRNA sequence

CGTGTGTAGTTCCAAATTTATTTTCTAGGGTTTTTGAGGATCTTTAGTAACGAGACGAAGACTCATTCTATCAGAACATTTCACTCTAACCGCACAAATTAGGAGGATTTTTTCCCCCTGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGAGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATTGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGTCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCCAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGCGGGGATCGCTTTGCTGGAGATACTAATCGTTATGTGGATGATCGTTATGAAAGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGTAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGATACTATAGAGATGGTGTACCTCGTGGGGTTGATAAGTATGGAAGTGGCGGTCCTGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTATTGTTAACACATTATCAGATTTATCAAAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGGAGTACCGATGCCTGACTGAGACAGATTGTTGCGGTGTTGTGTAGTTTTCATGCATCTGAGTTTTTTTGTTCAGAGACACAGATAAATGCTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTCCTAAAATGTCGTGGTGAATCTCGAAGGGAGCAACGTAAGGTTGAGTCGAGGACTCTTAAGGCTTGTTTGATTCATAATTCATAAACAAATTAGTAGAGATACAACTAGAGAGGCCAGTGGCACCATATTCGTGTATTTAGCAGCACCTTTTACTGTTGAGAAAAGGGGAATAATAATAGAGGAAGTAAATATGAGAGACGAAGCTTGAAAATTGGCCTCCCAATGAAGCATCAAAGAACAAACTCCGCGGCTGTCAGGAAGAAATATGGTTCGGTTTGGGCCTCAATTGGAATTACTGACTTGCTTTTCTCCCTTTTTTCCTTCAATATCACAGGGTTATTATTGTTATTTTATTTAAATGTTTCTTCCAATCCATGTTACTGATTTTCTCTTTAACTTTAGGAAAATGAGAAAAGAAAAATGTGCATATTTTGAGTGCTCGACACTATATTTCTTCCACCCAACGTGTTTTTTTCCTTTTAATTTCTTAAAAACTGTGTAGAAAAAATTGTGATATTGAGTGGTTGGCTCAATAATTTTCATCATCAATAATTGACGTGAT

Coding sequence (CDS)

ATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGAGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATTGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGTCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCCAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGCGGGGATCGCTTTGCTGGAGATACTAATCGTTATGTGGATGATCGTTATGAAAGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGTAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGATACTATAGAGATGGTGTACCTCGTGGGGTTGATAAGTATGGAAGTGGCGGTCCTGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYRDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Homology
[Close]
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-77
Identity = 175/313 (55.91%), Postives = 211/313 (67.41%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 TNRYVDDRYESGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG-RYNNDSDR 240
             RY+DDRY+   R+G RDRFDS      Y  RDRY SDRY    DRF  G RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGVP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG- 286
           +P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-72
Identity = 160/299 (53.51%), Postives = 196/299 (65.55%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DTN 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + +
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFD 187

Query: 183 RYVDDRYE-SGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFP 242
           RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY        
Sbjct: 188 RYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLE 247

Query: 243 VNGYGKDRGYYRDGVPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
               G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 NEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.9e-31
Identity = 109/286 (38.11%), Postives = 152/286 (53.15%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G            S + DR++   +RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGAKD 180

Query: 181 DRY-ESGGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNG 240
           DRY     R+G + DR+  SS+D++Y S+D    DRY   G R G G           + 
Sbjct: 181 DRYGAKEDRYGAKDDRY--SSKDDRYSSKD----DRY---GSRDGGG-----------SR 240

Query: 241 YGKDRGYYRDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 278
           YG DR   R G  R  D    G P  +     R+  APYDRP  GG
Sbjct: 241 YGPDRSGERAG-GRSRDGGSRGAPGGE-----RHSRAPYDRPRAGG 243

[Close]
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.1e-24
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 0 

Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   ER LE AF++FG+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSA--RQDECF 125
             M+GQ+   R I+VN+A+ + G     G RGGG    G G YGGGGG      R+   +
Sbjct: 67  EGMNGQDLDGRSITVNEAQSR-GSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGY 126

Query: 126 KCGRLGHWARDCPSVGGGRGRGG 147
             G  G+ +R     GGG G GG
Sbjct: 127 SGGGGGYSSRG----GGGGGYGG 144

[Close]
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.1e-24
Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = 0 

Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGERIISVNKAEPK-MGEDMDH------GYR---GGGYSTGGRGSYGGG 121
            DAI  M+GQ+   R I+VN+A+ +  G    H      GYR   GGGYS GG GSYGGG
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYS-GGGGSYGGG 122

Query: 122 GGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSF 150
           GG R          G          S GGGR  GG  +
Sbjct: 123 GGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGY 159

[Close]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.2e-160
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGDTNRYVDDRYE GG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DG PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DG-PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.2e-160
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGDTNRYVDDRYE GG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DG PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DG-PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.3e-143
Identity = 267/302 (88.41%), Postives = 271/302 (89.74%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGR-GSYGGGGGDRSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGR GSYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESG 180
           DECFKCGRLGHWARDC SVGGGRGR GDSFLARSRLGDSDRGDRFAGD NRYVDDRYE G
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGR-GDSFLARSRLGDSDRGDRFAGDNNRYVDDRYE-G 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD SSRDNKY SRDRYVSDRYPP GDRFGS  YNNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFD-SSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGV----------------PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 286
           RDG                 PRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299

[Close]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.0e-143
Identity = 256/285 (89.82%), Postives = 263/285 (92.28%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR              GGGDRSARQD
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR--------------GGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGG 180
           ECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRYE GG
Sbjct: 121 ECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFD +SRD+KYG+RDRYVS+RYPPGGDRFGS RYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DG PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 255/285 (89.47%), Postives = 263/285 (92.28%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR              GGGDRSARQD
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR--------------GGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGG 180
           ECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRYE GG
Sbjct: 121 ECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFD +SRD+KYG+RDRYVS+RYPPGGDRFGS RYNNDSDRFP+NGYGKDRGYYR
Sbjct: 181 RFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYR 240

Query: 241 DGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DG PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of PI0025132 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGDTNRYVDDRYE GG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DG PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DG-PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of PI0025132 vs. NCBI nr
Match: KAE8648851.1 (hypothetical protein Csa_008374 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 3.5e-157
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 424 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 483

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY-GGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGDRSARQ
Sbjct: 484 MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 543

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGD NRYVDDRY+ G
Sbjct: 544 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 603

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 604 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 663

Query: 241 RDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           RDG PRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 664 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 709

[Close]
BLAST of PI0025132 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 3.5e-157
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY-GGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGDRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGD NRYVDDRY+ G
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           RDG PRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286

[Close]
BLAST of PI0025132 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 564.7 bits (1454), Expect = 4.6e-157
Identity = 278/287 (96.86%), Postives = 281/287 (97.91%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY--GGGGGDRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYES 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR+RLGDSDRGDRFAGD NRYVDDRYE 
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGS RYNNDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           YRDG PRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 287

[Close]
BLAST of PI0025132 vs. NCBI nr
Match: XP_022139343.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 267/302 (88.41%), Postives = 271/302 (89.74%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGR-GSYGGGGGDRSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGR GSYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRYVDDRYESG 180
           DECFKCGRLGHWARDC SVGGGRGR GDSFLARSRLGDSDRGDRFAGD NRYVDDRYE G
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGR-GDSFLARSRLGDSDRGDRFAGDNNRYVDDRYE-G 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD SSRDNKY SRDRYVSDRYPP GDRFGS  YNNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFD-SSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGV----------------PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 286
           RDG                 PRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299

[Close]
BLAST of PI0025132 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-78
Identity = 175/313 (55.91%), Postives = 211/313 (67.41%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 TNRYVDDRYESGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG-RYNNDSDR 240
             RY+DDRY+   R+G RDRFDS      Y  RDRY SDRY    DRF  G RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGVP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG- 286
           +P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of PI0025132 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 274.6 bits (701), Expect = 8.8e-74
Identity = 160/299 (53.51%), Postives = 196/299 (65.55%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DTN 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + +
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFD 187

