PI0024991 (gene) Melon (PI 482460) v1

Overview
NamePI0024991
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 22862486 .. 22862815 (-)
RNA-Seq ExpressionPI0024991
SyntenyPI0024991
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGAAAGTACTTCAAACCACAATCTCGAAAGTACTTCAAACCTGGCGAGTTAGTACAGATTCGAAACAAGCAAATCACCGCGAAACGGAATCGAGTCAAATCAGTTTCAGAAATTTGTCTCCACCGTACTCTGAAATCACATCTTTTCAATATCTCCAATCAATTAGAGCTTAGGATGACAGAGGATTGTCATGATGGTGTTCTGTTTTGCCTTGATAGGAAGATCGTCGCGATGAAGCCGATCAATTGGTTTCCGAACCCTAATTTGGAGATTATTTCAACTATTGATTCAGCTGATGATATTGTTTCTTTGGAAGTGGCTTAA

mRNA sequence

ATGAATGGAAAGTACTTCAAACCACAATCTCGAAAGTACTTCAAACCTGGCGAGTTAGTACAGATTCGAAACAAGCAAATCACCGCGAAACGGAATCGAGTCAAATCAGTTTCAGAAATTTGTCTCCACCGTACTCTGAAATCACATCTTTTCAATATCTCCAATCAATTAGAGCTTAGGATGACAGAGGATTGTCATGATGGTGTTCTGTTTTGCCTTGATAGGAAGATCGTCGCGATGAAGCCGATCAATTGGTTTCCGAACCCTAATTTGGAGATTATTTCAACTATTGATTCAGCTGATGATATTGTTTCTTTGGAAGTGGCTTAA

Coding sequence (CDS)

ATGAATGGAAAGTACTTCAAACCACAATCTCGAAAGTACTTCAAACCTGGCGAGTTAGTACAGATTCGAAACAAGCAAATCACCGCGAAACGGAATCGAGTCAAATCAGTTTCAGAAATTTGTCTCCACCGTACTCTGAAATCACATCTTTTCAATATCTCCAATCAATTAGAGCTTAGGATGACAGAGGATTGTCATGATGGTGTTCTGTTTTGCCTTGATAGGAAGATCGTCGCGATGAAGCCGATCAATTGGTTTCCGAACCCTAATTTGGAGATTATTTCAACTATTGATTCAGCTGATGATATTGTTTCTTTGGAAGTGGCTTAA

Protein sequence

MNGKYFKPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKSHLFNISNQLELRMTEDCHDGVLFCLDRKIVAMKPINWFPNPNLEIISTIDSADDIVSLEVA
Homology
BLAST of PI0024991 vs. ExPASy TrEMBL
Match: A0A5A7UKR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001140 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20
Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0

Query: 2  NGKYFKPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELR 61
          N   F+ QSRKYFKPGEL ++R+ QI +KRNRVKSVS+I LHR L+S  +F+I NQLELR
Sbjct: 3  NSSNFEKQSRKYFKPGELARMRDLQIISKRNRVKSVSKIYLHRALESPPIFDIYNQLELR 62

Query: 62 MTEDCHDGVLFCLDR-KIVAMKPINWFPNPNLEI 94
          +TED   G  F LDR KI  +KP+N F NPNLEI
Sbjct: 63 VTEDSRGGAPFFLDRKKITTIKPLNCFSNPNLEI 96

BLAST of PI0024991 vs. ExPASy TrEMBL
Match: A0A0A0LZ95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 0

Query: 7   KPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDC 66
           K QSRKYFKPGEL QIR+ QI AKRNRVKS+S+ICLH  ++S  +F+ISNQLE RM + C
Sbjct: 8   KKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLEFRMAKVC 67

Query: 67  HDGVLFCLDR-KIVAMKPINWFPNPNLE-----------IISTIDSADD 103
            +G  F  +R KI A+KP N F NPNLE           II ++DS  +
Sbjct: 68  PNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSE 116

BLAST of PI0024991 vs. ExPASy TrEMBL
Match: A0A5D3CF62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001100 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.4e-13
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0

Query: 22 IRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDCHDGVLFCLDR-KIVA 81
          +R+ QI AKRNRVKSVS+I LHR L+S  +F+I NQLELR+TED   G  F LDR KI  
Sbjct: 1  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRVTEDSRGGAPFFLDRKKITT 60

Query: 82 MKPINWFPNPNLEI 94
          +KP+N F NPNLEI
Sbjct: 61 IKPLNCFSNPNLEI 74

BLAST of PI0024991 vs. ExPASy TrEMBL
Match: A0A0A0LZP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599410 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.0e-09
Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 7  KPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDC 66
          K QSRKYFK  EL  IR+ QI  KRN          H  ++S  +F+IS+QLE RM +  
Sbjct: 8  KKQSRKYFKSNELAHIRDSQINVKRN----------HPIMESPPIFDISDQLEFRMVKVY 67

Query: 67 HDGVLFCLD-RKIVAMKPINWFPNPNLE 93
           +G  F L+ +KIVA+KP+N F NPNLE
Sbjct: 68 RNGASFFLNKKKIVAIKPVNLFLNPNLE 85

BLAST of PI0024991 vs. NCBI nr
Match: KAA0055730.1 (hypothetical protein E6C27_scaffold181G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-20
Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0

Query: 2  NGKYFKPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELR 61
          N   F+ QSRKYFKPGEL ++R+ QI +KRNRVKSVS+I LHR L+S  +F+I NQLELR
Sbjct: 3  NSSNFEKQSRKYFKPGELARMRDLQIISKRNRVKSVSKIYLHRALESPPIFDIYNQLELR 62

Query: 62 MTEDCHDGVLFCLDR-KIVAMKPINWFPNPNLEI 94
          +TED   G  F LDR KI  +KP+N F NPNLEI
Sbjct: 63 VTEDSRGGAPFFLDRKKITTIKPLNCFSNPNLEI 96

BLAST of PI0024991 vs. NCBI nr
Match: KGN66369.1 (hypothetical protein Csa_007262 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 6.4e-19
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 0

Query: 7   KPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDC 66
           K QSRKYFKPGEL QIR+ QI AKRNRVKS+S+ICLH  ++S  +F+ISNQLE RM + C
Sbjct: 8   KKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLEFRMAKVC 67

Query: 67  HDGVLFCLDR-KIVAMKPINWFPNPNLE-----------IISTIDSADD 103
            +G  F  +R KI A+KP N F NPNLE           II ++DS  +
Sbjct: 68  PNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSE 116

BLAST of PI0024991 vs. NCBI nr
Match: TYK09980.1 (hypothetical protein E5676_scaffold16G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0

Query: 22 IRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDCHDGVLFCLDR-KIVA 81
          +R+ QI AKRNRVKSVS+I LHR L+S  +F+I NQLELR+TED   G  F LDR KI  
Sbjct: 1  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRVTEDSRGGAPFFLDRKKITT 60

Query: 82 MKPINWFPNPNLEI 94
          +KP+N F NPNLEI
Sbjct: 61 IKPLNCFSNPNLEI 74

BLAST of PI0024991 vs. NCBI nr
Match: KGN66347.1 (hypothetical protein Csa_007251 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08
Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 7  KPQSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRTLKS-HLFNISNQLELRMTEDC 66
          K QSRKYFK  EL  IR+ QI  KRN          H  ++S  +F+IS+QLE RM +  
Sbjct: 8  KKQSRKYFKSNELAHIRDSQINVKRN----------HPIMESPPIFDISDQLEFRMVKVY 67

Query: 67 HDGVLFCLD-RKIVAMKPINWFPNPNLE 93
           +G  F L+ +KIVA+KP+N F NPNLE
Sbjct: 68 RNGASFFLNKKKIVAIKPVNLFLNPNLE 85

BLAST of PI0024991 vs. NCBI nr
Match: XP_038902395.1 (uncharacterized protein LOC120089036 [Benincasa hispida])

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-06
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0

Query: 9   QSRKYFKPGELVQIRNKQITAKRNRVKSVSEICLHRT--LKSHLFNISNQLELRMTEDCH 68
           Q  KY KPG L Q+R+ QI+AK  R  S+S+I L RT  L S   +   Q E+ + +D  
Sbjct: 18  QFHKYLKPGALAQMRDSQISAKWYRFNSLSQIYLRRTSPLPSSPLSTIGQSEIDVVDDFP 77

Query: 69  DGV-----LFCLDRKIVAMKPINWFPNPNLEIISTIDSADDIVSL 107
                    FCL RK +A     WFP+PNL+  +T  + D +V +
Sbjct: 78  SLAGRGYGPFCLKRKKLAAIKATWFPSPNLQTPTTDITRDPVVDV 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UKR61.7e-2062.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LZ953.1e-1955.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1[more]
A0A5D3CF627.4e-1363.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LZP65.0e-0948.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0055730.13.4e-2062.77hypothetical protein E6C27_scaffold181G001140 [Cucumis melo var. makuwa][more]
KGN66369.16.4e-1955.05hypothetical protein Csa_007262 [Cucumis sativus][more]
TYK09980.11.5e-1263.51hypothetical protein E5676_scaffold16G001100 [Cucumis melo var. makuwa][more]
KGN66347.11.0e-0848.86hypothetical protein Csa_007251 [Cucumis sativus][more]
XP_038902395.18.2e-0638.10uncharacterized protein LOC120089036 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024991.1PI0024991.1mRNA