PI0024647 (gene) Melon (PI 482460) v1

Overview
NamePI0024647
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 4655778 .. 4655963 (+)
RNA-Seq ExpressionPI0024647
SyntenyPI0024647
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTAAACGAGGAGGCATCGAGGAAGACGACGGGGTGGGTATTGAGCCGAAAGAGGAACCTTCCATTCAGCAACACCACCATGGCTATTGCTGGAACTCTCCTCCTCGGAATCGGCTACATGGTCTATGTTAACAAATCCAGAAATAATAATGATAATATTCACCGCCAACCTAGTCGCTGA

mRNA sequence

ATGGGATTAAACGAGGAGGCATCGAGGAAGACGACGGGGTGGGTATTGAGCCGAAAGAGGAACCTTCCATTCAGCAACACCACCATGGCTATTGCTGGAACTCTCCTCCTCGGAATCGGCTACATGGTCTATGTTAACAAATCCAGAAATAATAATGATAATATTCACCGCCAACCTAGTCGCTGA

Coding sequence (CDS)

ATGGGATTAAACGAGGAGGCATCGAGGAAGACGACGGGGTGGGTATTGAGCCGAAAGAGGAACCTTCCATTCAGCAACACCACCATGGCTATTGCTGGAACTCTCCTCCTCGGAATCGGCTACATGGTCTATGTTAACAAATCCAGAAATAATAATGATAATATTCACCGCCAACCTAGTCGCTGA

Protein sequence

MGLNEEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDNIHRQPSR
Homology
[Close]
BLAST of PI0024647 vs. ExPASy TrEMBL
Match: A0A0A0LSP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MGLNEEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDNIHRQPS 60
          MG+N+EASRKTTGWVLSRKRNLPFSNTT+AIAGTLLLGIGYMVYVNKS+NNNDNIHRQPS
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKNNNDNIHRQPS 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of PI0024647 vs. ExPASy TrEMBL
Match: A0A5A7VG71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001980 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MGLN-EEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDNIHRQP 60
          MGLN +EASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNND IHRQP
Sbjct: 1  MGLNDQEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDTIHRQP 60

Query: 61 SR 62
          +R
Sbjct: 61 TR 62

[Close]
BLAST of PI0024647 vs. NCBI nr
Match: KGN62996.1 (hypothetical protein Csa_021855 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MGLNEEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDNIHRQPS 60
          MG+N+EASRKTTGWVLSRKRNLPFSNTT+AIAGTLLLGIGYMVYVNKS+NNNDNIHRQPS
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKNNNDNIHRQPS 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of PI0024647 vs. NCBI nr
Match: KAA0064885.1 (hypothetical protein E6C27_scaffold82G001980 [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 7.0e-23
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MGLN-EEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDNIHRQP 60
          MGLN +EASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNND IHRQP
Sbjct: 1  MGLNDQEASRKTTGWVLSRKRNLPFSNTTMAIAGTLLLGIGYMVYVNKSRNNNDTIHRQP 60

Query: 61 SR 62
          +R
Sbjct: 61 TR 62

The following BLAST results are available for this feature:
BLAST of PI0024647 vs.
Match NameE-valueIdentityDescription
BLAST of PI0024647 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSP01.8e-2493.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1[more]
A0A5A7VG713.4e-2393.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of PI0024647 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62996.13.7e-2493.44hypothetical protein Csa_021855 [Cucumis sativus][more]
KAA0064885.17.0e-2393.55hypothetical protein E6C27_scaffold82G001980 [Cucumis melo var. makuwa][more]
BLAST of PI0024647 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024647.1PI0024647.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane