PI0024497 (gene) Melon (PI 482460) v1

Overview


Name	PI0024497
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	phosphoglucan phosphatase LSF2, chloroplastic
Location	chr10: 13437522 .. 13444656 (+)
RNA-Seq Expression	PI0024497
Synteny	PI0024497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGAGTTGTGGAAGTTATTTTCACGTGGAAGGTCGGCGGATTTGCTCCTCAAGCTCCCAAGTTTCTTTATTCCATTCAATTTCATCGCACAAATTTTGATTACTTCGGTTGTTATTTGCGGTTTTTCATCTCAAGAAGAAAATGGGAGCTGCCAATCTCCCGTGTTTTTCATCGCTATATCGAGTTTTTCCACTTCAAAACAATGCTCCCAACAAATTTTTACCATTTTCTTCAATTCTTTCAAAACCCCTTTACCGATTGAACAGGATTTGCTGCGGAGTACCCGAGAGTGGAATTCAGCAAAACCCCTCAACTTCCAGACCTTCCTCTTCCAAGAACAGGATGGAAGAGTACAATTTAGCTATGAAGAAGATGATGAGGAACCCTTATGAGTATCACCATGAACTGGGTCAGTTTCTTCTTTTTCTTTTAATGTTTTAATGCAACACCATTTTGTATGTTTCAATGCTTCAATCGCTCTGCTTCTGCAAATTTGATAACGGGTAATTTTGGGGCAATTTGTATTATTTGAAATGAGAAATGAATGGATCGTATTGAAGTGCTTTTGTGATTTTCTGGTATGAGATGTGCACCGTTGGGCTTTCTGTGTGGACTTTTTGATGATTTATGGTAGCTTTTTGCTGAAGTTAATAAAAGCTAGTGGTGGTTCGAGTAATTAATTAGAGGGTCTAGAGTTTTATTGGCATACTAACATTGATAACATCTTTGAATTATGAGTATGACGGGCGTGAGAGGCACTCGGTCCTCCAGATTTTCGATATAACATCTTTGAGTTGTTTGATAAGTCTAAAAAATTGTGGGTCATCTCTTTTTGTTTGGATGAAAGAGTTTCAGGTTATGAAATCTCATATTGAAAGCAGTTTTACTGGCCACCAAGGTCCTGTTTGGTTCCATTTTAGGAGATAAGTCAACGGAGAACAACTATTTTGTTGTAAAATTCCAATAAAATGTACATAATAGAATATGATCTCATAAAATTCCAGGACTTTGTATTGTTTACGGGTGGGAGGGAGGGAGAGAAAGGGAAGATACTTTAACAGATAAACCTTTGCTGAGAGAACACAGGGTTTTATCTTTCAGGAAAACTTCTGTTTTCATCTGCAAACAAAGAGAAGACTGAAAGAATGATTATAAATTTTGGCTTAAATAGATTAAAGTCATCTTTTGTGCTTTAATGTTTTTGAAATTCATTTTCTAGTTCATATTTGGCAAAACATAAATTTTTTGTGCTCGTGGCATGTAGCTTAAATACGTAAAATGATGAACATATTTGTTAAAATGTACTTATTCCAACGTGAAGTGATATCAGTTTTCTGAAAACTGATGTATAGTCATAATGCTCCTCCAATCAGGTATGAACTATACTGTGATAGCTGACAATTTGATTGTCGGTTCCCAGCCTCAAAAACCTGAAGATATCAATTTCCTGAAAGAGGAAGAAGGTGTTGCCTATATTCTGAATTTACAGCAGGACAAGGATGTTGAGTACTGGGGAATCGACTTACAATCAATTATAGAAAGATGTAAAGAACTTGGAATTCGTCATATGAGGCAACCGGTAAGCACGATTCGTTTTAATAACAATGTGGGATTAAATCTTTAGCAGAGCCATTTTCAAATACACTGTGTTCTCTCTCTTTTATCTTTTCCTTGTCCTATCTTTTAACTGTTTTATAGCCTTTGTTGTAGTTGGAGCCAATATGAAAGAACTCCTTAATGCATTCTATACAACAGAATTCAATAAATATAGGCATACATGGAAACCCTAAATAAAGACTAATAAATTATAATAAAGGACAAAAGACTAATAAGCTCCTATAATTATATATATACTATAACACTCCCCATCAAACGGAAGCATATATATTAATCCTGCCCAGCTTGTTACATGGGTCATCTATTGGAGTTCCATTCAAAACTTTTGTAGGGATATCACCTAATTGTTCTCCAGTCTGTTGTATTTTTTCCCAAACAAAATGACAATCAATTTCAATTTGTTTAGTACGCTAAAAAAATACTGGGTTAGATGTAATATGGAGAGCAACTTGATTGCCACACCACAACTTAGTCAGAATTGTAGTATTAGAGCCCAACTCAATCAAGAGTTGATGTAACCACATTATTTCACACATTGATTATGTCATTGCTCTGTATTCTGACTCAACACTTGATCGTGAAACTACGTTTTGCTTCTTACTCTTCCATGAAACCAAATTGCCTCTAACAAAAACACAATACCCAAAAGTCGATCTTCTATCTTCTTTTGATCGTGCCCAATCAGCATCTGAAAAACATTCAATGTTCATATGACCATGATCTTTATATAAGATCACACGTCCAGGTGTAGCCTTAAGGTAACATAGAATTTGTTGTCGGCATCCCAATGTTTCACCAGGGGTGAGGTCATAAACTGGCTCACAATGCTTGCCGAATAAGCTATGTCTGTATGTGTTACTGTAAGGTAATTCAACTTCCCATCCAGTCTTCTATATCTCTCAGGATCCTTAAATGATTCTTCATCTTTTAAAAGTTGTAGACTAGGCATCACCAGAGTAGCATGGCTTGGCTCCCAATTTCCTTGTCTCAAATAGCAAATCAAGCACATATTTTCTCTATGACAAAAATACCCTTCTTGCTTCTCATTACTTCGATGCCCAAAAAATACTTTATCACTCCCAAATCTTTAGTTTGAAATTGACTTTGGAGGAAAGATTTAAGAGACAATATACCTGACGTATCATTGTCGGTTATAACGATCTCATCAACATAGACAACAAGTAGAATAATTCCACACGTAGATCTCTAATAGGAAACTAAGTAATCCAATTTGCTTTTCTTCATTCCAAACTGCTCAAGAGCTTGACTAAATTTTCCAACCCATGCAAGTGGAGTATGCTTCAACCCATACAAGGATTTGTGAAGACACACACTTTATCATTTTCCCCCTGAGCAACAAATCCAAGTGGTTGCTTCATATAGACTTCCTCATGAAGATCACCATGGAGAAAGGCATTTTTAATGTCAAGTTGATGTAAATGCCAATCTTGAGATACTACCATAGAAATGAATAACCTGACACAAGTGAGTTTAGCATTAGGACAGAATGTATCAAAATAGTCAATCCCATACGTCTGAGCATAACCTTTTGCCACAAGGCGTGCTTTTAAACGAGCTATTGATCCATCGGGATTAACCTTACTTGAAAAGACCCATTTGCACCCAATAGTCATCTTTCCTGTCGGAAGAGATTCAAAATCCCAAGTACCATTATCATCTAAGGCATGAACCTCTTCAATCATTGCAGTGCACCACCTAGAATGAGACAAAGCTTCGTAAATGGTCTTAGGTATTGAGATAGTCAAGAGATTTAACAAACAAACATGTGTGAGATGATAATTGGTCATAAGATACACAAGAAGTAATAGTATAGGTGCAAGAACGTTTACCTTTACGAAAGGCAATGGGAAGCTCATCACTTGATTTTGGATCAAATCACAAATAGTCTTTTGGGACAGAATATTCACCTGGAGGTTGTTGCCGACGAAAGTAGACTTTAGTTATAGGTGGACGATTAGGGTCAGACGCTGAAGGAGACAGATCAGGGGAGGGAGTTGGAGAAGTGTGAGTATAAATAAAAAGATCATCCTCCTCCTCCCCCTGACTCGTACTAGGCAAAGAGGTAGTGAAAGGCTTATCCTCAAAGACAGTAATGTCTCGAGATACAAAATATCTATTTAAACTTGGACAATGACATTTATATTTTTTTGAACATGAGAATAACCTAAGAAAATGAACTTCAAAGACTTGGGGTCTAACTTTGTTAAATTAGGATGAACATCTCGAATGAAACAAGTACAACCAAATGTTTTAGGCTCAATAGGAAACAATTGTTTTGTTGGAAAGAGAACACGATAAGGAATCTGACCTTGAAGAGCAGATAAAGGCCATTTGATTTATAAGAAAACAAGTTGTTGAAATTGCATCAATCCAAAAATGCTTTGGAACATGCATTTGAAAGGATTATGCCCGTGCAGTTTCAAGCATATTCCTATTCCTTCGTTTTGCAACCCCATTTTGGGATGGAGTATCAACACAAGATGATTGGTGAATGATTCAATGTGTACAAAGGTACGACTTAAGTGCTTCTGAAAAATACTCACCAGCATTGTCAATTCTTAAGGTTTTAAGACATACACCAAACTAAGTTCGATTTTAGCATGGAAATTGCAGAAATGAGAAAGTATCTTAAAACAATTTTTCATAAAATATAACCAAGTCATGCGAGAGTGATCATCAACAAAGGTAACAAAATATCGAAATCTAGTTTTGAACTTAACTAAACATGGACTCTAATATCATAATGAACTACCTCGAAAGGGGAATTTGCCCGTTTATCAACCCTAAGATTGGAGCTAAGACGATGAAATTCGGAAAACTGACATGAGCCACAATTCAATAAAGACAAGTTATGAAATTGAGGACAAAGCTTTCTTAGACTGAGAGAGATGGATGATCAGACGACAATGGGCATCAAAAGGAGAAACAACTCTAGAACAAACAACTGTTGATGCCGATACTTGGTCATCAAAACTGTAAAGTCCTCAAGATTCATGTCCTTTCCTAATAATCTTCTTTGTTACAAGATCCTGAAACAAGCAATAGCCAGGATAGAATGAGACAGAACAGTTAAGGTCACGAATGATTTGACTAATGGAGATCAAGTAAAATGGCAACTGAGGTAAATGTAGGACAGATAACAAAGCGTATAGGGTGAGATTTACAATGCCAAATCCAATAACGTAAAACTTTGATCCATCTGCTAAGGTAACACTTGTAATGGATATAGATCACAAGATTGTAGAAAATAATTGGGGATTACCTGTCATATGAGCAACAGCACTCGGGTCTATGACCCATTGTGTAGAGGAGGAAAGGAGACAATGATTCGTGTTACCTGAATTAGCAATGGTTGTAACAGGGGCACATGCAAATGACGAAAGAGATGCTTTCGACGAGTTTTGGTACTTTTGAGATTTAGTAGACAAACCATGGATAGATTGAGCCTGCAATTGAACCAAATTAGGCATAACTATGGGATCTTGTTTGGTCATAGGATAGGAACAACCACACCAACAAGCCTCACCAAACCAAATGAGCAAAAAAACCACAAAACGAGTTGAAGTTAGCCACGAAATAGAACAAATCAGCTACAACACTTAGAAACAATTAGATTTTCTTCAAATATCGTCACTCCCTAATGGATTTCAATGAAACCGAAGGCACAAATTGACCGAAAACCAAGATTTGAGATGAACCCTACCGACGGAGCACAAAACGGAGCTTCCACGCGCTCCCATGTGCTGGCGCGTGGCAATGGAGATGGAGACCTTCCAGTGGCGCGTGAACCTCACACATGGTGTTTTCCAATGATGACGGCAAAACTCGGCAGAATATGGTGGTGCTCCTTCTAGGTTGGGTGGTGTTAACAAATGGTCACTCAAACCGATGACCCAAATGCACCCAAAGTTTGTAAGAAGCAAATCCTAAAGTAACCGTCAAACAAATATTCTAAACCAAATATTCTAAACTTTACACGGCTCTAATACCATGTTGAAGTTGGAGCTAAATATGAAAGAACTCTTTAATGCATTCTATACAATAAAGGACAAAAGACTAATAAGCTCCTATAATTATATATATATACTATAACAGACTTCACCAAATGCATAATCTTTTTCTCATTTAGTTTCTTTTGAGTCTTTCCTTGCATTAAGACCCTAACATAGGAAAAGAGAGAGGAAATTAAAAAAGTATGCAAAAGAAGTGATTAATTAGTTTCTCTTGAAGCAACTTATCAACCCTTATGAAATTGTTTGCTTATTTGTTATCTACTTACACGTTGAATTAACTTGTTCTTTGTTAGGCAAAAGATTTCGATCCTGATTCCCTGAGAAATGGATTGCCTAAAGCTGTTTCCTTGTTAGAATGGGCAATTTCAAAGGGCGAAGGAAAAGTATATGTGCATTGCACTGCTGGACTTGGAAGAGCCCCGGCCGTTGCAATAGCCTACTTGTATTGGTTTTGCGGAATGAATGTAAGTTCTTTTTTCCTTTGAAACTTATGTTCTAAATTTAAAATGCCTGCCCTACACAATTTTTTAGAGGGGAAAAAAGATAGGAAATCTATATCAACATTTCATTTCTAAACTCCTATCACATAAATGTTAATATTTTCTTACTTGCAAAGGCATCTTCACCAGTTCTCCAATGAAGTTACTTACTCATCGGGTTCTTCTTTTGGCTATGTGACAGTTAAATACAGCATATGAAGCACTGACTTCTAAAAGACCTTGTGGACCAAGTAAAAGAGCAATCCGTGGAGCAACATATGATCTATCTAAAAATGATCCGTGGAAGGAGCCATTTGAGAGCCTTCCAGATAATGCATTCGAGGATATTGCAGATTGGGAAAGAAACTTGATTCGGGATCGGGTTCGTTCTCTCCGTAGAACTTGAGTAAGTATGCAGGCATTTGCCTGGCTCATCTAGTTCATTTTCCTTTGTTTTTCCTTCTTCCTTCTGTTGCTTTATCTGGATTATCAGTGTTTTGAAATAGAATTGCCCAAGGAATCTAAATACATAGTTGTTCATCGTAGGTATTTACATATATCGATATTTCAGGAGTGTGTCAATGCGTGCAGGTTCAATGTCCTTCCATTTTTACGAGGATGATGGACTGGAGAACATAGAATGTGGTAGTTTTGCTTGCTGTTATTATCAGGCTATGGAGAAAAAGAGTTGGGACAAATACATGTAGCAATAGAGGTGAACCAATCTCAATTGGTAAATTTGAAGCCAGATGTATACAAAACACTATATTGAATCAAAGTAATAAATATTTGCTGCAGTGTTGCACTTGATCTCTGCATAGAAATTTAGTTTCCTAATCTTGAAATTGTCTTCAGGCCAGGCAAATGAATTCTCATTTGTCTAAGAATAATCTTGCTGTCACCTCAGATCATTGCAATTTTGTTTGTGTTTGATATGAGAACTGTAAACTAATTGTGCTACCTTCAATGGATTAATAAATCTCTCGTAAATTTTGTTCCTTCAA

