PI0024817 (gene) Melon (PI 482460) v1

Overview
NamePI0024817
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPlant transposase
Locationchr10: 13708225 .. 13710365 (+)
RNA-Seq ExpressionPI0024817
SyntenyPI0024817
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGCTATGGAGAGCAAGTAAATCTCGACTAGTGAGCAAGATTGGGGAAGCCTTGAATGAGGAAGAGTTGAACAAACTCAAGCCGGATAACATTTCTTCAATGCATGATTGGAATGACTTCATCAAACATAAGACCAGTGCAATATTCAAGGTATGTTCGTAGTATGAAAGTTGATTAAATTAATTTCTTTGCTTGAAGGTTTAGTCTTACTAAGTATGATTTTCAGGCAAAGAGCAAGAAGTTTAAAGAAATGAAGATGAAGCAACTTCCTCACACGTGTAGTCGTAGAGGCTATGCTCGACTAGCTGAAGATTTGGTATAAATTTATGTAATTTGAAACATTGTTACATTTAGCACATATAGCGAATATATACAACTAAGTACATTGTGTTTTAATGTAGAAAAACTCTTCTTCTTCAACTCCGATTACCTGAGTAAATGTTTGGACAAAGGCGCATGTGAAGAAAGATGGAAAACCTATTAACTCTCAAGTGGCCGACACTCTGGTTATGGTTTTTCTTTCGTATTCTTTCTTTTATGTTTTTATTTTGTATACTTATTGAGTTAAGGGTGCATTGTTTGGCATTTCTGGAAATATAATGCAAGGTTCTTTTTATTTTTTATTCTTTCTGATAAAATAAATTCTGTTTGGTTTAGAAGCAGTGACATTTGTAAGTTTTAGAAGGATTTCTGATGGGTTTTTTACTTGCTGGTAGTTGCTGGATTTTAGAAGCAATTCTGTTCTTAGGTTGGCTAATTATTTTGGCTTCAATGATATGATTGATTTCGCTTGTTACCAGTTGAGTTGTGAGATTTAGTTGTAGTTTTTTGTTGTTTGCTTTGCTGGAATTTTAGTTAATGCAGGGTTTCTTTAACGTTGAATATCTTGTTAATTAGGTTGTCGAAAGTTCTCTACGATGCTATGATTAAGGAATGCCCCCCTCATCTACTGTTTAGTTGCTGGATTTTGTAGTTCCATTGACGCTAATGAGCATTGGTTTTGATTAGACTGTACTTGTTAGGCTTCGTAGTCGCTTGTTTGGTTTAAAAATTGTGACATTTGTAAGTTTTAGAAGGATTTCTATTGGGTTTTTTACTTGCTGGTGGTTGCTGGATTTTAGAAGCAATTCTGTTCTTAGGTTGGCTAATTATTTTGGCTTCAATGATATGCCCCCCCTACCCCATATTTTTTCATGACCAATCTTTCTTTACTTATTTTTTTGGTTAGGAGCGTATTGAACAAAATCGTGCGGGAATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGACCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTACATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGTAAATTTGTGATCCTAACACTCTTAAAAGTTTTGAAACTATGTTTTATCGAACATTTTGACATTGTTGTTTCTATAGGAAAAAATAAGTGATCAACAAAATTCTAATAATTCTGTTAGAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGGTAAATTCATTTAGAACTTTTTTGTTAATTCATTATTTGAAATTATTACTTTTTGAGATTTTTCTAACCATATTATTGTTGAAAAAGAGTGTTACTATCAACACTCCCGGCCATAAGTGTTTGTTGCTAGATTGGGTTGGTTCAGGAGAAGTCATTGTTGAAGGTAGATGGTCTTCCAGTGATCCATCAATTCTTGTCCACCATGTACCTCTTGGCCCAAATGCAGTTTGTGTGTGGGTTGATGCAGTGAAAATATCAAATTCCTTCTTATGGAGGCCTACCTCTGATATTGTTGTTATTGACGATGCTGTGGGCACTACTGTAGCATGGCCAATTGATAAAGTCAAACTATGTAAGAAATTTAATTTACTTTGTGAATTAGGTTATTTATTTATTTCATTAACTAATTTATTGTTAGAGTTAGATAATAATATTTCTTTTTATTTTTTATTAGGTGATTGATACAGGAAAGAACATTGACGAAATCTCCTAG

mRNA sequence

ATGGGTGGGCTATGGAGAGCAAGTAAATCTCGACTAGTGAGCAAGATTGGGGAAGCCTTGAATGAGGAAGAGTTGAACAAACTCAAGCCGGATAACATTTCTTCAATGCATGATTGGAATGACTTCATCAAACATAAGACCAGTGCAATATTCAAGGAGCGTATTGAACAAAATCGTGCGGGAATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGACCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTACATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGATCAACAAAATTCTAATAATTCTGTTAGAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGATACAGGAAAGAACATTGACGAAATCTCCTAG

Coding sequence (CDS)

ATGGGTGGGCTATGGAGAGCAAGTAAATCTCGACTAGTGAGCAAGATTGGGGAAGCCTTGAATGAGGAAGAGTTGAACAAACTCAAGCCGGATAACATTTCTTCAATGCATGATTGGAATGACTTCATCAAACATAAGACCAGTGCAATATTCAAGGAGCGTATTGAACAAAATCGTGCGGGAATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGACCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTACATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGATCAACAAAATTCTAATAATTCTGTTAGAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGATACAGGAAAGAACATTGACGAAATCTCCTAG

Protein sequence

MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFKERIEQNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSNVDELKSVVASLLKDKEKISDQQNSNNSVRVPTSPHIPTPILNSPQVIDTGKNIDEIS
Homology
BLAST of PI0024817 vs. ExPASy TrEMBL
Match: A0A5D3DH39 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001040 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.8e-54
Identity = 128/206 (62.14%), Postives = 142/206 (68.93%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRA KSRLVSKIGEA N+EELNKLKPD ISSMHDWNDFIKHKTSA FK        
Sbjct: 1   MGGLWRARKSRLVSKIGEASNDEELNKLKPDKISSMHDWNDFIKHKTSATFKKHSSSTPI 60

Query: 61  --------------------------ERIEQNRAGMSSSSSMIEDAISRVFGPDHGYVRG 120
                                     ERI+QN   ++SSSS+I+DAISRV GPD GYVRG
Sbjct: 61  TRVDVWTKTHVKKDGTPMNSQVADTLERIKQN--CVASSSSIIDDAISRVLGPDQGYVRG 120

Query: 121 LGFGVTTSKVFTSIQKDKTIACLERKCNNLTSNVDELKSVVASLLKDKEKISDQQNSNNS 169
           LGFGV  SKV TSI KDKTI  LERKC+NLTS+VDELKSVVAS LKDKEK SD  +++  
Sbjct: 121 LGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVDELKSVVASSLKDKEKTSDDNSNHLV 180

BLAST of PI0024817 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53
Identity = 132/236 (55.93%), Postives = 147/236 (62.29%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EELNKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTPITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR  ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--VASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 7.0e-53
Identity = 131/236 (55.51%), Postives = 146/236 (61.86%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIG+A N+EELNKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKAKSKTFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTLITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR   +SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--RASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52
Identity = 130/236 (55.08%), Postives = 145/236 (61.44%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EE NKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEEFNKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTSITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR  ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--VASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.9e-43
Identity = 111/198 (56.06%), Postives = 120/198 (60.61%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EEL+KLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSHRGYARLAEDLKKSSSTPITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 135
           QNR   +SSSS+I+DAISRV GPD  YVRGLGF VT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNRG--ASSSSIIDDAISRVLGPDQAYVRGLGFDVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. NCBI nr
Match: TYK22660.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 1.0e-53
Identity = 128/206 (62.14%), Postives = 142/206 (68.93%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRA KSRLVSKIGEA N+EELNKLKPD ISSMHDWNDFIKHKTSA FK        
Sbjct: 1   MGGLWRARKSRLVSKIGEASNDEELNKLKPDKISSMHDWNDFIKHKTSATFKKHSSSTPI 60

Query: 61  --------------------------ERIEQNRAGMSSSSSMIEDAISRVFGPDHGYVRG 120
                                     ERI+QN   ++SSSS+I+DAISRV GPD GYVRG
Sbjct: 61  TRVDVWTKTHVKKDGTPMNSQVADTLERIKQN--CVASSSSIIDDAISRVLGPDQGYVRG 120

Query: 121 LGFGVTTSKVFTSIQKDKTIACLERKCNNLTSNVDELKSVVASLLKDKEKISDQQNSNNS 169
           LGFGV  SKV TSI KDKTI  LERKC+NLTS+VDELKSVVAS LKDKEK SD  +++  
Sbjct: 121 LGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVDELKSVVASSLKDKEKTSDDNSNHLV 180

BLAST of PI0024817 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 218.4 bits (555), Expect = 4.9e-53
Identity = 132/236 (55.93%), Postives = 147/236 (62.29%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EELNKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTPITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR  ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--VASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 131/236 (55.51%), Postives = 146/236 (61.86%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIG+A N+EELNKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKAKSKTFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTLITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR   +SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--RASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 4.2e-52
Identity = 130/236 (55.08%), Postives = 145/236 (61.44%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EE NKLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEEFNKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSRRGYARLAEDLKKSSSTSITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 169
           QNR  ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNR--VASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNL 374

BLAST of PI0024817 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 6.1e-43
Identity = 111/198 (56.06%), Postives = 120/198 (60.61%), Query Frame = 0

Query: 1   MGGLWRASKSRLVSKIGEALNEEELNKLKPDNISSMHDWNDFIKHKTSAIFK-------- 60
           MGGLWRASKSRLVSKIGEA N+EEL+KLKPDNISSMHDWNDFIKHKTSA FK        
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIKHKTSATFKAKSKKFKD 254

Query: 61  --------------------------------------------------------ERIE 120
                                                                   +RIE
Sbjct: 255 MKQKQLPHTCSHRGYARLAEDLKKSSSTPITRVDVWTKAHVKKDGTPMNSQVADTLDRIE 314

Query: 121 QNRAGMSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNL 135
           QNR   +SSSS+I+DAISRV GPD  YVRGLGF VT SKV TSIQKDKTI  LE+KC+NL
Sbjct: 315 QNRG--ASSSSIIDDAISRVLGPDQAYVRGLGFDVTLSKVSTSIQKDKTITSLEKKCDNL 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DH394.8e-5462.14Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00... [more]
A0A5A7SRN72.4e-5355.93Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... [more]
A0A5A7TLJ27.0e-5355.51Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... [more]
A0A5A7UVF22.0e-5255.08Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00... [more]
A0A5A7UBP22.9e-4356.06Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... [more]
Match NameE-valueIdentityDescription
TYK22660.11.0e-5362.14Plant transposase [Cucumis melo var. makuwa][more]
KAA0032201.14.9e-5355.93Plant transposase [Cucumis melo var. makuwa][more]
KAA0042856.11.4e-5255.51Plant transposase [Cucumis melo var. makuwa][more]
KAA0057491.14.2e-5255.08Plant transposase [Cucumis melo var. makuwa][more]
KAA0051001.16.1e-4356.06Plant transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024817.1PI0024817.1mRNA