PI0024364 (gene) Melon (PI 482460) v1

Overview


Name	PI0024364
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Location	chr11: 4531539 .. 4537368 (+)
RNA-Seq Expression	PI0024364
Synteny	PI0024364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAGTTTGTGAGCCTACCTCTCCCAATGTTCTATTAATCACATTCTGTCCATAGAATTATGACACAAATAGGGAGTCAACGAAATTCAGATTTCTCGATATATTCTCTTAATTGATCATGAATGCTATATATTTTGATGAAAGATGTGTGCAGCCAATCATTGAACGTTTGAACAGGATAACGATTTAAATATCGCGCTTTAATTTTGAAATCGAGACAGAGTTTTGCAGGTGACATCGGGATGGGTTGCGCCTCCCTAATGCTAGTGGAAGGTGTGTGGAACCACTCGTTGAACTTTTGAACTTGAATTGGGACAGGGTATTGCAAATGACATTGGGCTGGGTTGGGTCTCACTATTACGAGTGACGGTTTGTAGAAACAATCGTTCAAAAGTGAAGTTTGTGCCGGGGCATGTCATCAGATGAGGGATCATCCATCGTCAGGCTGGGAAGTTCAACCTAAATGGGATACCCTTTGAAGGCTGAAATTGCCCCATGGCGTAAGTAAAAGTTATATCGCACATGCGAGGGTCATCCGTACGAAAAGCTCGAGGGGGTTAGTTTGGCAATTTTCCCGCCGTTTCCTCTAAGCTAACATTTCTAAGTTGCTAACCTTAACTCTGTGCTACCTCTTCACTCGGTCTGGTCGGCATTTCTCTCAGATTCTCACTCTTAGTTTACAGAATTCGACTTAGAGGATTGAAAGGTTTGAAAATTGAGAAAAAAAAAATTTCTTCTGTTTTTTCGATTCTTTTTTTTCTATAACCAGAGCCAATTCGTTTAATTGGTAAGCAGAGAATGAAACATGATTGCAGTTCATTTTCTGCCATGATCTGCAAGCAATTTTTGTTTGCCATGATACCAACCTAAATTTTCTATTTTCTGCTGCTTTTTCGTCTTGGTGAAATTAGGAATTGATCGAATTAGAGATGGCAAGCGCAGTAGATGCCGTAGGAGATCCAACTCCTACATCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAATTGTCGGTGGGAGAATGTGGCATACCTTCAGTGCAAACAGAAGGATCCGAACCCGGAGAAATGCCTGGATAAATGCCATCAAGTCACTCGATGCGTTCTCTCCCTGTAAGCCAATAATATTTTGTTGCTTTCTTAGCCGAAGTATGGTATGGATTCACATTTCTCTTGAATTTTACTTTAGTTATCATATGATCGTCTTCTAGTAAATGCGGGGGGTTCAGAAATACATTGCCTTATCAATCATATGACCGTCTTCTGTTATCACATGATAGTCTTCAAGCAAATAGAGTGTTAGAAAATATATTGGTTTTTTTCTTGGATGATGTAATAAAATTTACCTTCGCTTACCAGCTTAAGCTTTTGGGTTGAACCTCTAACCTCTAAGGATGGATGTCATATTAATACTACTGAATCAAACTCACTACATTGCTTTAGTAATCATATGATCATCTTCTAGCAGGTTAGGAAATAAATTGCTTCAGTAACCATACCATCGCCTCCTGTTCCGCTAGGAAACTGAGGACCAGGAAATTGGAAAGAAAATAATGGGTATTTCTTAGGTTTGACATAAAATAATTAGTACTGGTGCTGATAAAATCTTAGGTTGATAATCATGTGACTGACTGAATTGTTAGTGTCCATGGTCGTATGAGATCATCCATTCACATCTCATCCCCATTAGCTCAGGCTCATGGTGGAAATAATGGACCGTGGAGGTCTTCCACATTCAGAAGGGATGGTGGAAATAATGGATATGGTGATGGAGTTGGGCTGTAAAGTGCATCATCTTCCCATAATTACCTTGGTTTTTCCCTTGATGGTAACCACCACTCCCTCGCCTCATGGGTACTGTTAGTTGACAAGTTCAAAGCAAAGATTTCCCAGTGGCAAAGCTCCTTGCTTTCAAGAGGGATGCCTAGCCTTGATGCAGTTTTTGCTTAATAGGCTACTATTGTATGCCAAAGTGAGCTTAAGTAGTATTGTCATGTATTCAAAAGAAGGAAAAAAAAAAAAGGCTGCCATTGTTATTTTTCTCTCCTCAAAAATTTGGTGGGCATTATAAATAGTATGGAGAAGTTGGGCAGATATCCATATATTTTTTTTGGAGTGATGGTGATTACGACAAGGTCAGTAGTTATTTGGTTAAATGGAATATCATCTCTCTACTCCTTTGCAATGGTGGTTTGGGGATAGGATCTCTTAGAAACAAAACTCTTGCTCCTCTCAAAATGGCTGTGGAAATTCTCAATATAAAGGAAGGCCCTTTGGAGGAAAGTGGCTAGCAGAATTTATGATGAAGGGCCTCTAGGATGGATGATCCCCTCAGCCTAAAGGTTGCTCCAAAAATGCAGCCCATGTTTGACACTATTGTTCTGTGCTTGTTAAATTCAAAGCTGGAAGCGTGCAAGAGGTTTGCTTTCGGAGGGATGTGTGGAAGCCCTTCGTGAAGCTTTTCCAGAAATTTTTAGCTTCTCTTAGGACAGAAGCGACAGTGGCAGGTTGGGCTGAGGTGGACTCCTCTGGTGCTTTCTCTCTACGAGAACACTTCTCTTGAAAATAGGCCGACTATCAGGCATACATGACTGATACGGTTTGGAATTTTAAAATTCTTAAGCAGTTGGAGGTGTTTTCGTCTTGCGTCTTCACAAGAGCTTTGATACTCAACATGTGATGCAAAGAAATGTTATTTGACTTATCCAACCTGTCAGGTGCCTCCTTTGATGAGAAAATGGGGAACCTTAGATCGTATTCCTCTGCATTGCTTCGGTGCTTGACAATGCTGAATTTGGACATTTGCTGCTGGAGCCACTTTATAGCTTAGCGAGAGCCCTTGCTGTGTGAATGACTTATTGTCAGAGTTTATCAGTGATCGAAATCTATCACTGATAGACCATATTGCAAATATTGTTCTATTACTCCATATGAGTCTACCAACGATAGAAGTATATCACTGATAGATTTTGCTATATTTGCAATTTTTAAAAAATGTTGCTACTCTTAGTTATTTCCCCTAAAATGGTTACTCATTGCAGTTGCCCTTTAAATTATTAGTTAGGTGTTATTCTTTTGGATTGGAAGCCCTTTTTATGGGTTTATGCTCTTTTTATATCCTTTTATGTTTCTTAAGAAAAGTTTAGTTTCTTATTAGAAAAGGAAATTAGAAAGAAGAGAATTGCAATGGAGTCCGATATGGCTTTTGATTTAAGTATCAGTATGGATTCTGATCCAACTTTCATGGTCAATGACTCAATAATGAGGCCCTCATGGAAAAGTCAGAGGAAGAAGTTCTATATTCATTTCCATGAAGAAAATATTCATCATTCACTTGAAAACATCGCCTCTGGTACATTGTTTGCAAGGTTTAGGAAGAATATTTTTCCCAAATATTGGTGTTCCTTGTTAGAACTTATTGATCATTTATCTTTTCAGAATATTTATTTGTATTCGGATGCTTTAATGTTCTCAATTTAGTTTTTTTTCAAAGGGAGACAAGCCTCTTTTGTTGGATAAAAAAAGTGAGACTTAAAAGCTCATAGTACCGGAGAGTTATACAATGAGCAAAATAACCTAACGATCAGTAGGCGCACCCAGACATCTCAATGATTGACACCCCTTAGCGCTCTCATCATATCCAAAATAAGTGATAACAAGCATGGCTAAAAGGCCAAACATTTGAATTTTCTCAATTTAGTTGATACTTTTCTCTCTTTTTGTCGGAATTCTTGATTCATTGAACGACTAATAAATTTGAATTCTAACACTAATGATTCTGATTCTGTGTTGTCTTCTTGATTCTCCAATTTTTTGTTTCCTATGTTCTTCCTAGACAAATAGTACTGCAGCATGGATTAAGGGCATTCTGTTGGTTTTGATATCCATGAAGTAGTATATGCTCTAATTCTTTTAGTTGGACAGTAACAAATATGATATTTCATTAGATAAATGACGAACTAGGGGTTTGCAGCGGTCGATCAGTGTCAGTTCGACCAAACCGACACTGAACTGAATATGGTTAGTTTAGTAAACATTCAAATCGACCTTGATTGTCGAGGAGTGCAAACCGGCCCATGGCCATTGGTTGATCAGTTTTGGTCTCTTTTATTCTTTAAATTTTTTTTTAAAAAATTGTTGGTTTAGATTTTTCTCAAACTAACACCAATCGAGCTCCTCCTCTTCTTTGGCGGATCGCCTTCGATTTGGTTGGCTCAGTTTTTCAGTTTATCATGTTCATCCCTAGAATGAAGTATTCAACAACAAGGGTGGAGAGTCAACCCCAAAACTAAAGGTGGCAGGTTGTACAACTACAAAATCCCTCCGATTATAGCTCAAATTTCATAAAAGAGTATACTATGAACTAAGAATATTTGTATGATCAGATGTGATCCCAAACTGATATAAAATGTTAAAAAAATTCAAGGATTTTTTTACCAGATATATTGAATTGCAAGTTATTTATTTGTTTACTTCTTTTTTTATAGAAATAATTGCATTCTTAGAATAAAAGAATATAAGTACATTTAGGAATAGTTATTAACCATGCGTTTGATTGTTTATTTTAAAAAATAAGCATCATTTTTCTTTAGTTTGTTGATATTCTGAAATGTTTGACTCTATTCTCTACCTTTGAGTCTATGACCAAGGATTAAAATATCGATATTAATATCGAGATTTATATTTTACGGATATATCGATAAAATATCAATATTCGATATCAATGGATACTTTTGTAAGTCGAAACTTATAAAATTTATTTAGACTAATAACTAAGTTGTTTTTACTCTAAAACTAAGTTATGGATATTATTATTAGTGTTCCTTTCTATATTGGACTAAATAATTGACATTTTTTATGCTTTTCAAGCATTTATAAAGATGTTGGGATTTCTATGGATGTTTAATGTTTGATTTACATATATTTTCATCCTTGATTGTGACTTATCTTTTTTACCTTTTTTCCCTTGTTGGTTTGGCAGTATTACCGTTTAGTTCATGAGACTGCAGCCACTTCTCATTACCATTCTCTTCTCTTGTCTTTTACAAATTTTCACTGTTCTTGATTCACTTTTTTTATCACTTTTTAGCTGGATATTTTGTGAGTGAGACATTCTTTCATTTCATCTTTTTCTATTCTATCTCATCATAGAATCACTTTCCATACCCCTCATCAGTTTTACATTTGGCAACTATCCTTGTTTAAATAATTAACCTAGAGGCAGAAGTATCTCTGCCTCGGTATAGGAGGTTGCGAGGTTTGGTAACTACGTCTTTTTGTAATTATGGTCATGGTATTTTTTAATATCCGAAAGTGTTCAGGTCAACTTATACGCATCTCCACTAATGTCACGGGACTTGTCCTGACCCTACAACATTTAGGTATCAAGAAAACTCGTAGGAAATTAATTTCTAGATAAGTGTCCACCATGAATTGAACTCATGATCTCTTAGTTAGTTATTGAGAATTATAATCATGGCTTGATTTGGTGGACTAGAGTCCCTTTATGTTTTATGTTTTATGTATTTGTATATTCTCTTTCATTTTGCTCAATGAAAACTTGGTTTCTTAAAAAGGAAAAAACAAATTAATTAATCAAAAGGCTGCTTTTGTTTTCCAGGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCATGTCGGTTGTACGTACTAGCATACAAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGCTTGTCCCTTGTAATGATTTTCCTCATATATGTAAACTGATTCCAATAATTTTTCTTGTTTGGAAATGAGCAAGTACTGTTGTTATTGCCA

mRNA sequence

GTTAAGTTTGTGAGCCTACCTCTCCCAATGTTCTATTAATCACATTCTGTCCATAGAATTATGACACAAATAGGGAGTCAACGAAATTCAGATTTCTCGATATATTCTCTTAATTGATCATGAATGCTATATATTTTGATGAAAGATGTGTGCAGCCAATCATTGAACGTTTGAACAGGATAACGATTTAAATATCGCGCTTTAATTTTGAAATCGAGACAGAGTTTTGCAGGTGACATCGGGATGGGTTGCGCCTCCCTAATGCTAGTGGAAGGTGTGTGGAACCACTCGTTGAACTTTTGAACTTGAATTGGGACAGGGTATTGCAAATGACATTGGGCTGGGTTGGGTCTCACTATTACGAGTGACGGTTTGTAGAAACAATCGTTCAAAAGTGAAGTTTGTGCCGGGGCATGTCATCAGATGAGGGATCATCCATCGTCAGGCTGGGAAGTTCAACCTAAATGGGATACCCTTTGAAGGCTGAAATTGCCCCATGGCGTAAGTAAAAGTTATATCGCACATGCGAGGGTCATCCGTACGAAAAGCTCGAGGGGGTTAGTTTGGCAATTTTCCCGCCGTTTCCTCTAAGCTAACATTTCTAAGTTGCTAACCTTAACTCTGTGCTACCTCTTCACTCGGTCTGGTCGGCATTTCTCTCAGATTCTCACTCTTAGTTTACAGAATTCGACTTAGAGGATTGAAAGGAATTGATCGAATTAGAGATGGCAAGCGCAGTAGATGCCGTAGGAGATCCAACTCCTACATCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAATTGTCGGTGGGAGAATGTGGCATACCTTCAGTGCAAACAGAAGGATCCGAACCCGGAGAAATGCCTGGATAAATGCCATCAAGTCACTCGATGCGTTCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCATGTCGGTTGTACGTACTAGCATACAAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGCTTGTCCCTTGTAATGATTTTCCTCATATATGTAAACTGATTCCAATAATTTTTCTTGTTTGGAAATGAGCAAGTACTGTTGTTATTGCCA

Coding sequence (CDS)

ATGGCAAGCGCAGTAGATGCCGTAGGAGATCCAACTCCTACATCGGCGGTGCTAATGTCTTCGTCAAAGCACATTGCGAACAATTGTCGGTGGGAGAATGTGGCATACCTTCAGTGCAAACAGAAGGATCCGAACCCGGAGAAATGCCTGGATAAATGCCATCAAGTCACTCGATGCGTTCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCATGTCGGTTGTACGTACTAGCATACAAATGA

Protein sequence

MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCVLSLLKDLHQRCTKEMDACRLYVLAYK

Homology

[Close]

BLAST of PI0024364 vs. ExPASy Swiss-Prot
Match: Q8LGE7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana OX=3702 GN=At5g18800 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-25
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          M+SAVDA G+P PTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDK   VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLLKDLHQRCTKEMD 77
          L LLKDLHQ+C KEMD
Sbjct: 61 LGLLKDLHQKCQKEMD 76

[Close]

BLAST of PI0024364 vs. ExPASy Swiss-Prot
Match: Q9SQT4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis thaliana OX=3702 GN=At3g06310 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-23
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 3  SAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCVLS 62
          +AVD  G+P PTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+K   VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LLKDLHQRCTKEMDA 78
          LLKDLHQRC KEMDA
Sbjct: 65 LLKDLHQRCPKEMDA 79

[Close]

BLAST of PI0024364 vs. ExPASy TrEMBL
Match: A0A0A0LY30 (CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-31
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIA  CR ENVAYLQCKQKDPNPEKCLDK HQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. ExPASy TrEMBL
Match: A0A1S3BBD5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo OX=3656 GN=LOC103488226 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-31
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIA  CR ENVAYLQCKQKDPNPEKCLDK HQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. ExPASy TrEMBL
Match: A0A6J1KXR2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita maxima OX=3661 GN=LOC111499155 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCK+KDPNPEKCLDK  QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTK+MDA
Sbjct: 61 LSLLKDLHQRCTKDMDA 77

[Close]

BLAST of PI0024364 vs. ExPASy TrEMBL
Match: A0A6J1H2X4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111459990 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCK+KDPNPEKCLDK  QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTK+MDA
Sbjct: 61 LSLLKDLHQRCTKDMDA 77

[Close]

BLAST of PI0024364 vs. ExPASy TrEMBL
Match: A0A6J1KIR7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita maxima OX=3661 GN=LOC111494823 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.1e-30
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCK+KDPNPEKCL+K  QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. NCBI nr
Match: XP_038906805.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 4.0e-32
Identity = 72/77 (93.51%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCKQKDPNPEKCLDK HQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANRCRLENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. NCBI nr
Match: XP_004135555.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus] >XP_008445083.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis melo] >KGN65934.1 hypothetical protein Csa_023175 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIA  CR ENVAYLQCKQKDPNPEKCLDK HQVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. NCBI nr
Match: XP_038893587.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAV+A GDP PTSAVLMSSSKHIAN CR ENVAYLQCKQKDPNPEKCL+K HQVTRCV
Sbjct: 1  MASAVNAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLEKGHQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. NCBI nr
Match: XP_022958837.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata] >XP_023006426.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita maxima] >XP_023548394.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita pepo subsp. pepo] >KAG7013612.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.0 bits (354), Expect = 4.9e-30
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCK+KDPNPEKCLDK  QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTK+MDA
Sbjct: 61 LSLLKDLHQRCTKDMDA 77

[Close]

BLAST of PI0024364 vs. NCBI nr
Match: KAG6593937.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 6.4e-30
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          MASAVDA GDP PTSAVLMSSSKHIAN CR ENVAYLQCK+KDPNPEKCL+K  QVTRCV
Sbjct: 1  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60

Query: 61 LSLLKDLHQRCTKEMDA 78
          LSLLKDLHQRCTKEMDA
Sbjct: 61 LSLLKDLHQRCTKEMDA 77

[Close]

BLAST of PI0024364 vs. TAIR 10
Match: AT5G18800.1 (Cox19-like CHCH family protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.6e-26
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          M+SAVDA G+P PTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDK   VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLLKDLHQRCTKEMD 77
          L LLKDLHQ+C KEMD
Sbjct: 61 LGLLKDLHQKCQKEMD 76

[Close]

BLAST of PI0024364 vs. TAIR 10
Match: AT5G18800.2 (Cox19-like CHCH family protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.6e-26
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MASAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCV 60
          M+SAVDA G+P PTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDK   VTRCV
Sbjct: 1  MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61 LSLLKDLHQRCTKEMD 77
          L LLKDLHQ+C KEMD
Sbjct: 61 LGLLKDLHQKCQKEMD 76

[Close]

BLAST of PI0024364 vs. TAIR 10
Match: AT3G06310.1 (Cox19-like CHCH family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 3  SAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCVLS 62
          +AVD  G+P PTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+K   VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LLKDLHQRCTKEMDA 78
          LLKDLHQRC KEMDA
Sbjct: 65 LLKDLHQRCPKEMDA 79

[Close]

BLAST of PI0024364 vs. TAIR 10
Match: AT3G06310.3 (Cox19-like CHCH family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 3  SAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCVLS 62
          +AVD  G+P PTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+K   VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 LLKDLHQRCTKEMDA 78
          LLKDLHQRC KEMDA
Sbjct: 65 LLKDLHQRCPKEMDA 79

[Close]

BLAST of PI0024364 vs. TAIR 10
Match: AT3G06310.2 (Cox19-like CHCH family protein )

HSP 1 Score: 82.0 bits (201), Expect = 2.5e-16
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 3  SAVDAVGDPTPTSAVLMSSSKHIANNCRWENVAYLQCKQKDPNPEKCLDKCHQVTRCVLS 62
          +AVD  G+P PTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+K   VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 L 64
          L
Sbjct: 65 L 65

The following BLAST results are available for this feature:

BLAST of PI0024364 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGE7	6.4e-25	71.05	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis th...	[more]
Q9SQT4	2.1e-23	68.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis th...	[more]

BLAST of PI0024364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY30	2.8e-31	92.21	CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 S...	[more]
A0A1S3BBD5	2.8e-31	92.21	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo O...	[more]
A0A6J1KXR2	2.4e-30	89.61	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita...	[more]
A0A6J1H2X4	2.4e-30	89.61	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita...	[more]
A0A6J1KIR7	3.1e-30	89.61	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita...	[more]

BLAST of PI0024364 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906805.1	4.0e-32	93.51	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispid...	[more]
XP_004135555.1	5.8e-31	92.21	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]...	[more]
XP_038893587.1	5.8e-31	90.91	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa h...	[more]
XP_022958837.1	4.9e-30	89.61	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita m...	[more]
KAG6593937.1	6.4e-30	89.61	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbi...	[more]

BLAST of PI0024364 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18800.1	4.6e-26	71.05	Cox19-like CHCH family protein	[more]
AT5G18800.2	4.6e-26	71.05	Cox19-like CHCH family protein	[more]
AT3G06310.1	1.5e-24	68.00	Cox19-like CHCH family protein	[more]
AT3G06310.3	1.5e-24	68.00	Cox19-like CHCH family protein	[more]
AT3G06310.2	2.5e-16	62.30	Cox19-like CHCH family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016680	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8	PANTHER	PTHR13344	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 1..78
None	No IPR available	PANTHER	PTHR13344:SF2	CHCH-RELATED	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024364.1	PI0024364.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I