mRNA sequence

GGTGAGTTGTGGAAGTTATTTTCACGTGGAAGGTCGGCGGATTTGCTCCTCAAGCTCCCAAGTTTCTTTATTCCATTCAATTTCATCGCACAAATTTTGATTACTTCGGTTGTTATTTGCGGTTTTTCATCTCAAGAAGAAAATGGGAGCTGCCAATCTCCCGTGTTTTTCATCGCTATATCGAGTTTTTCCACTTCAAAACAATGCTCCCAACAAATTTTTACCATTTTCTTCAATTCTTTCAAAACCCCTTTACCGATTGAACAGGATTTGCTGCGGAGTACCCGAGAGTGGAATTCAGCAAAACCCCTCAACTTCCAGACCTTCCTCTTCCAAGAACAGGATGGAAGAGTACAATTTAGCTATGAAGAAGATGATGAGGAACCCTTATGAGTATCACCATGAACTGGGTATGAACTATACTGTGATAGCTGACAATTTGATTGTCGGTTCCCAGCCTCAAAAACCTGAAGATATCAATTTCCTGAAAGAGGAAGAAGGTGTTGCCTATATTCTGAATTTACAGCAGGACAAGGATGTTGAGTACTGGGGAATCGACTTACAATCAATTATAGAAAGATGTAAAGAACTTGGAATTCGTCATATGAGGCAACCGGCAAAAGATTTCGATCCTGATTCCCTGAGAAATGGATTGCCTAAAGCTGTTTCCTTGTTAGAATGGGCAATTTCAAAGGGCGAAGGAAAAGTATATGTGCATTGCACTGCTGGACTTGGAAGAGCCCCGGCCGTTGCAATAGCCTACTTGTATTGGTTTTGCGGAATGAATTTAAATACAGCATATGAAGCACTGACTTCTAAAAGACCTTGTGGACCAAGTAAAAGAGCAATCCGTGGAGCAACATATGATCTATCTAAAAATGATCCGTGGAAGGAGCCATTTGAGAGCCTTCCAGATAATGCATTCGAGGATATTGCAGATTGGGAAAGAAACTTGATTCGGGATCGGGTTCGTTCTCTCCGTAGAACTTGAGAGTGTGTCAATGCGTGCAGGTTCAATGTCCTTCCATTTTTACGAGGATGATGGACTGGAGAACATAGAATGTGGTAGTTTTGCTTGCTGTTATTATCAGGCTATGGAGAAAAAGAGTTGGGACAAATACATGTAGCAATAGAGGTGAACCAATCTCAATTGGTAAATTTGAAGCCAGATGTATACAAAACACTATATTGAATCAAAGTAATAAATATTTGCTGCAGTGTTGCACTTGATCTCTGCATAGAAATTTAGTTTCCTAATCTTGAAATTGTCTTCAGGCCAGGCAAATGAATTCTCATTTGTCTAAGAATAATCTTGCTGTCACCTCAGATCATTGCAATTTTGTTTGTGTTTGATATGAGAACTGTAAACTAATTGTGCTACCTTCAATGGATTAATAAATCTCTCGTAAATTTTGTTCCTTCAA

Coding sequence (CDS)

ATGGGAGCTGCCAATCTCCCGTGTTTTTCATCGCTATATCGAGTTTTTCCACTTCAAAACAATGCTCCCAACAAATTTTTACCATTTTCTTCAATTCTTTCAAAACCCCTTTACCGATTGAACAGGATTTGCTGCGGAGTACCCGAGAGTGGAATTCAGCAAAACCCCTCAACTTCCAGACCTTCCTCTTCCAAGAACAGGATGGAAGAGTACAATTTAGCTATGAAGAAGATGATGAGGAACCCTTATGAGTATCACCATGAACTGGGTATGAACTATACTGTGATAGCTGACAATTTGATTGTCGGTTCCCAGCCTCAAAAACCTGAAGATATCAATTTCCTGAAAGAGGAAGAAGGTGTTGCCTATATTCTGAATTTACAGCAGGACAAGGATGTTGAGTACTGGGGAATCGACTTACAATCAATTATAGAAAGATGTAAAGAACTTGGAATTCGTCATATGAGGCAACCGGCAAAAGATTTCGATCCTGATTCCCTGAGAAATGGATTGCCTAAAGCTGTTTCCTTGTTAGAATGGGCAATTTCAAAGGGCGAAGGAAAAGTATATGTGCATTGCACTGCTGGACTTGGAAGAGCCCCGGCCGTTGCAATAGCCTACTTGTATTGGTTTTGCGGAATGAATTTAAATACAGCATATGAAGCACTGACTTCTAAAAGACCTTGTGGACCAAGTAAAAGAGCAATCCGTGGAGCAACATATGATCTATCTAAAAATGATCCGTGGAAGGAGCCATTTGAGAGCCTTCCAGATAATGCATTCGAGGATATTGCAGATTGGGAAAGAAACTTGATTCGGGATCGGGTTCGTTCTCTCCGTAGAACTTGA

Protein sequence

MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSRPSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT

Homology

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BLAST of PI0024497 vs. ExPASy Swiss-Prot
Match: Q9SRK5 (Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSF2 PE=1 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.4e-107
Identity = 183/245 (74.69%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 39  RLNRICCGVPESGIQQNPSTSRPS-SSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIA 98
           R  R   GV      +NP T+  S SSKN+ME+YN AMK++MR+PYEYHH+LGMNYT+I 
Sbjct: 38  RFPRNLAGVSCKFSGENPGTNGVSLSSKNKMEDYNTAMKRLMRSPYEYHHDLGMNYTLIR 97

Query: 99  DNLIVGSQPQKPEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQ 158
           D LIVGSQPQKPEDI+ LK+E+ VAYILNLQQDKD+EYWGIDL SI+ RCKELGIRHMR+
Sbjct: 98  DELIVGSQPQKPEDIDHLKQEQNVAYILNLQQDKDIEYWGIDLDSIVRRCKELGIRHMRR 157

Query: 159 PAKDFDPDSLRNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLN 218
           PAKDFDP SLR+ LPKAVS LEWA+S+G+G+VYVHC+AGLGRAP V+IAY+YWFC MNLN
Sbjct: 158 PAKDFDPLSLRSQLPKAVSSLEWAVSEGKGRVYVHCSAGLGRAPGVSIAYMYWFCDMNLN 217

Query: 219 TAYEALTSKRPCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           TAY+ L SKRPCGP+K AIRGATYDL+KNDPWKEPFESLP+NAFEDIADWER LI++RVR
Sbjct: 218 TAYDTLVSKRPCGPNKGAIRGATYDLAKNDPWKEPFESLPENAFEDIADWERKLIQERVR 277

Query: 279 SLRRT 283
           +LR T
Sbjct: 278 ALRGT 282

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BLAST of PI0024497 vs. ExPASy Swiss-Prot
Match: Q9FEB5 (Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.1e-36
Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 0


Query: 52  IQQNPSTSRPS---SSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQK 111
           + ++ S+S  S     + + +EY+  M + M     Y HELGMNY  I  +LIVGS  Q 
Sbjct: 54  VSESKSSSEMSGVAKDEEKSDEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQT 113

Query: 112 PEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELG-IRHMRQPAKDFDPDSL 171
           PED++ L+ + GV  I  LQQD D+EY+G+D+ SI    K+   I+H+R   +DFD   L
Sbjct: 114 PEDVDKLR-KIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDL 173

Query: 172 RNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKR 231
           R  LP  V  L  A+ +  G  YVHCTAG+GRAPAVA+ Y++W  G  L  A++ L SKR
Sbjct: 174 RMRLPAVVGTLYKAVKRNGGVTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKR 233

Query: 232 PCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDI 265
            C P   AIR AT D+      K    +L D  F  +
Sbjct: 234 SCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRV 269

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BLAST of PI0024497 vs. ExPASy Swiss-Prot
Match: G4LTX4 (Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa OX=21020 GN=DSP4 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 98/243 (40.33%), Postives = 133/243 (54.73%), Query Frame = 0


Query: 5   NLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPL---YRLNRICCGVPESGIQQNPSTSRP 64
           NLP  S+L    PLQ+   ++  P  S+ +  +     L+R       SG   +  TS  
Sbjct: 6   NLPRSSAL----PLQSFKSHQRRPPCSVNTLGVMSNVNLHRSMAVKAISGPTSSAETSDA 65

Query: 65  SSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEGV 124
           +  + + E Y+  M + M     Y HELG+NY  I  +LIVGS  Q PED++ L+   GV
Sbjct: 66  NVEEEKSETYSTNMTEAMGAVLTYRHELGINYNFIRPDLIVGSCLQTPEDVDKLR-SIGV 125

Query: 125 AYILNLQQDKDVEYWGIDLQSIIERCKEL-GIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 184
             I  LQQ+ D+EY+G+D+  I E  K    I+H+R   +DFD   LR  LP  VS L  
Sbjct: 126 KTIFCLQQNSDLEYFGVDINGIREYAKTYDDIQHLRAEIRDFDAFDLRVRLPAVVSKLYK 185

Query: 185 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 244
           AI++  G  YVHCTAGLGRAPAV +AY++W  G  L  A+  L SKR C P   AI+ A 
Sbjct: 186 AINRNGGVTYVHCTAGLGRAPAVTLAYMFWVQGYKLIEAHNLLQSKRSCFPKLDAIKSAA 243

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BLAST of PI0024497 vs. ExPASy Swiss-Prot
Match: F4J117 (Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSF1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-26
Identity = 68/176 (38.64%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 68  MEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEGVAYILNL 127
           +EEY  A+ +  +    Y+H LGM Y+ I + + VGS  Q  ED+  L  E G+  ILN 
Sbjct: 268 LEEYIKALDR-SKGELSYNHALGMRYSKITEQIYVGSCIQTEEDVENL-SEAGITAILNF 327

Query: 128 QQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEWAISKGEG 187
           Q   + + WGID QSI + C++  +  +  P KD D   LR  LP  V LL   + K   
Sbjct: 328 QGGTEAQNWGIDSQSINDACQKSEVLMINYPIKDADSFDLRKKLPLCVGLLLRLLKKNH- 387

Query: 188 KVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGATYDL 244
           +V+V CT G  R+ A  IAYL+W    +L+ AY  +T    C P + AI  AT+DL
Sbjct: 388 RVFVTCTTGFDRSSACVIAYLHWMTDTSLHAAYSFVTGLHACKPDRPAIAWATWDL 440

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BLAST of PI0024497 vs. ExPASy Swiss-Prot
Match: O95278 (Laforin OS=Homo sapiens OX=9606 GN=EPM2A PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 0


Query: 91  MNYTVIADNLIVGSQPQKPEDINF-LKEEEGVAYILNLQQDKDVEYWG---------IDL 150
           M+Y+ I  N+ +GS P++ E +   LK E G+  ++N Q + D+             +  
Sbjct: 155 MHYSRILPNIWLGSCPRQVEHVTIKLKHELGITAVMNFQTEWDIVQNSSGCNRYPEPMTP 214

Query: 151 QSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRA 210
            ++I+  +E G+ ++  P  D   +     LP+AV LL   + KG   VYVHC AG+GR+
Sbjct: 215 DTMIKLYREEGLAYIWMPTPDMSTEGRVQMLPQAVCLLHALLEKGH-IVYVHCNAGVGRS 274

Query: 211 PAVAIAYLYWFCGMNLNTAYEALTSKRP 229
            A    +L +  G NL      L +KRP
Sbjct: 275 TAAVCGWLQYVMGWNLRKVQYFLMAKRP 301

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BLAST of PI0024497 vs. ExPASy TrEMBL
Match: A0A0A0KQM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218830 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.1e-160
Identity = 274/282 (97.16%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNKFLPFSSILSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKFLPFSSILSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRME+YNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMEDYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGIDLQSIIERCKELGI HMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIHHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR+LRRT
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRALRRT 282

[Close]

BLAST of PI0024497 vs. ExPASy TrEMBL
Match: A0A1S3C4E0 (phosphoglucan phosphatase LSF2, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496723 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.4e-158
Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DRVRSLRRT
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRVRSLRRT 282

[Close]

BLAST of PI0024497 vs. ExPASy TrEMBL
Match: A0A1S3C3W8 (phosphoglucan phosphatase LSF2, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496723 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 5.9e-155
Identity = 266/277 (96.03%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DRV+
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRVQ 277

[Close]

BLAST of PI0024497 vs. ExPASy TrEMBL
Match: A0A1S3C5J9 (phosphoglucan phosphatase LSF2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496723 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.0e-154
Identity = 266/277 (96.03%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DR R
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRER 277

[Close]

BLAST of PI0024497 vs. ExPASy TrEMBL
Match: A0A6J1FPR7 (phosphoglucan phosphatase LSF2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447363 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.0e-146
Identity = 254/282 (90.07%), Postives = 268/282 (95.04%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGA++L CFSSL+ VFP  NNA NK LPF S  SKPL+RLN+I CG+PESGI+QNPS+SR
Sbjct: 1   MGASSLACFSSLFAVFPSHNNAHNKSLPFCSNPSKPLFRLNKIRCGLPESGIRQNPSSSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
            SSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDI+FLKEEEG
Sbjct: 61  ASSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDIDFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGIDLQS+IERCKELGI HMRQPAKDFDPDSLRNGLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGIDLQSVIERCKELGIHHMRQPAKDFDPDSLRNGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AIS+G+GK YVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSK+AIRGAT
Sbjct: 181 AISEGKGKAYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKKAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDP KEPFESLPDNAFEDIADWERNLI+DRVRSLRRT
Sbjct: 241 YDLSKNDPGKEPFESLPDNAFEDIADWERNLIQDRVRSLRRT 282

[Close]

BLAST of PI0024497 vs. NCBI nr
Match: XP_011655031.1 (phosphoglucan phosphatase LSF2, chloroplastic [Cucumis sativus] >XP_011655032.1 phosphoglucan phosphatase LSF2, chloroplastic [Cucumis sativus] >KGN50717.1 hypothetical protein Csa_005846 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 274/282 (97.16%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNKFLPFSSILSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKFLPFSSILSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRME+YNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMEDYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGIDLQSIIERCKELGI HMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIHHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR+LRRT
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRALRRT 282

[Close]

BLAST of PI0024497 vs. NCBI nr
Match: XP_008456918.1 (PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X3 [Cucumis melo] >XP_008456919.1 PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 567.0 bits (1460), Expect = 9.1e-158
Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DRVRSLRRT
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRVRSLRRT 282

[Close]

BLAST of PI0024497 vs. NCBI nr
Match: XP_008456916.1 (PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 556.6 bits (1433), Expect = 1.2e-154
Identity = 266/277 (96.03%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DRV+
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRVQ 277

[Close]

BLAST of PI0024497 vs. NCBI nr
Match: XP_008456915.1 (PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154
Identity = 266/277 (96.03%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           MGAANLPCFSSL+ VFPLQNNAPNK LPFSS LSKPLYR NRICCGVPESGIQQNPSTSR
Sbjct: 1   MGAANLPCFSSLFGVFPLQNNAPNKLLPFSSTLSKPLYRFNRICCGVPESGIQQNPSTSR 60

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
           PSSSKNRM+EYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 61  PSSSKNRMDEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGI+LQSIIERCKELGIRHMRQPAKDFDPDSLR GLPKAVSLLEW
Sbjct: 121 VAYILNLQQDKDVEYWGINLQSIIERCKELGIRHMRQPAKDFDPDSLRTGLPKAVSLLEW 180

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AISKG+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 181 AISKGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLI DR R
Sbjct: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIWDRER 277

[Close]

BLAST of PI0024497 vs. NCBI nr
Match: XP_038891555.1 (phosphoglucan phosphatase LSF2, chloroplastic [Benincasa hispida])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 263/282 (93.26%), Postives = 271/282 (96.10%), Query Frame = 0


Query: 1   MGAANLPCFSSLYRVFPLQNNAPNKFLPFSSILSKPLYRLNRICCGVPESGIQQNPSTSR 60
           M A++LPCFS L+  FP QNNAPNKFLPFSSI+SKP +RLNRICCG PESGIQQ PSTSR
Sbjct: 44  MAASSLPCFSLLFAFFPHQNNAPNKFLPFSSIISKPHFRLNRICCGAPESGIQQIPSTSR 103

Query: 61  PSSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 120
            SSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG
Sbjct: 104 ASSSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEG 163

Query: 121 VAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEW 180
           VAYILNLQQDKDVEYWGIDLQSII+RCKELGI HMRQPAKDFDPDSLRNGLPKAVSLLEW
Sbjct: 164 VAYILNLQQDKDVEYWGIDLQSIIKRCKELGIHHMRQPAKDFDPDSLRNGLPKAVSLLEW 223

Query: 181 AISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 240
           AIS+G+GKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT
Sbjct: 224 AISEGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGAT 283

Query: 241 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVRSLRRT 283
           YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRV SLRRT
Sbjct: 284 YDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVHSLRRT 325

[Close]

BLAST of PI0024497 vs. TAIR 10
Match: AT3G10940.1 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 389.0 bits (998), Expect = 3.2e-108
Identity = 183/245 (74.69%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 39  RLNRICCGVPESGIQQNPSTSRPS-SSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIA 98
           R  R   GV      +NP T+  S SSKN+ME+YN AMK++MR+PYEYHH+LGMNYT+I 
Sbjct: 38  RFPRNLAGVSCKFSGENPGTNGVSLSSKNKMEDYNTAMKRLMRSPYEYHHDLGMNYTLIR 97

Query: 99  DNLIVGSQPQKPEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELGIRHMRQ 158
           D LIVGSQPQKPEDI+ LK+E+ VAYILNLQQDKD+EYWGIDL SI+ RCKELGIRHMR+
Sbjct: 98  DELIVGSQPQKPEDIDHLKQEQNVAYILNLQQDKDIEYWGIDLDSIVRRCKELGIRHMRR 157

Query: 159 PAKDFDPDSLRNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLN 218
           PAKDFDP SLR+ LPKAVS LEWA+S+G+G+VYVHC+AGLGRAP V+IAY+YWFC MNLN
Sbjct: 158 PAKDFDPLSLRSQLPKAVSSLEWAVSEGKGRVYVHCSAGLGRAPGVSIAYMYWFCDMNLN 217

Query: 219 TAYEALTSKRPCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDIADWERNLIRDRVR 278
           TAY+ L SKRPCGP+K AIRGATYDL+KNDPWKEPFESLP+NAFEDIADWER LI++RVR
Sbjct: 218 TAYDTLVSKRPCGPNKGAIRGATYDLAKNDPWKEPFESLPENAFEDIADWERKLIQERVR 277

Query: 279 SLRRT 283
           +LR T
Sbjct: 278 ALRGT 282

[Close]

BLAST of PI0024497 vs. TAIR 10
Match: AT3G52180.1 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37
Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 0


Query: 52  IQQNPSTSRPS---SSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQK 111
           + ++ S+S  S     + + +EY+  M + M     Y HELGMNY  I  +LIVGS  Q 
Sbjct: 54  VSESKSSSEMSGVAKDEEKSDEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQT 113

Query: 112 PEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELG-IRHMRQPAKDFDPDSL 171
           PED++ L+ + GV  I  LQQD D+EY+G+D+ SI    K+   I+H+R   +DFD   L
Sbjct: 114 PEDVDKLR-KIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDL 173

Query: 172 RNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKR 231
           R  LP  V  L  A+ +  G  YVHCTAG+GRAPAVA+ Y++W  G  L  A++ L SKR
Sbjct: 174 RMRLPAVVGTLYKAVKRNGGVTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKR 233

Query: 232 PCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDI 265
            C P   AIR AT D+      K    +L D  F  +
Sbjct: 234 SCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRV 269

[Close]

BLAST of PI0024497 vs. TAIR 10
Match: AT3G52180.2 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37
Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 0


Query: 52  IQQNPSTSRPS---SSKNRMEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQK 111
           + ++ S+S  S     + + +EY+  M + M     Y HELGMNY  I  +LIVGS  Q 
Sbjct: 54  VSESKSSSEMSGVAKDEEKSDEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQT 113

Query: 112 PEDINFLKEEEGVAYILNLQQDKDVEYWGIDLQSIIERCKELG-IRHMRQPAKDFDPDSL 171
           PED++ L+ + GV  I  LQQD D+EY+G+D+ SI    K+   I+H+R   +DFD   L
Sbjct: 114 PEDVDKLR-KIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDL 173

Query: 172 RNGLPKAVSLLEWAISKGEGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKR 231
           R  LP  V  L  A+ +  G  YVHCTAG+GRAPAVA+ Y++W  G  L  A++ L SKR
Sbjct: 174 RMRLPAVVGTLYKAVKRNGGVTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKR 233

Query: 232 PCGPSKRAIRGATYDLSKNDPWKEPFESLPDNAFEDI 265
            C P   AIR AT D+      K    +L D  F  +
Sbjct: 234 SCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRV 269

[Close]

BLAST of PI0024497 vs. TAIR 10
Match: AT3G01510.1 (like SEX4 1 )

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27
Identity = 68/176 (38.64%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 68  MEEYNLAMKKMMRNPYEYHHELGMNYTVIADNLIVGSQPQKPEDINFLKEEEGVAYILNL 127
           +EEY  A+ +  +    Y+H LGM Y+ I + + VGS  Q  ED+  L  E G+  ILN 
Sbjct: 268 LEEYIKALDR-SKGELSYNHALGMRYSKITEQIYVGSCIQTEEDVENL-SEAGITAILNF 327

Query: 128 QQDKDVEYWGIDLQSIIERCKELGIRHMRQPAKDFDPDSLRNGLPKAVSLLEWAISKGEG 187
           Q   + + WGID QSI + C++  +  +  P KD D   LR  LP  V LL   + K   
Sbjct: 328 QGGTEAQNWGIDSQSINDACQKSEVLMINYPIKDADSFDLRKKLPLCVGLLLRLLKKNH- 387

Query: 188 KVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIRGATYDL 244
           +V+V CT G  R+ A  IAYL+W    +L+ AY  +T    C P + AI  AT+DL
Sbjct: 388 RVFVTCTTGFDRSSACVIAYLHWMTDTSLHAAYSFVTGLHACKPDRPAIAWATWDL 440

The following BLAST results are available for this feature:

BLAST of PI0024497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRK5	4.4e-107	74.69	Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FEB5	4.1e-36	41.47	Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
G4LTX4	1.2e-35	40.33	Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa OX=21020 GN=DSP4...	[more]
F4J117	2.9e-26	38.64	Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O95278	2.4e-12	31.08	Laforin OS=Homo sapiens OX=9606 GN=EPM2A PE=1 SV=2	[more]

BLAST of PI0024497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQM6	6.1e-160	97.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218830 PE=4 SV=1	[more]
A0A1S3C4E0	4.4e-158	96.45	phosphoglucan phosphatase LSF2, chloroplastic isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3C3W8	5.9e-155	96.03	phosphoglucan phosphatase LSF2, chloroplastic isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A1S3C5J9	1.0e-154	96.03	phosphoglucan phosphatase LSF2, chloroplastic isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A6J1FPR7	3.0e-146	90.07	phosphoglucan phosphatase LSF2, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of PI0024497 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655031.1	1.3e-159	97.16	phosphoglucan phosphatase LSF2, chloroplastic [Cucumis sativus] >XP_011655032.1 ...	[more]
XP_008456918.1	9.1e-158	96.45	PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X3 [Cucumis mel...	[more]
XP_008456916.1	1.2e-154	96.03	PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X2 [Cucumis mel...	[more]
XP_008456915.1	2.1e-154	96.03	PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic isoform X1 [Cucumis mel...	[more]
XP_038891555.1	2.0e-152	93.26	phosphoglucan phosphatase LSF2, chloroplastic [Benincasa hispida]	[more]

BLAST of PI0024497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10940.1	3.2e-108	74.69	dual specificity protein phosphatase (DsPTP1) family protein	[more]
AT3G52180.1	2.9e-37	41.47	dual specificity protein phosphatase (DsPTP1) family protein	[more]
AT3G52180.2	2.9e-37	41.47	dual specificity protein phosphatase (DsPTP1) family protein	[more]
AT3G01510.1	2.1e-27	38.64	like SEX4 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020422	Dual specificity protein phosphatase domain	SMART	SM00195	dsp_5	coord: 92..246 e-value: 1.8E-4 score: 21.8
IPR020422	Dual specificity protein phosphatase domain	PROSITE	PS50054	TYR_PHOSPHATASE_DUAL	coord: 92..249 score: 28.500475
IPR000340	Dual specificity phosphatase, catalytic domain	PFAM	PF00782	DSPc	coord: 115..229 e-value: 3.0E-15 score: 56.2
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10	Protein tyrosine phosphatase superfamily	coord: 75..282 e-value: 9.0E-69 score: 233.0
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 84..232
None	No IPR available	PANTHER	PTHR46642:SF2	PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC	coord: 29..281
None	No IPR available	PANTHER	PTHR46642	DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN	coord: 29..281
None	No IPR available	CDD	cd14526	DSP_laforin-like	coord: 91..238 e-value: 1.11072E-81 score: 240.561
IPR000387	Tyrosine specific protein phosphatases domain	PROSITE	PS50056	TYR_PHOSPHATASE_2	coord: 169..228 score: 11.48455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024497.3	PI0024497.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046838	phosphorylated carbohydrate dephosphorylation
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0005983	starch catabolic process
biological_process	GO:0016311	dephosphorylation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0019203	carbohydrate phosphatase activity
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:2001070	starch binding
molecular_function	GO:0016791	phosphatase activity