PI0024931 (gene) Melon (PI 482460) v1

Overview
NamePI0024931
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 8450506 .. 8450754 (+)
RNA-Seq ExpressionPI0024931
SyntenyPI0024931
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAAGCAAGTGCCGCCGCCGTTGATTTGTTTTCGTAGGTTACCTAGCGCCGCTGCAGCTTGTTGCCTAGAGAAGAAGAACTGGGAGACGTCGCACGAGCTGTTCGTGGGTCACTTGCACTTGTACATCTTGCTGCCGCGAGGAATTGAATCCGCCGGAGTAGGAAGGACCACCACAGTCCAGCTCTTCGCCGAGTTGGACCGCCTGAGGATCGCCGGAGATGATGGATTCGCCGTCAGGTGCTAA

mRNA sequence

ATGCACAAGCAAGTGCCGCCGCCGTTGATTTGTTTTCGTAGGTTACCTAGCGCCGCTGCAGCTTGTTGCCTAGAGAAGAAGAACTGGGAGACGTCGCACGAGCTGTTCGTGGGAATTGAATCCGCCGGAGTAGGAAGGACCACCACAGTCCAGCTCTTCGCCGAGTTGGACCGCCTGAGGATCGCCGGAGATGATGGATTCGCCGTCAGGTGCTAA

Coding sequence (CDS)

ATGCACAAGCAAGTGCCGCCGCCGTTGATTTGTTTTCGTAGGTTACCTAGCGCCGCTGCAGCTTGTTGCCTAGAGAAGAAGAACTGGGAGACGTCGCACGAGCTGTTCGTGGGAATTGAATCCGCCGGAGTAGGAAGGACCACCACAGTCCAGCTCTTCGCCGAGTTGGACCGCCTGAGGATCGCCGGAGATGATGGATTCGCCGTCAGGTGCTAA

Protein sequence

MHKQVPPPLICFRRLPSAAAACCLEKKNWETSHELFVGIESAGVGRTTTVQLFAELDRLRIAGDDGFAVRC
Homology
[Close]
BLAST of PI0024931 vs. ExPASy TrEMBL
Match: A0A0A0LCR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824980 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 53/68 (77.94%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 5  VPPPLICFRRLPSAAAACCLEKKN-WETSHELFVGIESAGVGRTTTVQLFA-ELDRLRIA 64
          +PP LICFRRLPSA AACC EKKN WETS E FVG ESAGVGR  TV+LF  EL RLRIA
Sbjct: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60

Query: 65 GDDGFAVR 71
          GD GFAVR
Sbjct: 61 GDGGFAVR 68

[Close]
BLAST of PI0024931 vs. NCBI nr
Match: KGN59553.1 (hypothetical protein Csa_000968 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18
Identity = 53/68 (77.94%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 5  VPPPLICFRRLPSAAAACCLEKKN-WETSHELFVGIESAGVGRTTTVQLFA-ELDRLRIA 64
          +PP LICFRRLPSA AACC EKKN WETS E FVG ESAGVGR  TV+LF  EL RLRIA
Sbjct: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60

Query: 65 GDDGFAVR 71
          GD GFAVR
Sbjct: 61 GDGGFAVR 68

The following BLAST results are available for this feature:
BLAST of PI0024931 vs.
Match NameE-valueIdentityDescription
BLAST of PI0024931 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCR71.3e-1877.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824980 PE=4 SV=1[more]
BLAST of PI0024931 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59553.12.7e-1877.94hypothetical protein Csa_000968 [Cucumis sativus][more]
BLAST of PI0024931 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024931.1PI0024931.1mRNA