PI0024616 (gene) Melon (PI 482460) v1

Overview


Name	PI0024616
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	40S ribosomal protein S25
Location	chr03: 7725707 .. 7727914 (-)
RNA-Seq Expression	PI0024616
Synteny	PI0024616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCCGAAGCCCTTGGAACCCCTTCACTCAAACCCTAGAAACCAAATCTCATGGTGAGTTCCCTTCCTCTTTTGTTAATTCGAATAATTTGTTCTTCCTTTTGATTCTTGTTTCGTTTTTGGAACTTCCGATGATGTGATATCTTTTGTTGTCATCGTTTTGAATCTTAGGCGCCGAAGAAGGACAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGGTAAGCTTCCAAAATTTAAGTTCTGCTAGCTGTTTTATTATTAGTATGCCGATATTTGCTTAATCTCATCGTTCAAGATCGTTAGATTAGATGTAGTTTTAATTTCCTCTGGTATTACTACATTGCTAGCATTAAGTGCTCTTTCTGAAGTTAGTATCGTTGTATTTTATTTCGATACTGTAATTTGGAATTATCTTTTGTAATTTGGCATTATCTTTTGTAATTTGATCTTCTTACGTCGTGTAGGATATCATTTTTCGTCATACTGATAATGAGATAGTGACGTTTATATTTGATTAGAATTAGAATGAATGGACGATAAAAATCAGTTAGGATACGACCCAAGACCTTGAAAAATACAATGAGATTTTTGAAAGTTGGTGAAGTTTGTTGGGTGAGAGGAAGAGTTTGCTTTTCGGTATTTGTTGTAATATGGCCATTCTTGTTATTTTACATGGTGATTATCACTTGGTTTGCAGAAGTGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGGTATGTCTTTTTTTTTCCCTCTTTCTATCCGTCCATTCCGCAATTTTATTGTTCTTGGTTAGAATATTGTAAAGAAGTTTAGATTTGTCCAAACCTAACAAAATGAGTTTTGAAACGTAATGGTGATTGGACTCGTGGTTCCTGGGCGGGATCAACCTTTCCTAGGGTTGATAATTAATTAAAAAACCCCACCCATTTAAGTCTACTGATGACCATGAAATTTATGGTCAAGCCCCCTTGAAAATTAAGCCAATAAACATCCCTTCTACTTCTAAATTTCTTTGCTTTGTTATCTACTTTATACCTTTATTTTGGAAAACCAAGTGAAGTTTTGAAAACTAGAAAAAGTAGTTTGTACAAATCTGCTTTTGTTTTTGGCAAGGTGGCTAAGAATTAACACTTTTACTTAAGATGACTGGGTTATCTTAAGAAACTAAGAGGAAACAAACACGAGTTTTTAAATTCAAAAACAAAAATCTAAGGCCCAGTTTGCTAACATTTTGTTTTTGGTCTTTGAAAATGAAGCCTATTTCATCTAAGTTCTTTCAACAATTTGCATATTTCTTAAGTGAAAATTTGAATTCTTTGCCAAATTTTAAACCAAACCAATTATTCTTTAAAAAACAACTTTTTTAAGTTTTCAAGTTTTGGCTTTGTTTTTTAAACATTGGTATCAAACAAGTGTTTATCGGCCTAAGAAAGCAAGGAATTTAGATGTGGAATATAGGCTTAATTTTCAAAAACTGGAATTTAGATGAGGTATGAGTGTTTATAGGCTTCATTTTCAAAAAACTAAAAACTAAATAGGGTTGTAAAGTCCTAAATGGTTTACCAAATGACCGACTGACCTGTTTTGTGTTCAAACTTTTTGATTCACTGTTACTGATAACACCACATTCTTTGGCAATTTACTAATGGTTCCCTTTGTCGTCATGTGCAACAATCAGATCAATGGATCACTAGCACGAAGAGCAATTAAGGATTTGATGGCACGAGGTTCCATCAGAATGATATCTGCTCACTCGAGTCAGCAGATCTACACAAGAGCAACCAACACTTAAAGGACAACAATTCATTTCACTTTATACCCGAAAGGGTACATAACAGATATGTAGTTGCCTTTCCATTTTGCAATTCCAAATTTTGTTGAGTGATCAAATTATCATTTTAGTTTGTTACAACGGCGGAATGAACTCTAAATGTGACGTTTTTAATTTGTTAATGAACTTATTTGATGAATTGTCACATTTTCTGTTATCTACCTTTTCTCTTTCCTACTGCTAAGTACTAATCATAATGTGTGTATGTAGAATCTCGTTTTAGATGAAAGTTGGTAAACTAATGTGGC

mRNA sequence

CCAGCCGAAGCCCTTGGAACCCCTTCACTCAAACCCTAGAAACCAAATCTCATGGCGCCGAAGAAGGACAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAGTGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCACTAGCACGAAGAGCAATTAAGGATTTGATGGCACGAGGTTCCATCAGAATGATATCTGCTCACTCGAGTCAGCAGATCTACACAAGAGCAACCAACACTTAAAGGACAACAATTCATTTCACTTTATACCCGAAAGGGTACATAACAGATATGTAGTTGCCTTTCCATTTTGCAATTCCAAATTTTGTTGAGTGATCAAATTATCATTTTAGTTTGTTACAACGGCGGAATGAACTCTAAATGTGACGTTTTTAATTTGTTAATGAACTTATTTGATGAATTGTCACATTTTCTGTTATCTACCTTTTCTCTTTCCTACTGCTAAGTACTAATCATAATGTGTGTATGTAGAATCTCGTTTTAGATGAAAGTTGGTAAACTAATGTGGC

Coding sequence (CDS)

ATGGCGCCGAAGAAGGACAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAGTGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCACTAGCACGAAGAGCAATTAAGGATTTGATGGCACGAGGTTCCATCAGAATGATATCTGCTCACTCGAGTCAGCAGATCTACACAAGAGCAACCAACACTTAA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT

Homology

[Close]

BLAST of PI0024616 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-47
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-46
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of PI0024616 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-46
Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 178.3 bits (451), Expect = 4.6e-44
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRAT 107
           +TPSILSDRLRINGSLAR+AI+DLM +G+IRM+S HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of PI0024616 vs. ExPASy TrEMBL
Match: A0A5D3CKR9 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00850 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy TrEMBL
Match: A0A6J1BYI5 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy TrEMBL
Match: A0A1S3C4W3 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy TrEMBL
Match: A0A0A0KB40 (40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. ExPASy TrEMBL
Match: A0A6J1GMB9 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]

BLAST of PI0024616 vs. NCBI nr
Match: XP_008456601.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S ribosomal protein S25-2-like [Momordica charantia] >TYK11764.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 2.9e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. NCBI nr
Match: XP_004140903.1 (40S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein Csa_005769 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. NCBI nr
Match: XP_038885543.1 (40S ribosomal protein S25 [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAH SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHPSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. NCBI nr
Match: XP_022953196.1 (40S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal protein S25-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533042.1 40S ribosomal protein S25-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6602255.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]

BLAST of PI0024616 vs. NCBI nr
Match: XP_021897361.1 (40S ribosomal protein S25 [Carica papaya])

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRI+GSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRISGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-48
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-47
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of PI0024616 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 3.5e-47
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of PI0024616 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

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BLAST of PI0024616 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-45
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:

BLAST of PI0024616 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIK2	4.4e-47	89.81	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
Q8GYL5	3.7e-46	89.72	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
P46301	3.7e-46	88.89	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]
Q9T029	4.9e-46	87.96	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
Q9SIW5	4.6e-44	86.79	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]

BLAST of PI0024616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKR9	1.4e-48	100.00	40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1BYI5	1.4e-48	100.00	40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV...	[more]
A0A1S3C4W3	1.4e-48	100.00	40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1	[more]
A0A0A0KB40	3.2e-48	98.15	40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1	[more]
A0A6J1GMB9	7.1e-48	97.22	40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=...	[more]

BLAST of PI0024616 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456601.1	2.9e-48	100.00	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S r...	[more]
XP_004140903.1	6.5e-48	98.15	40S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein C...	[more]
XP_038885543.1	1.1e-47	99.07	40S ribosomal protein S25 [Benincasa hispida]	[more]
XP_022953196.1	1.5e-47	97.22	40S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal p...	[more]
XP_021897361.1	2.5e-47	98.15	40S ribosomal protein S25 [Carica papaya]	[more]

BLAST of PI0024616 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21580.1	3.1e-48	89.81	Ribosomal protein S25 family protein	[more]
AT4G34555.1	2.7e-47	89.72	Ribosomal protein S25 family protein	[more]
AT4G39200.1	3.5e-47	87.96	Ribosomal protein S25 family protein	[more]
AT2G21580.2	2.2e-46	88.89	Ribosomal protein S25 family protein	[more]
AT4G39200.2	2.5e-45	87.04	Ribosomal protein S25 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.63.20		coord: 21..108 e-value: 3.0E-41 score: 141.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR12850:SF31	BNAA04G12260D PROTEIN	coord: 2..108
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 7..105 e-value: 6.1E-42 score: 141.9
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	40S RIBOSOMAL PROTEIN S25	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024616.1	PI0024616.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome