PI0025127 (gene) Melon (PI 482460) v1

Overview
NamePI0025127
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 4810847 .. 4811742 (-)
RNA-Seq ExpressionPI0025127
SyntenyPI0025127
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCGGAGCACGCCAATTATCTTCCCTAAACCTAATGCTTCTCCCATCACCCATAGCAAACTCAACAAAATTAAAGAAACGCTCCTTTTGCTTCATAATACCAAACCCAAAGCCTGAACTTTCTGTTATATCACAAGGGAACTCCAACCACGGTCATCAATCCCAAAAATAGCACTGATCACACGCCTCAAGAGGGCACACCACAAACTAAAGAGGACACCACAGACTAAAGCAACCCAACAATTGAAGGAACGAGTAAGGATTTCTTAAGTGTGATTTTGTAACAACCAAACTTCTTGTGTAAGGAAGGATTTCTTAAGGGTCTGATTTTGTAATGACCCAACTTTCAATGTAACTAGTAGAGTGTCTTTTTGTAGCTAACTAAATTTGTTTTCATTTTGGTGTTGGGCCTTATGGTCGAACTGGAATTGTTAGCTAGGCAAAGACCAGTTCCTTTGGTTGGTAAGAAAGTGGGGTGGATTTGATTTTATGTGAGGGAGTATCAAGAGATGCAGGTGAGGCCCTCAATGAAGATGCAGTCGGGACAGAGGGGTGGTGTTTGGCCTGTGAGCAATGGGGGAGATGAAGCAAAGGTGGGTGGTTTCAAAGGCTGCTTTTTTTAAACTTCATATTGATGCCTCGTATAGCATGGAGAGAAGCCACACAGGTCTGAGTGGTATTTTTCAAGGTTCGGATGGGAGGGTTGTTGTGGCTTTCTCAGTTTTTTCGGAAGGGGAATCAATGTGTTGTCCGCGAAAACGTTGGCGCTCCTGTCCAGTTTAAAGATGCCTGATGCAAAGGAGTTGGCAATCTTTTGGGTAGAATCAGATTCTCAAGTGTTGGTGAAGGCTATCCTGCTAATAGTTTGTCGGGTTCTCCTCAGGGGATCATTTTGA

mRNA sequence

TTGCGGAGCACGCCAATTATCTTCCCTAAACCTAATGCTTCTCCCATCACCCATAGCAAACTCAACAAAATTAAAGAAACGCTCCTTTTGCTTCATAATACCAAACCCAAAGCCTGAACTTTCTGTTATATCACAAGGGAACTCCAACCACGGTCATCAATCCCAAAAATAGCACTGATCACACGCCTCAAGAGGGCACACCACAAACTAAAGAGGACACCACAGACTAAAGCAACCCAACAATTGAAGGAACGAGTAAGGATTTCTTAAGTGTGATTTTGTAACAACCAAACTTCTTGTGTAAGGAAGGATTTCTTAAGGGTCTGATTTTGTAATGACCCAACTTTCAATGTAACTAGTAGAGTGTCTTTTTGTAGCTAACTAAATTTGTTTTCATTTTGGTGTTGGGCCTTATGGTCGAACTGGAATTGTTAGCTAGGCAAAGACCAGTTCCTTTGGTTGGTAAGAAAGTGGGGTGGATTTGATTTTATGTGAGGGAGTATCAAGAGATGCAGGTGAGGCCCTCAATGAAGATGCAGTCGGGACAGAGGGGTGGTGTTTGGCCTGTGAGCAATGGGGGAGATGAAGCAAAGGGTTGTTGTGGCTTTCTCAGTTTTTTCGGAAGGGGAATCAATGTGTTGTCCGCGAAAACGTTGGCGCTCCTGTCCAGTTTAAAGATGCCTGATGCAAAGGAGTTGGCAATCTTTTGGGTAGAATCAGATTCTCAAGTGTTGGTGAAGGCTATCCTGCTAATAGTTTGTCGGGTTCTCCTCAGGGGATCATTTTGA

Coding sequence (CDS)

ATGCAGGTGAGGCCCTCAATGAAGATGCAGTCGGGACAGAGGGGTGGTGTTTGGCCTGTGAGCAATGGGGGAGATGAAGCAAAGGGTTGTTGTGGCTTTCTCAGTTTTTTCGGAAGGGGAATCAATGTGTTGTCCGCGAAAACGTTGGCGCTCCTGTCCAGTTTAAAGATGCCTGATGCAAAGGAGTTGGCAATCTTTTGGGTAGAATCAGATTCTCAAGTGTTGGTGAAGGCTATCCTGCTAATAGTTTGTCGGGTTCTCCTCAGGGGATCATTTTGA

Protein sequence

MQVRPSMKMQSGQRGGVWPVSNGGDEAKGCCGFLSFFGRGINVLSAKTLALLSSLKMPDAKELAIFWVESDSQVLVKAILLIVCRVLLRGSF
Homology
[Close]
BLAST of PI0025127 vs. ExPASy TrEMBL
Match: A0A0A0M2U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615200 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.7e-14
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1  MQVRPSMKMQSGQRGGVWPVSNGGDEAKGCCGFLSFFGRGINVLSAKTLALLSSLKMPDA 60
          MQVRPSMKM  GQRGGVWP SNG D A+      SF G GINVLS KTLALLSSLKMPDA
Sbjct: 1  MQVRPSMKMLLGQRGGVWPASNGEDVAQ------SFSGGGINVLSTKTLALLSSLKMPDA 60

Query: 61 KELAIF 67
          K LA F
Sbjct: 61 KGLASF 60

[Close]
BLAST of PI0025127 vs. NCBI nr
Match: KGN66501.1 (hypothetical protein Csa_007255 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1  MQVRPSMKMQSGQRGGVWPVSNGGDEAKGCCGFLSFFGRGINVLSAKTLALLSSLKMPDA 60
          MQVRPSMKM  GQRGGVWP SNG D A+      SF G GINVLS KTLALLSSLKMPDA
Sbjct: 1  MQVRPSMKMLLGQRGGVWPASNGEDVAQ------SFSGGGINVLSTKTLALLSSLKMPDA 60

Query: 61 KELAIF 67
          K LA F
Sbjct: 61 KGLASF 60

The following BLAST results are available for this feature:
BLAST of PI0025127 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025127 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2U85.7e-1474.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615200 PE=4 SV=1[more]
BLAST of PI0025127 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66501.11.2e-1374.24hypothetical protein Csa_007255 [Cucumis sativus][more]
BLAST of PI0025127 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025127.1PI0025127.1mRNA