Query: 183 RYVDDRYE-SGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFP 242
           RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY        
Sbjct: 188 RYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLE 247

Query: 243 VNGYGKDRGYYRDGVPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
               G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 NEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of PI0025132 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 274.6 bits (701), Expect = 8.8e-74
Identity = 160/299 (53.51%), Postives = 196/299 (65.55%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DTN 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + +
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFD 187

Query: 183 RYVDDRYE-SGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFP 242
           RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY        
Sbjct: 188 RYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLE 247

Query: 243 VNGYGKDRGYYRDGVPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
               G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 NEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of PI0025132 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 135.6 bits (340), Expect = 6.4e-32
Identity = 109/286 (38.11%), Postives = 152/286 (53.15%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDTNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G            S + DR++   +RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGAKD 180

Query: 181 DRY-ESGGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNG 240
           DRY     R+G + DR+  SS+D++Y S+D    DRY   G R G G           + 
Sbjct: 181 DRYGAKEDRYGAKDDRY--SSKDDRYSSKD----DRY---GSRDGGG-----------SR 240

Query: 241 YGKDRGYYRDGVPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 278
           YG DR   R G  R  D    G P  +     R+  APYDRP  GG
Sbjct: 241 YGPDRSGERAG-GRSRDGGSRGAPGGE-----RHSRAPYDRPRAGG 243

[Close]
BLAST of PI0025132 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 112.5 bits (280), Expect = 5.8e-25
Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = 0 

Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGERIISVNKAEPK-MGEDMDH------GYR---GGGYSTGGRGSYGGG 121
            DAI  M+GQ+   R I+VN+A+ +  G    H      GYR   GGGYS GG GSYGGG
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYS-GGGGSYGGG 122

Query: 122 GGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSF 150
           GG R          G          S GGGR  GG  +
Sbjct: 123 GGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGY 159

The following BLAST results are available for this feature:
BLAST of PI0025132 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWN51.7e-7755.91Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE... [more]
O227031.2e-7253.51Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE... [more]
Q9LIN38.9e-3138.11Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE... [more]
P493118.1e-2446.85Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1[more]
Q032508.1e-2445.57Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ... [more]
BLAST of PI0025132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BGN56.2e-16098.95glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3CG306.2e-16098.95Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw... [more]
A0A6J1CFE75.3e-14388.41glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=... [more]
A0A6J1GY869.0e-14389.82glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3... [more]
A0A6J1KMD71.2e-14289.47glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366... [more]
BLAST of PI0025132 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446829.11.3e-15998.95PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] ... [more]
KAE8648851.13.5e-15797.20hypothetical protein Csa_008374 [Cucumis sativus][more]
XP_004142412.13.5e-15797.20glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869... [more]
XP_038892830.14.6e-15796.86glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida][more]
XP_022139343.11.1e-14288.41glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia][more]
BLAST of PI0025132 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04280.11.2e-7855.91RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.18.8e-7453.51RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.28.8e-7453.51RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT3G26420.16.4e-3238.11RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G21660.15.8e-2545.57cold, circadian rhythm, and rna binding 2 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 121..137
e-value: 1.3E-5
score: 34.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 121..137
e-value: 2.3E-8
score: 33.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 122..137
score: 11.086722
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 8..81
e-value: 2.3E-28
score: 110.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..78
e-value: 4.8E-20
score: 71.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..85
score: 19.484827
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..116
e-value: 7.8E-31
score: 109.0
NoneNo IPR availableGENE3D4.10.60.10coord: 117..145
e-value: 1.3E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..208
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..247
NoneNo IPR availablePANTHERPTHR15241:SF294GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKEcoord: 1..247
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 113..137
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025132.1PI0025132.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding