PI0024718 (gene) Melon (PI 482460) v1

Overview
NamePI0024718
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionWAT1-related protein
Locationchr05: 9381285 .. 9381670 (-)
RNA-Seq ExpressionPI0024718
SyntenyPI0024718
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACTCAGCAGGGAGGAGAATGTGCAATGGGTTGCATGATGCTAAACCTGTGTTTCTTATGGCTTTGGTTCAATCGGTTTTTGCTGGAGTTAATGTTCTCTACAAATTAGCTGTTAATGATTGAATGAATTTGATGATCCTCATTGCTTTTCGTTTCTTGTTTGCATCTCTTTTCATGCTTCCTCTTGCCTTCTTTCTCGAAAGGTTATCTATTTATTTATTTTTTTAAATTTCTTCTTCTTCTTCGGTTTATGGAAAAGGATATATATATCGGTTATATATTTATAATGTGAGTATCTGAACTTTAATTACAGAAATAAAAGACCCAAGATGACATGGTCCATTCTCTTCTATGGATTTTTTTGTGGATTATTTGGGTAA

mRNA sequence

ATGGAGTACTCAGCAGGGAGGAGAATGTGCAATGGGTTGCATGATGCTAAACCTGTGTTTCTTATGGCTTTGGTTCAATCGGTTTTTGCTGGAGTTAATGTTCTCTACAAATTAGCTTATCTGAACTTTAATTACAGAAATAAAAGACCCAAGATGACATGGTCCATTCTCTTCTATGGATTTTTTTGTGGATTATTTGGGTAA

Coding sequence (CDS)

ATGGAGTACTCAGCAGGGAGGAGAATGTGCAATGGGTTGCATGATGCTAAACCTGTGTTTCTTATGGCTTTGGTTCAATCGGTTTTTGCTGGAGTTAATGTTCTCTACAAATTAGCTTATCTGAACTTTAATTACAGAAATAAAAGACCCAAGATGACATGGTCCATTCTCTTCTATGGATTTTTTTGTGGATTATTTGGGTAA

Protein sequence

MEYSAGRRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLAYLNFNYRNKRPKMTWSILFYGFFCGLFG
Homology
BLAST of PI0024718 vs. ExPASy TrEMBL
Match: A0A0A0LNI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G151070 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-21
Identity = 58/91 (63.74%), Postives = 61/91 (67.03%), Query Frame = 0

Query: 1  MEYSAGRRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLAYLN------------------ 60
          MEYSAGRR+CNGLHDAKPVFLMAL QSV+AGVNVLYKLA  +                  
Sbjct: 1  MEYSAGRRICNGLHDAKPVFLMALTQSVYAGVNVLYKLAINDGMNLMILIAFRFLFASLF 60

Query: 61 ------FNYRNKRPKMTWSILFYGFFCGLFG 68
                F  R KRPKMTWSILFYGFFCGLFG
Sbjct: 61 MLPLAFFLERKKRPKMTWSILFYGFFCGLFG 91

BLAST of PI0024718 vs. ExPASy TrEMBL
Match: A0A6A6L3L3 (WAT1-related protein OS=Hevea brasiliensis OX=3981 GN=GH714_035402 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 13 LHDAKPVFLMALVQSVFAGVNVLYKLA-YLNFNYRNKRPKMTWSILFYGFFCGLFG 68
          LH+ KPV LM +VQ  FAGVNV YKLA Y   + R  RPK+TW+ILF  F CG FG
Sbjct: 15 LHELKPVLLMVVVQFCFAGVNVFYKLATYDGMSLRKSRPKLTWTILFQAFLCGFFG 70

BLAST of PI0024718 vs. ExPASy TrEMBL
Match: A0A2I0IQQ1 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_033640 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0

Query: 5  AGRRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLA---YLNFNYRNKRPKMTWSILFYGF 64
          A +R CN +H  K   +M +VQ+ FAGVN+LYKL     L F  +N RPK+TW +L   F
Sbjct: 2  AMQRFCNAMHGMKAPLIMVVVQTAFAGVNILYKLVANDALIFERKN-RPKLTWKVLVQAF 61

Query: 65 FCGLFG 68
          FCGLFG
Sbjct: 62 FCGLFG 66

BLAST of PI0024718 vs. ExPASy TrEMBL
Match: A0A6S7PN71 (WAT1-related protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS42698 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 38/84 (45.24%), Postives = 45/84 (53.57%), Query Frame = 0

Query: 8  RMCNGLHDAKPVFLMALVQSVFAGVNVLYKLA---------YLNFNY------------- 67
          ++CN +HD KPV LM  VQ  FAGVNVLYKLA          + + +             
Sbjct: 6  KICNVIHDLKPVLLMVTVQMTFAGVNVLYKLAANDGMNLPILVAYRFIFSTAFIVPLALL 65

BLAST of PI0024718 vs. ExPASy TrEMBL
Match: A0A1S3C690 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103496933 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 39/70 (55.71%), Postives = 41/70 (58.57%), Query Frame = 0

Query: 22 MALVQSVFAGVNVLYKLAYLN------------------------FNYRNKRPKMTWSIL 68
          MALVQSV+AGVNVLYKLA  +                        F  RNKRPKMTWS L
Sbjct: 1  MALVQSVYAGVNVLYKLAVNDGMNLMILIAFRFLFASLFMLPLAFFLERNKRPKMTWSFL 60

BLAST of PI0024718 vs. NCBI nr
Match: XP_038875637.1 (WAT1-related protein At1g25270-like [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14
Identity = 48/87 (55.17%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 5  AGRRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLAYLN---------------------- 64
          +G R+CN LH AKP  LMALVQS++AGVNVLYKLA  +                      
Sbjct: 3  SGWRICNSLHAAKPAILMALVQSIYAGVNVLYKLAVNDGMNLMILIAFRFIFASIFMLPL 62

Query: 65 --FNYRNKRPKMTWSILFYGFFCGLFG 68
            F  RNKRPKMTWSILFYGF CGLFG
Sbjct: 63 AFFLERNKRPKMTWSILFYGFLCGLFG 89

BLAST of PI0024718 vs. NCBI nr
Match: KAE8651785.1 (hypothetical protein Csa_006410 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 4.0e-11
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 1  MEYSAGRRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLA 40
          MEYSAGRR+CNGLHDAKPVFLMAL QSV+AGVNVLYKLA
Sbjct: 1  MEYSAGRRICNGLHDAKPVFLMALTQSVYAGVNVLYKLA 39

BLAST of PI0024718 vs. NCBI nr
Match: KAG6579710.1 (WAT1-related protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 3.7e-09
Identity = 47/91 (51.65%), Postives = 50/91 (54.95%), Query Frame = 0

Query: 4   SAGRRMC-NGLH--DAKPVFLMALVQSVFAGVNVLYKLAYLN------------------ 63
           S+G  +C NG     AKP  LM LVQSVFAGVNVLYKLA  +                  
Sbjct: 17  SSGTTICTNGAFHATAKPALLMLLVQSVFAGVNVLYKLAVNDGMNLMIMIAFRFVFASLF 76

Query: 64  ------FNYRNKRPKMTWSILFYGFFCGLFG 68
                 F  RNKRPKMT SILFYGF CGLFG
Sbjct: 77  MLPLAFFLERNKRPKMTCSILFYGFLCGLFG 107

BLAST of PI0024718 vs. NCBI nr
Match: KAF2295960.1 (hypothetical protein GH714_035402 [Hevea brasiliensis])

HSP 1 Score: 70.1 bits (170), Expect = 8.3e-09
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 13 LHDAKPVFLMALVQSVFAGVNVLYKLA-YLNFNYRNKRPKMTWSILFYGFFCGLFG 68
          LH+ KPV LM +VQ  FAGVNV YKLA Y   + R  RPK+TW+ILF  F CG FG
Sbjct: 15 LHELKPVLLMVVVQFCFAGVNVFYKLATYDGMSLRKSRPKLTWTILFQAFLCGFFG 70

BLAST of PI0024718 vs. NCBI nr
Match: XP_042495831.1 (WAT1-related protein At1g25270-like [Macadamia integrifolia])

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 0

Query: 7  RRMCNGLHDAKPVFLMALVQSVFAGVNVLYKLAYLN------------------------ 66
          R +CN LH  KP+ +M +VQ VFAGVNV YKLA ++                        
Sbjct: 3  RNLCNFLHGLKPMMMMVVVQIVFAGVNVFYKLATMDGMNLHILIAYRYIFASIFLAPLAF 62

Query: 67 FNYRNKRPKMTWSILFYGFFCGLFG 68
          F  RN RPK+TW ++F  F CGLFG
Sbjct: 63 FVERNSRPKLTWMVIFQAFLCGLFG 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LNI56.0e-2163.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G151070 PE=4 SV=1[more]
A0A6A6L3L34.0e-0960.71WAT1-related protein OS=Hevea brasiliensis OX=3981 GN=GH714_035402 PE=3 SV=1[more]
A0A2I0IQQ11.5e-0851.52Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_033640 PE=4 SV=1[more]
A0A6S7PN712.0e-0845.24WAT1-related protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS42698 PE=3 SV=1[more]
A0A1S3C6902.0e-0855.71WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103496933 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038875637.12.2e-1455.17WAT1-related protein At1g25270-like [Benincasa hispida][more]
KAE8651785.14.0e-1192.31hypothetical protein Csa_006410 [Cucumis sativus][more]
KAG6579710.13.7e-0951.65WAT1-related protein, partial [Cucurbita argyrosperma subsp. sororia][more]
KAF2295960.18.3e-0960.71hypothetical protein GH714_035402 [Hevea brasiliensis][more]
XP_042495831.11.4e-0842.35WAT1-related protein At1g25270-like [Macadamia integrifolia][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024718.1PI0024718.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane