PI0024349 (gene) Melon (PI 482460) v1

Overview


Name	PI0024349
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 12125312 .. 12125797 (+)
RNA-Seq Expression	PI0024349
Synteny	PI0024349

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATTGTTCAAACGGGTTCCTTCGCCACCTCAGCAAATTCCAAATCCATCAAGGATATGCGGCGGAAGAGAACACTGATGATGATGAACTCTTCAAATACATTGACGAGGCAATCACCAAGCCAATGACTAGTGGATTTGAAGAAGTCATCAATGCACAAGTCAATTTGAAGAACTTTGCGATAGAACATGAGAAGCAGATTAAAGACTTGGAGACAAAAGTTGACAACTTCCATCAAGCCCAAAAAGACCAGCTCGCATTTGAAGTGGCGAGCTTGAAGGAGCAAAATAAGGCGATATTGGGTCTCATCAAGAAAGCTTCATTGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATTCACGCGGCAATCACAAGCCTCGTGCCTAAGCCTGCCATTCTGCCAGAATTTGAACAACCCCTTTCTGAAGATGAAGATGACGCCGCGGCTGGACCTTCCAACGCGACTATAAACTAA

mRNA sequence

ATGGTAGATTGTTCAAACGGGTTCCTTCGCCACCTCAGCAAATTCCAAATCCATCAAGGATATGCGGCGGAAGAGAACACTGATGATGATGAACTCTTCAAATACATTGACGAGGCAATCACCAAGCCAATGACTAGTGGATTTGAAGAAGTCATCAATGCACAAGTCAATTTGAAGAACTTTGCGATAGAACATGAGAAGCAGATTAAAGACTTGGAGACAAAAGTTGACAACTTCCATCAAGCCCAAAAAGACCAGCTCGCATTTGAAGTGGCGAGCTTGAAGGAGCAAAATAAGGCGATATTGGGTCTCATCAAGAAAGCTTCATTGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATTCACGCGGCAATCACAAGCCTCGTGCCTAAGCCTGCCATTCTGCCAGAATTTGAACAACCCCTTTCTGAAGATGAAGATGACGCCGCGGCTGGACCTTCCAACGCGACTATAAACTAA

Coding sequence (CDS)

ATGGTAGATTGTTCAAACGGGTTCCTTCGCCACCTCAGCAAATTCCAAATCCATCAAGGATATGCGGCGGAAGAGAACACTGATGATGATGAACTCTTCAAATACATTGACGAGGCAATCACCAAGCCAATGACTAGTGGATTTGAAGAAGTCATCAATGCACAAGTCAATTTGAAGAACTTTGCGATAGAACATGAGAAGCAGATTAAAGACTTGGAGACAAAAGTTGACAACTTCCATCAAGCCCAAAAAGACCAGCTCGCATTTGAAGTGGCGAGCTTGAAGGAGCAAAATAAGGCGATATTGGGTCTCATCAAGAAAGCTTCATTGCGGTCTGACAGGCAATACAAATCAATGATGAACTACATTCACGCGGCAATCACAAGCCTCGTGCCTAAGCCTGCCATTCTGCCAGAATTTGAACAACCCCTTTCTGAAGATGAAGATGACGCCGCGGCTGGACCTTCCAACGCGACTATAAACTAA

Protein sequence

MVDCSNGFLRHLSKFQIHQGYAAEENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDNFHQAQKDQLAFEVASLKEQNKAILGLIKKASLRSDRQYKSMMNYIHAAITSLVPKPAILPEFEQPLSEDEDDAAAGPSNATIN

Homology

[Close]

BLAST of PI0024349 vs. ExPASy TrEMBL
Match: A0A0A0KJB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09
Identity = 38/120 (31.67%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 28  DDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FHQ--- 87
           D+D   K+ D+ + KPM+SGFE+ I  Q N +    + +KQ++D + K+DN    HQ   
Sbjct: 45  DEDYTLKFFDDYVCKPMSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQVQI 104

Query: 88  ----AQKDQLAFEVASLKEQNKAILGLIKKASLRSDRQYKSMMNYIHAAITSLVPKPAIL 138
               A+  +L  +   LK QN+ I+ ++K+ +  +D Q+ S + Y+++++ S++P P  L
Sbjct: 105 EGLKAKMQELILQEQELKVQNQVIMEMVKQTTRWNDVQFTSALRYLYSSMCSIIPTPHTL 164

[Close]

BLAST of PI0024349 vs. ExPASy TrEMBL
Match: A0A5D3DS12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00130 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.3e-07
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 29  DDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FHQAQKD 88
           DDE FK+I     KPM  GFE++   Q NL+   +  +KQ+++LE ++DN    HQAQ D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 89  QLAFEVASLKEQNKAILGLIKKASLRSDR 115
            +  ++ SLK QN+A+  LIK+AS +++R
Sbjct: 71  IIEVDI-SLKTQNRALNTLIKRASSQTNR 97

[Close]

BLAST of PI0024349 vs. ExPASy TrEMBL
Match: A0A5D3C5U6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001830 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 32/81 (39.51%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 24  EENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDNF---H 83
           E+  D++ +FK+ID+ + KPM++GFE+VI  Q NL+   +  +KQ++D E K+ N    H
Sbjct: 105 EDGDDENYIFKFIDDYVCKPMSNGFEDVIQCQSNLQKMHLCCQKQLRDFEVKLQNINHHH 164

Query: 84  QAQKDQLAFEVASLKEQNKAI 102
           QAQ + L  E+  L+ QN+ +
Sbjct: 165 QAQIEGLKAEMQELRSQNQEL 185

[Close]

BLAST of PI0024349 vs. ExPASy TrEMBL
Match: A0A5D3D645 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold368G00010 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 24  EENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FH 83
           EE  D   +FK+ID+ I KP+  GFE+    Q NL+   +  +KQ+ DLE K+DN    +
Sbjct: 4   EEEVDAYYVFKFIDKFICKPLERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNASASN 63

Query: 84  QAQKDQLAFEVASLKEQNKAILGLIKKASLRS 113
           QAQ DQ   EV  LK Q K+   +++ +  ++
Sbjct: 64  QAQMDQFQVEVKKLKMQIKSSKNIMQPSKSKT 95

[Close]

BLAST of PI0024349 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 12 LSKFQIHQGYAAEENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKD 71
          L +    Q  AA E+ ++D  FK+I +   KP+  GF++V   QV+L+     HEKQI+D
Sbjct: 20 LKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQD 79

Query: 72 LETKVDNFHQ 82
          LE K+DN +Q
Sbjct: 80 LELKIDNCNQ 89

[Close]

BLAST of PI0024349 vs. NCBI nr
Match: KGN49653.1 (hypothetical protein Csa_018510 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-09
Identity = 38/120 (31.67%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 28  DDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FHQ--- 87
           D+D   K+ D+ + KPM+SGFE+ I  Q N +    + +KQ++D + K+DN    HQ   
Sbjct: 45  DEDYTLKFFDDYVCKPMSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQVQI 104

Query: 88  ----AQKDQLAFEVASLKEQNKAILGLIKKASLRSDRQYKSMMNYIHAAITSLVPKPAIL 138
               A+  +L  +   LK QN+ I+ ++K+ +  +D Q+ S + Y+++++ S++P P  L
Sbjct: 105 EGLKAKMQELILQEQELKVQNQVIMEMVKQTTRWNDVQFTSALRYLYSSMCSIIPTPHTL 164

[Close]

BLAST of PI0024349 vs. NCBI nr
Match: TYK26456.1 (hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 29  DDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FHQAQKD 88
           DDE FK+I     KPM  GFE++   Q NL+   +  +KQ+++LE ++DN    HQAQ D
Sbjct: 11  DDEYFKFIKNNFGKPMRDGFEDIFQCQANLQE-GMRSQKQLQNLELRIDNKDLRHQAQLD 70

Query: 89  QLAFEVASLKEQNKAILGLIKKASLRSDR 115
            +  ++ SLK QN+A+  LIK+AS +++R
Sbjct: 71  IIEVDI-SLKTQNRALNTLIKRASSQTNR 97

[Close]

BLAST of PI0024349 vs. NCBI nr
Match: TYK07283.1 (hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-06
Identity = 32/81 (39.51%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 24  EENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDNF---H 83
           E+  D++ +FK+ID+ + KPM++GFE+VI  Q NL+   +  +KQ++D E K+ N    H
Sbjct: 105 EDGDDENYIFKFIDDYVCKPMSNGFEDVIQCQSNLQKMHLCCQKQLRDFEVKLQNINHHH 164

Query: 84  QAQKDQLAFEVASLKEQNKAI 102
           QAQ + L  E+  L+ QN+ +
Sbjct: 165 QAQIEGLKAEMQELRSQNQEL 185

[Close]

BLAST of PI0024349 vs. NCBI nr
Match: KAA0049656.1 (hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK19034.1 hypothetical protein E5676_scaffold368G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-06
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 24  EENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKDLETKVDN---FH 83
           EE  D   +FK+ID+ I KP+  GFE+    Q NL+   +  +KQ+ DLE K+DN    +
Sbjct: 4   EEEVDAYYVFKFIDKFICKPLERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNASASN 63

Query: 84  QAQKDQLAFEVASLKEQNKAILGLIKKASLRS 113
           QAQ DQ   EV  LK Q K+   +++ +  ++
Sbjct: 64  QAQMDQFQVEVKKLKMQIKSSKNIMQPSKSKT 95

[Close]

BLAST of PI0024349 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 7.8e-05
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 12 LSKFQIHQGYAAEENTDDDELFKYIDEAITKPMTSGFEEVINAQVNLKNFAIEHEKQIKD 71
          L +    Q  AA E+ ++D  FK+I +   KP+  GF++V   QV+L+     HEKQI+D
Sbjct: 20 LKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWRHEKQIQD 79

Query: 72 LETKVDNFHQ 82
          LE K+DN +Q
Sbjct: 80 LELKIDNCNQ 89

The following BLAST results are available for this feature:

BLAST of PI0024349 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024349 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB9	1.5e-09	31.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1	[more]
A0A5D3DS12	5.3e-07	42.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C5U6	1.2e-06	39.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D645	2.6e-06	38.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U0L9	3.8e-05	41.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0024349 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49653.1	3.1e-09	31.67	hypothetical protein Csa_018510 [Cucumis sativus]	[more]
TYK26456.1	1.1e-06	42.70	hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]	[more]
TYK07283.1	2.4e-06	39.51	hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]	[more]
KAA0049656.1	5.4e-06	38.04	hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK190...	[more]
KAA0047757.1	7.8e-05	41.43	hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023...	[more]

BLAST of PI0024349 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024349.1	PI0024349.1	mRNA