PI0024339 (gene) Melon (PI 482460) v1

Overview


Name	PI0024339
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	high mobility group B protein 15
Location	chr05: 16472968 .. 16475892 (-)
RNA-Seq Expression	PI0024339
Synteny	PI0024339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGTGGCTTCTAACTGTGTTCCATACCCACCACCGCAAACAACATATGAAGATATCATAGCCAATTCAAAGATCTTTATGACAGCCTTGGAAAAGCTCCACTCCCTCATGGGAACTAAGTTCATGTATATTTCTTAAACATCTCCTCCTTTACCTGTGGAGTGAACATTACAATTCATTTAACGGACATTGCTCAAATTTGTTTAAATGGAGATAACAAGTCTTTGTAAATCAATATTAGTAAAGCCAGGCGCTGGCGCTACCTTGTATTCCTGGTCTTGACATGGAAGTAAAAGTTGATTTTGCTTTTTTGAAATTTGTTTACGGACTCATTATGTTTCCTTGTAGGAGCACCTATATGTTCTCCATTTTTTTAGTTTTGCAATTAGATATATATATTTTTTCACTTTTGGCTCCCAAAAACGCAGGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGAATCGAGAAGGTAAAATTGACTTGCTATGAATCTTATGATCAATATTTTCATATCTGAAATTTGATGAATGAACTTGGAGTTGGAACTTGTTTTTTATATCTTTTGATGGCAAATATAAGGGCGGTTATTTGAGCTTATTTCCAACTTTTTCATTTACTTTCATGATTGTTAAATATTACTGCACTTGGAGATCATTAAAAGGCTGAGGTTTTTTGTATTATTTGAGTACACATTTTGATCCTTACTGAATGATGTCAGTCTGAGTGTGCTTATCAGTTAGTATTGAATTTGATTTCTTTATTTAACGAAGCTTCTAGTGTCTAAAAGCATGATAAATATTCTCACCTGATGAGTTATAGGCTTTTCAGTTGAATGTGTTATTAGAGGGTTGGTGAAGTGCAAATCAGGGCCTTACCAAAAGCTGTCACAGCAGCGATTGCTGTTCCGTTGCTGAACATCAAGGATCTAGTCTACATCTATGCCGGAAGTTGTATTTTCTTTTTCCAAACAGGATTAAATGCCACATAGGGCTCCTTTTGTTATGATTTTGGACTCATTTACAATGGTGTTGTAGCATGCTATTAGATTTGTTTGCTGTTTTTGCTTGTACCATGTTCTTTACTTCTTCATATGGATAAAAGTGAGAATCATTCTAACTGACATTTTAAAGCATATTATTTGTTACAAGTTCATATAAACCCACAGCATGATCATGTAACAATCTTGATTTTACAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTTAATTTTCCTTCGACGGCCACCAATGCTTCTTTTGTGTTGAGGAAGTACTATATTTCATTGCTTCATCATTTCGAACAGATTTACTTCTTTAAAGCCGTAGGATGGACACCAGTAACTTCCGGCAAGTGCTAACAGAGTACCTTCATTTTTTTCCTGAAGAAAATGCCATATTCTGCTATTGATTTTTCTATCATTACAATCTTTCAGATTCCTCTCCATGCCCAAGTGCGTCGGCAATTCCTATGCAAGGGGTGACTTCTATGTTGCCGCCATCAGATAATCAGGCAGCATCCCACCAGCCACGGAGCACAGCGACTGAACTTCCAGCAGGTGTATTCTTTGGTCCTTCAGAAATATACTCGGAATATAAGTTAGGGAACAATGTATTTGCATGCTTCAATGCCTTCTTTACAAGTTCATGTCTTATAAATGCTGCTATTTCTTTCTGTGCTTGTATTTTATAGTTGATGATACTCAGTTTCACACGTTATTTACTTATTAGAGATAATTCCTTTCACCCTACAGTTTCTCCGAGTTCAACATCACCGGTAGGAGGGTTTCCAGTGATCGGAGTAATTGACGGAAAATTTGATAGCGGATATCTTGTTACCGTTACTGTAGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTGAGCAACATTCTCAGCCACAAGTGTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCCACCCCCACCACACCAAATGCTCATCGCCGCCGTCGTCGGAAGAAATCTGAGATAAAGCGAAGGGATCCCGCTCATCCAAAGCCAAACAGAAGTGGTTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCGTTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGGGACCTTTGGAATAAACTAAAAGAATCTGAAAGAACAGTAAGGATTGCATCACTCTTTTATCTCTTTATGCTTTAAGGATCAGTCACATCTTTTGTAGTAGCTGGTGTCGATAATTTTTCTCTACTTGCAGGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGTGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTTCCCTTACAGCAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGGTGACAAAAACGAAGAAACTGAGGGCGGTGAGTCTCAAACACCAGATAATGATGCAAGCTATGTGGAAGGCGACTCTGGAGAGTATAAAACAGAAGAGAAGGAGGAAGATGAGGAGGAAGATGAGGAGGACGACGAAGAGGATGAGGAGGACGACTCAGAAGAAGATGCATCTCCACAACGAATTGGTAATGTGGACGTCAACATTTTGGTTGAGGAAGAACAGTGCGAGACGAGAACAGGCGTAGAGAATGTTAGTAAAGAGAGTAGCACGGTTGATGACAAGAAAGAAGTTTTAGCTGGGGATTCGGTAATGGGGGAGGTGGAGGCAAAGGAAGAACCAGAACCAACAACAGCAGCCATTAGAGAAGATTAA

mRNA sequence

ATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGTGGCTTCTAACTGTGTTCCATACCCACCACCGCAAACAACATATGAAGATATCATAGCCAATTCAAAGATCTTTATGACAGCCTTGGAAAAGCTCCACTCCCTCATGGGAACTAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGAATCGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTTAATTTTCCTTCGACGGCCACCAATGCTTCTTTTGTGTTGAGGAAGTACTATATTTCATTGCTTCATCATTTCGAACAGATTTACTTCTTTAAAGCCGTAGGATGGACACCAGTAACTTCCGATTCCTCTCCATGCCCAAGTGCGTCGGCAATTCCTATGCAAGGGGTGACTTCTATGTTGCCGCCATCAGATAATCAGGCAGCATCCCACCAGCCACGGAGCACAGCGACTGAACTTCCAGCAGTTTCTCCGAGTTCAACATCACCGGTAGGAGGGTTTCCAGTGATCGGAGTAATTGACGGAAAATTTGATAGCGGATATCTTGTTACCGTTACTGTAGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTGAGCAACATTCTCAGCCACAAGTGTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCCACCCCCACCACACCAAATGCTCATCGCCGCCGTCGTCGGAAGAAATCTGAGATAAAGCGAAGGGATCCCGCTCATCCAAAGCCAAACAGAAGTGGTTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCGTTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGGGACCTTTGGAATAAACTAAAAGAATCTGAAAGAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGTGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTTCCCTTACAGCAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGGTGACAAAAACGAAGAAACTGAGGGCGGTGAGTCTCAAACACCAGATAATGATGCAAGCTATGTGGAAGGCGACTCTGGAGAGTATAAAACAGAAGAGAAGGAGGAAGATGAGGAGGAAGATGAGGAGGACGACGAAGAGGATGAGGAGGACGACTCAGAAGAAGATGCATCTCCACAACGAATTGGTAATGTGGACGTCAACATTTTGGTTGAGGAAGAACAGTGCGAGACGAGAACAGGCGTAGAGAATGTTAGTAAAGAGAGTAGCACGGTTGATGACAAGAAAGAAGTTTTAGCTGGGGATTCGGTAATGGGGGAGGTGGAGGCAAAGGAAGAACCAGAACCAACAACAGCAGCCATTAGAGAAGATTAA

Coding sequence (CDS)

ATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGTGGCTTCTAACTGTGTTCCATACCCACCACCGCAAACAACATATGAAGATATCATAGCCAATTCAAAGATCTTTATGACAGCCTTGGAAAAGCTCCACTCCCTCATGGGAACTAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGAATCGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTTAATTTTCCTTCGACGGCCACCAATGCTTCTTTTGTGTTGAGGAAGTACTATATTTCATTGCTTCATCATTTCGAACAGATTTACTTCTTTAAAGCCGTAGGATGGACACCAGTAACTTCCGATTCCTCTCCATGCCCAAGTGCGTCGGCAATTCCTATGCAAGGGGTGACTTCTATGTTGCCGCCATCAGATAATCAGGCAGCATCCCACCAGCCACGGAGCACAGCGACTGAACTTCCAGCAGTTTCTCCGAGTTCAACATCACCGGTAGGAGGGTTTCCAGTGATCGGAGTAATTGACGGAAAATTTGATAGCGGATATCTTGTTACCGTTACTGTAGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTGAGCAACATTCTCAGCCACAAGTGTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCCACCCCCACCACACCAAATGCTCATCGCCGCCGTCGTCGGAAGAAATCTGAGATAAAGCGAAGGGATCCCGCTCATCCAAAGCCAAACAGAAGTGGTTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCGTTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGGGACCTTTGGAATAAACTAAAAGAATCTGAAAGAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGTGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTTCCCTTACAGCAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGGTGACAAAAACGAAGAAACTGAGGGCGGTGAGTCTCAAACACCAGATAATGATGCAAGCTATGTGGAAGGCGACTCTGGAGAGTATAAAACAGAAGAGAAGGAGGAAGATGAGGAGGAAGATGAGGAGGACGACGAAGAGGATGAGGAGGACGACTCAGAAGAAGATGCATCTCCACAACGAATTGGTAATGTGGACGTCAACATTTTGGTTGAGGAAGAACAGTGCGAGACGAGAACAGGCGTAGAGAATGTTAGTAAAGAGAGTAGCACGGTTGATGACAAGAAAGAAGTTTTAGCTGGGGATTCGGTAATGGGGGAGGTGGAGGCAAAGGAAGAACCAGAACCAACAACAGCAGCCATTAGAGAAGATTAA

Protein sequence

MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDEEEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETRTGVENVSKESSTVDDKKEVLAGDSVMGEVEAKEEPEPTTAAIRED

Homology

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BLAST of PI0024339 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.0e-101
Identity = 229/427 (53.63%), Postives = 286/427 (66.98%), Query Frame = 0


Query: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 78
           MAS+S      +P+  V   CV    P+ TYE ++A+ ++FMT+LE+LHSL+GTKFM+PI
Sbjct: 1   MASSSCLKQGSVPMNNV---CV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 138
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLRKYY SLL++
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 139 FEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVS 198
           +EQIYFF++ G  P   DS   PSA    +QG  ++ P  + QA +  P+        + 
Sbjct: 121 YEQIYFFRSNGQIP--PDSMQSPSARPCFIQG--AIRPSQELQALTFTPQPKINTAEFLG 180

Query: 199 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APEQHSQPQVLQPVGAFA 258
            S    + G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P+     Q  Q      
Sbjct: 181 GS----LAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQ-----Q 240

Query: 259 KDGATPTTPN------------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARL 318
             G  P T N              RRRRRKKSEIKRRDP HPKPNRSGYNFFFAEQHARL
Sbjct: 241 SHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARL 300

Query: 319 KPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISD 378
           KPL+PGKDR+ISRMIG+LWNKL E E+ +YQ KAM+DKERYR EM DYREK + GQ+IS+
Sbjct: 301 KPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISN 360

Query: 379 AVPLQQRLPEPDLNMVYGD-KNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDEEEDE 432
           AVPLQQRLPE +++M   D   +E E  +           EGDS     E +  D++  E
Sbjct: 361 AVPLQQRLPEQNVDMAEADLPIDEVEEDDE----------EGDSSGSSGESEPHDDQSIE 398

[Close]

BLAST of PI0024339 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 148/322 (45.96%), Postives = 199/322 (61.80%), Query Frame = 0


Query: 42  YPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 101
           YP P   +E ++ +S +F   L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 102 VIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVG--WTPV-TSDSS 161
           V+ E++W+EV  VF F +T T+ASFVLRK+Y++LL H+EQ++ F A G    P+ T  ++
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHAN 146

Query: 162 PCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKF 221
           P  S        +    PPS     +H P          S  S+S    F  IG I+GKF
Sbjct: 147 PSTSKE----MALVEYTPPSIRYHNTHPP----------SQGSSS----FTAIGTIEGKF 206

Query: 222 DSGYLVTVTVGTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRR--RKK 281
           D GYLV V +G+E L GVLY +    +QP       A   +   P      RRRR  +++
Sbjct: 207 DCGYLVKVKLGSEILNGVLYHS----AQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRR 266

Query: 282 SEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQ 341
              +R DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++IG+ W+ L   ER VYQ
Sbjct: 267 RSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQ 326

Query: 342 EKAMKDKERYRIEMVDYREKLR 359
           +  +KDKERY+ E+ +YRE LR
Sbjct: 327 DIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of PI0024339 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-63
Identity = 139/320 (43.44%), Postives = 186/320 (58.13%), Query Frame = 0


Query: 49  YEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+D++ NS +F   L     L      +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPM 168
           KEV   F+FP+T T+ASFVLRKYY+  L   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTV 228
                  P S  Q+     +S A E P        P  G+ V G IDGKFDSGYLVT+ +
Sbjct: 156 -------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKL 215

Query: 229 GTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNA----HRRRRRKKSEIKRRDP 288
           G+++LKGVLY  P+  SQ Q             T  TP+A     +RR RKKS++   D 
Sbjct: 216 GSQELKGVLYHIPQTPSQSQ------------QTMETPSAIVQSSQRRHRKKSKLAVVDT 275

Query: 289 AHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKE 348
             PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W+ L ESE+ VYQ+K +KD E
Sbjct: 276 QKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVE 315

Query: 349 RYRIEMVDYREKLRTGQIIS 365
           RYRIEM++Y+    +G   S
Sbjct: 336 RYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of PI0024339 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 2.7e-46
Identity = 120/319 (37.62%), Postives = 174/319 (54.55%), Query Frame = 0


Query: 49  YEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+DI+ N ++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPM 168
           KEV   FNF +T TN++FVLRK Y+ +L  FE +Y+F+A    P+   S+      A+ +
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA----PL---STFWEKEKALKL 149

Query: 169 QGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTV 228
                ++  S N+    Q     T                 + G+IDGKF+SGYL++  V
Sbjct: 150 -----LIEKSANRDKDSQELKPGT----------------VITGIIDGKFESGYLISTKV 209

Query: 229 GTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDP-AHP 288
           G+EKLKG+LY     H  P+                      +R +KK++  + D    P
Sbjct: 210 GSEKLKGMLY-----HISPET---------------------KRGKKKAKSSQGDSHKPP 269

Query: 289 KPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYR 348
           K  R+GYNFF AEQ  R+K    G+     +  G++W  L ES+R VY EK+ +D +RY+
Sbjct: 270 KRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYK 294

Query: 349 IEMVDYREKL--RTGQIIS 365
           +E++ YR  +  R  +I++
Sbjct: 330 MEILQYRSLMESRVAEIVA 294

[Close]

BLAST of PI0024339 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-15
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 59  FMTALEKLHSLMGTKF-MIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNF 118
           F+  L + H   G+ F  IP +GGKELDLH L+  VT+ GG  KV  + +W E+   FNF
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 119 PSTATNASFVLRKYYISLLHHFEQIYFF 146
           P + +NA+F L++YY+  L  +E+++ F
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHF 106

[Close]

BLAST of PI0024339 vs. ExPASy TrEMBL
Match: A0A0A0LL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 4.8e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 180

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 181 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 241 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 420

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 421 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 480

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 481 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 509

[Close]

BLAST of PI0024339 vs. ExPASy TrEMBL
Match: A0A5A7SQV2 (High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001100 PE=4 SV=1)

HSP 1 Score: 889.4 bits (2297), Expect = 6.9e-255
Identity = 470/488 (96.31%), Postives = 475/488 (97.34%), Query Frame = 0


Query: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 78
           MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 138
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 120

Query: 139 FEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVS 198
           FEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDNQAASHQPRS ATELPAVS
Sbjct: 121 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPRSIATELPAVS 180

Query: 199 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQHSQPQVLQPVGAFAK 258
            SSTSP GGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQ SQPQVLQPVGAFAK
Sbjct: 181 LSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQPSQPQVLQPVGAFAK 240

Query: 259 DGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISR 318
           DG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISR
Sbjct: 241 DGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISR 300

Query: 319 MIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDL 378
           MIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDL
Sbjct: 301 MIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDL 360

Query: 379 NMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDEEEDEEDDEEDEEDDSEED 438
           NMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK+EDEE+DEED   +EEDDSEED
Sbjct: 361 NMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEKDEDEEDDEED---EEEDDSEED 420

Query: 439 ASPQRIGNVDVNILVEEEQCETRTGVENVSKESSTVDDKKEVLAGDSVMGEVEAKEEPEP 498
           ASPQ IGNVDVNILVEEEQCETRTGVENV KESSTV DKKEVLAGDSVM EVEAKEEPEP
Sbjct: 421 ASPQGIGNVDVNILVEEEQCETRTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEEPEP 480

Query: 499 TTAAIRED 507
           TTAAIRED
Sbjct: 481 TTAAIRED 485

[Close]

BLAST of PI0024339 vs. ExPASy TrEMBL
Match: A0A6J1CAX2 (high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 2.1e-219
Identity = 423/516 (81.98%), Postives = 447/516 (86.63%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           M+EEERTEAGWGSRKELTMASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYY+SLLHHFEQI+FFKAVGWTP+ SDS  CPS + IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 181 QAA-SHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 240
           QAA S QPR++ TELPAV+PSS S   GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVLYQ
Sbjct: 181 QAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQ 240

Query: 241 A-PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
           + PEQ +Q QVLQP G FAKDGAT   PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 241 SPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300

Query: 301 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 360
           AEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM DYREKLR
Sbjct: 301 AEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLR 360

Query: 361 TGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDNDASYVEGDSGEYKTEEKE 420
           TGQ+ISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPD+D SYVEGDSGEYKTEEKE
Sbjct: 361 TGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEKE 420

Query: 421 EDEEEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEE-QCETRTGVENVSKESST--V 480
           EDEEE           DSEEDASPQR+GNVDVN+LVEEE   ETR   E+V KESST  V
Sbjct: 421 EDEEE-----------DSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVV 480

Query: 481 DDKKEVLAGDSVMGEVEAKEEPE----PTTAAIRED 507
            D+KEV   DS+M   EAKEEPE    P T AIRED
Sbjct: 481 GDEKEVFTRDSLM--EEAKEEPEPPPPPPTTAIRED 502

[Close]

BLAST of PI0024339 vs. ExPASy TrEMBL
Match: A0A1S3C575 (high mobility group B protein 15 OS=Cucumis melo OX=3656 GN=LOC103497004 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 2.1e-219
Identity = 427/490 (87.14%), Postives = 439/490 (89.59%), Query Frame = 0


Query: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTY--EDIIANSKIFMTALEKLHSLMGTKFMI 78
           MASTSFAGGKQLPVIEVASNCVPYPPPQTT   + +IA   +   A  +  SL     +I
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTTALPKAVIA---VIAVAAHQGFSLHLRVHII 60

Query: 79  PIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLL 138
           P     E D   +         I +VIRERRWKEVTSVFNFPSTATNASFVLRKYYISLL
Sbjct: 61  P-----EHDHVTIL--------ILQVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLL 120

Query: 139 HHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPA 198
           HHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDNQAASHQPRS ATELPA
Sbjct: 121 HHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPRSIATELPA 180

Query: 199 VSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQHSQPQVLQPVGAF 258
           VS SSTSP GGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQ SQPQVLQPVGAF
Sbjct: 181 VSLSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQPSQPQVLQPVGAF 240

Query: 259 AKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREI 318
           AKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREI
Sbjct: 241 AKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREI 300

Query: 319 SRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEP 378
           SRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEP
Sbjct: 301 SRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEP 360

Query: 379 DLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDEEEDEEDDEEDEEDDSE 438
           DLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK+EDEE+DEED   +EEDDSE
Sbjct: 361 DLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEKDEDEEDDEED---EEEDDSE 420

Query: 439 EDASPQRIGNVDVNILVEEEQCETRTGVENVSKESSTVDDKKEVLAGDSVMGEVEAKEEP 498
           EDASPQ IGNVDVNILVEEEQCETRTGVENV KESSTV DKKEVLAGDSVM EVEAKEEP
Sbjct: 421 EDASPQGIGNVDVNILVEEEQCETRTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEEP 471

Query: 499 EPTTAAIRED 507
           EPTTAAIRED
Sbjct: 481 EPTTAAIRED 471

[Close]

BLAST of PI0024339 vs. ExPASy TrEMBL
Match: A0A6J1CAI2 (high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.6e-217
Identity = 423/523 (80.88%), Postives = 447/523 (85.47%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           M+EEERTEAGWGSRKELTMASTSF GGK LPVIE +SNCV YPPPQ TYEDII N KIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYY+SLLHHFEQI+FFKAVGWTP+ SDS  CPS + IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 181 QAA-SHQPRSTATELPA-------VSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEK 240
           QAA S QPR++ TELPA       V+PSS S   GFPVIGVIDGKFDSGYLVTVT+G+EK
Sbjct: 181 QAAMSQQPRTSTTELPADSTFLPTVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEK 240

Query: 241 LKGVLYQA-PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNR 300
           LKGVLYQ+ PEQ +Q QVLQP G FAKDGAT   PNAHRRRRRKKSEIKRRDPAHPKPNR
Sbjct: 241 LKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNR 300

Query: 301 SGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMV 360
           SGYNFFFAEQHARLKPLYPGKDREISRMIG+LWNKL ES+RTVYQEKAMKDKERYRIEM 
Sbjct: 301 SGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEME 360

Query: 361 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDNDASYVEGDSGE 420
           DYREKLRTGQ+ISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPD+D SYVEGDSGE
Sbjct: 361 DYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGE 420

Query: 421 YKTEEKEEDEEEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEE-QCETRTGVENVSK 480
           YKTEEKEEDEEE           DSEEDASPQR+GNVDVN+LVEEE   ETR   E+V K
Sbjct: 421 YKTEEKEEDEEE-----------DSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRK 480

Query: 481 ESST--VDDKKEVLAGDSVMGEVEAKEEPE----PTTAAIRED 507
           ESST  V D+KEV   DS+M   EAKEEPE    P T AIRED
Sbjct: 481 ESSTVVVGDEKEVFTRDSLM--EEAKEEPEPPPPPPTTAIRED 509

[Close]

BLAST of PI0024339 vs. NCBI nr
Match: XP_011649091.1 (high mobility group B protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 69  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 128

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 129 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 188

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 189 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 248

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 249 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 308

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 309 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 368

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 369 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 428

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 429 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 488

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 489 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 548

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 549 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 577

[Close]

BLAST of PI0024339 vs. NCBI nr
Match: XP_004139006.2 (high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_011649099.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737002.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737003.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737004.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737005.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737006.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_031737007.1 high mobility group B protein 15 isoform X5 [Cucumis sativus] >KGN61472.1 hypothetical protein Csa_006764 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 180

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 181 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 241 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 420

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 421 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 480

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 481 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 509

[Close]

BLAST of PI0024339 vs. NCBI nr
Match: XP_011649095.1 (high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 high mobility group B protein 15 isoform X4 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 38  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 97

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 98  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 157

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 158 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 217

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 218 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 277

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 278 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 337

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 338 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 397

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 398 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 457

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 458 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 517

