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PI0024911 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTTTAAAACTTTGTTAAGAGGAGTTTCTAAACGAAATGAAAAAACTTTTAATTTTCGTGACTGTTTCAAACTAAAGAACCAAGGCAATAACATCTTGAAATCCTTATTACATCTACTAGAAAAAGATGTGCAGGGTTTCTATGATCAGGTTTTTCTGTTCTTTCCTTGTATTAAGTTTAATTGCATACCCATAGATAATTATAGAGTATAACATAACTTGTTGCTTCAATTGCAGGATATTTATGATGGGGGTCTTCATCTTGAATTTGGGTTGATGTATCCAGGTAGTGAAATTCCAGAATGGTTTAGTAATCAAACTGAGGGCAACACTGTAACCCTCCAACTTCCTCCACATTGTATAGATAACACTTTGGTGTTTGCTTCTTGTCTTATCGTTTCTCCCGATGAGGACTTATATCATGATGTGTAAGTTGATTTTCAATTGATATTTCAACATGATGGTGAGAATAGCACTCATAGGTTTTCCCCTTTCTGGAGTGTAGTACAGCGACGAACTAG ATGAGCTTTAAAACTTTGTTAAGAGGAGTTTCTAAACGAAATGAAAAAACTTTTAATTTTCGTGACTGTTTCAAACTAAAGAACCAAGGCAATAACATCTTGAAATCCTTATTACATCTACTAGAAAAAGATGTGCAGGGTTTCTATGATCAGGATATTTATGATGGGGGTCTTCATCTTGAATTTGGGTTGATGTATCCAGGTAGTGAAATTCCAGAATGGTTTAGTAATCAAACTGAGGGCAACACTGTAACCCTCCAACTTCCTCCACATTGTATAGATAACACTTTGGTGTTTGCTTCTTGTCTTATCGTTTCTCCCGATGAGGACTTATATCATGATGTTACAGCGACGAACTAG ATGAGCTTTAAAACTTTGTTAAGAGGAGTTTCTAAACGAAATGAAAAAACTTTTAATTTTCGTGACTGTTTCAAACTAAAGAACCAAGGCAATAACATCTTGAAATCCTTATTACATCTACTAGAAAAAGATGTGCAGGGTTTCTATGATCAGGATATTTATGATGGGGGTCTTCATCTTGAATTTGGGTTGATGTATCCAGGTAGTGAAATTCCAGAATGGTTTAGTAATCAAACTGAGGGCAACACTGTAACCCTCCAACTTCCTCCACATTGTATAGATAACACTTTGGTGTTTGCTTCTTGTCTTATCGTTTCTCCCGATGAGGACTTATATCATGATGTTACAGCGACGAACTAG MSFKTLLRGVSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPDEDLYHDVTATN Homology
BLAST of PI0024911 vs. ExPASy Swiss-Prot
Match: F4JT80 (Disease resistance protein RPP2B OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 34/108 (31.48%), Postives = 54/108 (50.00%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04 Identity = 30/106 (28.30%), Postives = 47/106 (44.34%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy TrEMBL
Match: V4T575 (TIR domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018611mg PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy TrEMBL
Match: A0A2H5QIV9 (TIR domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_234460 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy TrEMBL
Match: A0A2H5QIV8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_234460 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy TrEMBL
Match: A0A067DJ08 (TIR domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g000922mg PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07 Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of PI0024911 vs. ExPASy TrEMBL
Match: V4VR12 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022023mg PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07 Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of PI0024911 vs. NCBI nr
Match: XP_006477663.1 (disease resistance-like protein DSC1 [Citrus sinensis]) HSP 1 Score: 72.4 bits (176), Expect = 3.0e-09 Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of PI0024911 vs. NCBI nr
Match: XP_024044089.1 (disease resistance-like protein DSC1 isoform X2 [Citrus clementina]) HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. NCBI nr
Match: XP_024044090.1 (TMV resistance protein N isoform X3 [Citrus clementina]) HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. NCBI nr
Match: GAY64558.1 (hypothetical protein CUMW_234460 [Citrus unshiu]) HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. NCBI nr
Match: GAY64559.1 (hypothetical protein CUMW_234460 [Citrus unshiu]) HSP 1 Score: 72.0 bits (175), Expect = 3.9e-09 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0024911 vs. TAIR 10
Match: AT4G36150.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 32/97 (32.99%), Postives = 48/97 (49.48%), Query Frame = 0
BLAST of PI0024911 vs. TAIR 10
Match: AT4G19510.1 (Disease resistance protein (TIR-NBS-LRR class) ) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 34/108 (31.48%), Postives = 54/108 (50.00%), Query Frame = 0
BLAST of PI0024911 vs. TAIR 10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 46.2 bits (108), Expect = 2.1e-05 Identity = 30/106 (28.30%), Postives = 47/106 (44.34%), Query Frame = 0
BLAST of PI0024911 vs. TAIR 10
Match: AT3G51570.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 45.1 bits (105), Expect = 4.7e-05 Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of PI0024911 vs. TAIR 10
Match: AT4G19470.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04 Identity = 29/104 (27.88%), Postives = 51/104 (49.04%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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