PI0024922 (gene) Melon (PI 482460) v1

Overview


Name	PI0024922
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Actin-related T1
Location	chr04: 4291569 .. 4293241 (+)
RNA-Seq Expression	PI0024922
Synteny	PI0024922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGTACTTTGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACCGATCCAGATCGTTTTGTCAACATTTGGATTGGATCCTTCGCGTTTTCTGTTCTTACATGGAACAATCCCTACATGTGGCAACTCTCTAATCAATTCAAGTACTTGTTTCTTTCTTTCTTTCTTTCTCAGTGAAATGTCTTGATTCTTTAAACTACAGCGCTGTTAGTTTGAATTCTCGTTCCTGCTTCATTACTCTGTTGTTATGTACTTGTTCAATTTCTGTAGGAATAGCTTTACATTATTTTTGGTGGGTCGGGTTTGAATCTTTTATTTATTTATTTATAAATCCCAGTTGACCTTATCGCTCTAGCAGTTTTAGGGACTGTAGAGGGCTCAGTTTCTTTGCGTGTACAGTGATAAATCTTTATACCTATTATACATTGTCTGTATAGGAATTAACATCTTTTGTTCTGCGAAAGAGTTGATTCTGTTATTGAAATTTATGTTTCTTGTCATTGGAATTTATGCTGCCCTCCAAAAAATAATTGTTGTCAACGCTTCTACCTGTACATCAAACTAAATTTTGTAGTTTGAATAGTCTGTCTGGACACTCCGACACTTGTTAGACACGAATAAGAGACTTGTTAGTGCAACAAATGTATTAGACTTATATAGAACACTACATAAATAGACTAAAAAGACAACAATAATTGTGAAATACATCAACCTAAGTTTTTAAGCATATACATTCATGCATTAGCTCATTTAGTTAGAAATTTCTTTTGGTATAAAAATGATATATAGTTCTAAAATGTATATTTTAATAAACGTGTCCTCGTCGTGTTCTAGATTGTAAAAAAATGACATGACACCATGTTCTGTGGTATTTGTATCTGTGCTTCTTAGTCAACAAGAATGTAAATTTGTTTTTCCTACGAAGTATATGAACTAGGATAATTATATATGATTTTCTTCTTATGTTCTATGCTATTCTTGTTTACTGATTCTGCTTCTTTTGGTCTTGAGAAACACTGTCGTAAATGAATTTGATATAATGGATTTTTATATCAGGTTTCTTTTGGTCTTGAGAAACACTGTCGTAAATGAATCTGATATAATGGATTTTTATATCAGGTTTTTGCCTTGTGCTATCTTGGTTGGTTCATTATATTGTCTTATTGCTTAGAACTCGAAAAACGAATCTAATTTTGGTATAAATGTGCATTCTGGGTTGTAGGCTGTTGATATAGGAGATATTGGCATCATTACTTGTTGCTTTTTGTACACTTCTTCTTTTGCATCATTCCCATCAGAGATCATGGGTGTGGGCTGTGATTCTTTATATTGTTTTTGCTGTTACTGTTTTGCAATTTCTTAGAACTCAAAACACGAATCTAATTTATAAAATGTGCATTCTCAATTTGTAATTTATAGTTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAGAAGGCTCGTGAAAAGAATCAGCCATACAAGTTCAAGGTACGATGTTCTACTCCATTTTACATTGAAACAACCACGTTTAACTTTTAATATCTTATGGAATGGCTATGTTCTTATAAAATTTCTGTTGATGCAGTGGAATCAATACATGGACAGGGACCACCGGGATTCCTATTATTTTAACTGGCCTGTTTACTTTCCTTAG

mRNA sequence

ATGGAGAAGTACTTTGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACCGATCCAGATCGTTTTGTCAACATTTGGATTGGATCCTTCGCGTTTTCTGTTCTTACATGGAACAATCCCTACATGTGGCAACTCTCTAATCAATTCAATTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAGAAGGCTCGTGAAAAGAATCAGCCATACAAGTTCAAGTGGAATCAATACATGGACAGGGACCACCGGGATTCCTATTATTTTAACTGGCCTGTTTACTTTCCTTAG

Coding sequence (CDS)

ATGGAGAAGTACTTTGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACCGATCCAGATCGTTTTGTCAACATTTGGATTGGATCCTTCGCGTTTTCTGTTCTTACATGGAACAATCCCTACATGTGGCAACTCTCTAATCAATTCAATTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAGAAGGCTCGTGAAAAGAATCAGCCATACAAGTTCAAGTGGAATCAATACATGGACAGGGACCACCGGGATTCCTATTATTTTAACTGGCCTGTTTACTTTCCTTAG

Protein sequence

MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP

Homology

[Close]

BLAST of PI0024922 vs. ExPASy TrEMBL
Match: A0A6J1CS98 (uncharacterized protein LOC111014295 OS=Momordica charantia OX=3673 GN=LOC111014295 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.1e-53
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPH DPDRFVNIWIGS AFSVLTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAR+KNQPY+FKWNQYMD+DHRDSYYFNWPVYFP
Sbjct: 61  QYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP 99

[Close]

BLAST of PI0024922 vs. ExPASy TrEMBL
Match: A0A6J1J1C9 (uncharacterized protein LOC111481799 OS=Cucurbita maxima OX=3661 GN=LOC111481799 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDPDRFVNIWIGS AFS+LTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+ HRDSYY+NWPVYFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKLHRDSYYYNWPVYFP 99

[Close]

BLAST of PI0024922 vs. ExPASy TrEMBL
Match: A0A6J1F2Q8 (uncharacterized protein LOC111441842 OS=Cucurbita moschata OX=3662 GN=LOC111441842 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDPDRFVNIWIGS AFS+LTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+ HRDSYY+NWPVYFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKLHRDSYYYNWPVYFP 99

[Close]

BLAST of PI0024922 vs. ExPASy TrEMBL
Match: A0A1S3B6B6 (uncharacterized protein LOC103486497 OS=Cucumis melo OX=3656 GN=LOC103486497 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDP RF NIWIG+  FSVLTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+DHRDSYYFNWP+YFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP 99

[Close]

BLAST of PI0024922 vs. ExPASy TrEMBL
Match: A0A6P8DKX4 (uncharacterized protein LOC116208603 OS=Punica granatum OX=22663 GN=LOC116208603 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPH DP+RFVNIWIGS AFS LTW NPYMWQL+NQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPERFVNIWIGSAAFSALTWFNPYMWQLTNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAR KNQPYKFKWN+YMD+DHRDSYYFNWPVYFP
Sbjct: 61  QYHWKKARAKNQPYKFKWNEYMDKDHRDSYYFNWPVYFP 99

[Close]

BLAST of PI0024922 vs. NCBI nr
Match: XP_038903427.1 (uncharacterized protein LOC120090020 [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 8.1e-53
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDPDRFVNIWIGS AFSV TW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSVFTWFNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAR+KNQPY+FKWNQYMD+DHRDSYYFNWPVYFP
Sbjct: 61  QYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP 99

[Close]

BLAST of PI0024922 vs. NCBI nr
Match: XP_022144660.1 (uncharacterized protein LOC111014295 [Momordica charantia])

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPH DPDRFVNIWIGS AFSVLTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAR+KNQPY+FKWNQYMD+DHRDSYYFNWPVYFP
Sbjct: 61  QYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP 99

[Close]

BLAST of PI0024922 vs. NCBI nr
Match: XP_023529054.1 (uncharacterized protein LOC111791803 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 1.8e-52
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDPDRFVNIWIGS AFSVLTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSVLTWKNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+ HRDSYY+NWPVYFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKLHRDSYYYNWPVYFP 99

[Close]

BLAST of PI0024922 vs. NCBI nr
Match: XP_022934761.1 (uncharacterized protein LOC111441842 [Cucurbita moschata] >XP_022983166.1 uncharacterized protein LOC111481799 [Cucurbita maxima] >KAG6580616.1 hypothetical protein SDJN03_20618, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017373.1 hypothetical protein SDJN02_19238 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.3 bits (547), Expect = 2.4e-52
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDPDRFVNIWIGS AFS+LTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+ HRDSYY+NWPVYFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKLHRDSYYYNWPVYFP 99

[Close]

BLAST of PI0024922 vs. NCBI nr
Match: XP_008442705.1 (PREDICTED: uncharacterized protein LOC103486497 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 2.6e-51
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPHTDP RF NIWIG+  FSVLTW NPYMWQLSNQFNWHDKAFLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAREKNQPY+FKWNQYMD+DHRDSYYFNWP+YFP
Sbjct: 61  QYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP 99

[Close]

BLAST of PI0024922 vs. TAIR 10
Match: AT3G09860.1 (unknown protein; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 2.7e-46
Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1   MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSFAFSVLTWNNPYMWQLSNQFNWHDKAFLFE 60
           MEKYFGNAYRGDPGVPH D DRFVNIWIGS AFSVLTW NPYMWQLSNQFN+HDK  LFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADADRFVNIWIGSAAFSVLTWVNPYMWQLSNQFNYHDKWMLFE 60

Query: 61  QYHWKKAREKNQPYKFKWNQYMDRDHRDSYYFNWPVYFP 100
           QYHWKKAR K QPY+FKWN+ + ++ RDSYY+NWPVYFP
Sbjct: 61  QYHWKKARAKKQPYEFKWNK-IPKEVRDSYYYNWPVYFP 98

The following BLAST results are available for this feature:

BLAST of PI0024922 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS98	5.1e-53	93.94	uncharacterized protein LOC111014295 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1J1C9	1.1e-52	92.93	uncharacterized protein LOC111481799 OS=Cucurbita maxima OX=3661 GN=LOC111481799...	[more]
A0A6J1F2Q8	1.1e-52	92.93	uncharacterized protein LOC111441842 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A1S3B6B6	1.3e-51	90.91	uncharacterized protein LOC103486497 OS=Cucumis melo OX=3656 GN=LOC103486497 PE=...	[more]
A0A6P8DKX4	1.6e-51	90.91	uncharacterized protein LOC116208603 OS=Punica granatum OX=22663 GN=LOC116208603...	[more]

BLAST of PI0024922 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903427.1	8.1e-53	93.94	uncharacterized protein LOC120090020 [Benincasa hispida]	[more]
XP_022144660.1	1.1e-52	93.94	uncharacterized protein LOC111014295 [Momordica charantia]	[more]
XP_023529054.1	1.8e-52	93.94	uncharacterized protein LOC111791803 [Cucurbita pepo subsp. pepo]	[more]
XP_022934761.1	2.4e-52	92.93	uncharacterized protein LOC111441842 [Cucurbita moschata] >XP_022983166.1 unchar...	[more]
XP_008442705.1	2.6e-51	90.91	PREDICTED: uncharacterized protein LOC103486497 [Cucumis melo]	[more]

BLAST of PI0024922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09860.1	2.7e-46	81.82	unknown protein; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36360	ACTIN T1-LIKE PROTEIN	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024922.1	PI0024922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane