PI0025105 (gene) Melon (PI 482460) v1

Overview
NamePI0025105
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr05: 17485576 .. 17486529 (+)
RNA-Seq ExpressionPI0025105
SyntenyPI0025105
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCATCCTTTTTCACAAAAAAGAAAAATCCCCTCTCCTTTTGCCTGCGCCTTCCGTCGTATCCCTCATAGTCGTCGTCCTCCAATATCATTCATTGACTAGAAGTTTTAAGGTATGTTTATTTTCTCTTCTTTACATACATTTATGTTTATATAATGTGAATATATATACATGGTTTTGTATGGTTTTATTAAATTTATAAAATTTGGGTTTTATAGTGGGAATGTATTTTGTATGATTTTGTTGTACTATATTTTTATTTACATATTGTGGATATATATTTGTATGATTTTGTTGTATATTTTTGTTTACATGGTGTGAATTTATTTGTATGATTTTGTTGACTTAACCTAGTCGTGGATTGGGTACATGATTTTGTTGAATAATACTTAAACTGTAATTCTTGAAATTAATTGATTTTAGGTATCTTATTTATTTGTACTCTTGGGGTGCTGCATGCCTTGCATGACTTTATAAGGAATTGTGTCGAGCTAGCAATGTGCTAGCAATGTACAATCCTTGGAAATAACTGGTCTATTAATGCTATTGCAAATATCGACATATGATAGATTTCCTATTGTAGCACCACACGTTGCTTTACAGGCTCTAGTTGCTCAACCACTGAATTCCAAGAATTTTCTTTTGTTTGTTTTTTTATAATATCCAATAGTTAGATATTTGCACTTTTCATAATTTATTGTTATTATTTTTTTTTCATATTAGATGGAGTAATGTCCTACTTGCCTGAACAATCAGTAAATATGTTGTTAATATATCGACAGATATTTGACTGACTGATGCACACTCAAGTAGTAAAATATTATATGAATGAATACTACTTATTTTGTGTTGTCTACTTATGTTTGTTTTTTTATAACAGATTAATTGGACACCATATACACCCGATATTATGGCATTGTTGCCTGATCGATGTCATAATGGTGAATAG

mRNA sequence

ATGCCTTCCATCCTTTTTCACAAAAAAGAAAAATCCCCTCTCCTTTTGCCTGCGCCTTCCGTCGTATCCCTCATAGTCGTCGTCCTCCAATATCATTCATTGACTAGAAGTTTTAAGATTAATTGGACACCATATACACCCGATATTATGGCATTGTTGCCTGATCGATGTCATAATGGTGAATAG

Coding sequence (CDS)

ATGCCTTCCATCCTTTTTCACAAAAAAGAAAAATCCCCTCTCCTTTTGCCTGCGCCTTCCGTCGTATCCCTCATAGTCGTCGTCCTCCAATATCATTCATTGACTAGAAGTTTTAAGATTAATTGGACACCATATACACCCGATATTATGGCATTGTTGCCTGATCGATGTCATAATGGTGAATAG

Protein sequence

MPSILFHKKEKSPLLLPAPSVVSLIVVVLQYHSLTRSFKINWTPYTPDIMALLPDRCHNGE
Homology
[Close]
BLAST of PI0025105 vs. ExPASy TrEMBL
Match: A0A5A7TD03 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00890 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.0e-04
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 39  KINWTPYTPDIMALLPDRCHNGE 62
           +INWTPYT D+MALLPDRCHNG+
Sbjct: 296 QINWTPYTSDVMALLPDRCHNGQ 318

[Close]
BLAST of PI0025105 vs. ExPASy TrEMBL
Match: A0A5D3BQU0 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00870 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.0e-04
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 39  KINWTPYTPDIMALLPDRCHNGE 62
           +INWTPYT D+MALLPDRCHNG+
Sbjct: 296 QINWTPYTSDVMALLPDRCHNGQ 318

[Close]
BLAST of PI0025105 vs. NCBI nr
Match: XP_011656076.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus] >XP_031740838.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus] >XP_031740839.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sativus] >KAE8648996.1 hypothetical protein Csa_009127 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 39  KINWTPYTPDIMALLPDRCHNGE 62
           +INWTPYTPDIMALLPDRCHNG+
Sbjct: 296 QINWTPYTPDIMALLPDRCHNGQ 318

[Close]
BLAST of PI0025105 vs. NCBI nr
Match: XP_031740840.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 39  KINWTPYTPDIMALLPDRCHNGE 62
           +INWTPYTPDIMALLPDRCHNG+
Sbjct: 229 QINWTPYTPDIMALLPDRCHNGQ 251

The following BLAST results are available for this feature:
BLAST of PI0025105 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025105 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TD036.0e-0482.61Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5D3BQU06.0e-0482.61Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
BLAST of PI0025105 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656076.11.1e-0491.30serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis sat... [more]
XP_031740840.11.1e-0491.30serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis sat... [more]
BLAST of PI0025105 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025105.1PI0025105.1mRNA