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 518 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 546

[Close]

BLAST of PI0024339 vs. NCBI nr
Match: XP_011649092.1 (high mobility group B protein 15 isoform X3 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 64  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 123

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 124 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 183

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 184 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 243

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 244 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 303

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 304 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 363

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 364 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 423

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 424 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 483

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 484 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 543

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 544 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 572

[Close]

BLAST of PI0024339 vs. NCBI nr
Match: XP_011649090.1 (high mobility group B protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264
Identity = 491/513 (95.71%), Postives = 494/513 (96.30%), Query Frame = 0


Query: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60
           MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM
Sbjct: 71  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 130

Query: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120
           TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 131 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 190

Query: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDN 180
           ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIP QGVTSMLPPSDN
Sbjct: 191 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 250

Query: 181 QAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240
           QAASHQP+STATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 251 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 310

Query: 241 PEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 300
           PEQ SQPQVLQPVGAFAKDG+TPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE
Sbjct: 311 PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 370

Query: 301 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 360
           QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG
Sbjct: 371 QHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTG 430

Query: 361 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDE 420
           QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPD+D SYVEGDSGEYKTEEK    
Sbjct: 431 QIISDAVPLQQRLPEPDLNMVYGDKNEETEGGESQTPDHDTSYVEGDSGEYKTEEK---- 490

Query: 421 EEDEEDDEEDEEDDSEEDASPQRIGNVDVNILVEEEQCETR-TGVENVSKESSTVDDKKE 480
           EEDEEDDEEDEEDDSEEDASPQ IGNVDVNILVEEEQCETR TGVENV KESSTV DKKE
Sbjct: 491 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKE 550

Query: 481 VLAGDSVMGEVEAKEEPEPTT------AAIRED 507
           VLAGDSVM EVEAKE PEPTT      AAIRED
Sbjct: 551 VLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 579

[Close]

BLAST of PI0024339 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 369.8 bits (948), Expect = 3.6e-102
Identity = 229/427 (53.63%), Postives = 286/427 (66.98%), Query Frame = 0


Query: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 78
           MAS+S      +P+  V   CV    P+ TYE ++A+ ++FMT+LE+LHSL+GTKFM+PI
Sbjct: 1   MASSSCLKQGSVPMNNV---CV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 138
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLRKYY SLL++
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 139 FEQIYFFKAVGWTPVTSDSSPCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVS 198
           +EQIYFF++ G  P   DS   PSA    +QG  ++ P  + QA +  P+        + 
Sbjct: 121 YEQIYFFRSNGQIP--PDSMQSPSARPCFIQG--AIRPSQELQALTFTPQPKINTAEFLG 180

Query: 199 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APEQHSQPQVLQPVGAFA 258
            S    + G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P+     Q  Q      
Sbjct: 181 GS----LAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQ-----Q 240

Query: 259 KDGATPTTPN------------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARL 318
             G  P T N              RRRRRKKSEIKRRDP HPKPNRSGYNFFFAEQHARL
Sbjct: 241 SHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARL 300

Query: 319 KPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISD 378
           KPL+PGKDR+ISRMIG+LWNKL E E+ +YQ KAM+DKERYR EM DYREK + GQ+IS+
Sbjct: 301 KPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISN 360

Query: 379 AVPLQQRLPEPDLNMVYGD-KNEETEGGESQTPDNDASYVEGDSGEYKTEEKEEDEEEDE 432
           AVPLQQRLPE +++M   D   +E E  +           EGDS     E +  D++  E
Sbjct: 361 AVPLQQRLPEQNVDMAEADLPIDEVEEDDE----------EGDSSGSSGESEPHDDQSIE 398

[Close]

BLAST of PI0024339 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 260.8 bits (665), Expect = 2.3e-69
Identity = 148/322 (45.96%), Postives = 199/322 (61.80%), Query Frame = 0


Query: 42  YPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 101
           YP P   +E ++ +S +F   L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 102 VIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVG--WTPV-TSDSS 161
           V+ E++W+EV  VF F +T T+ASFVLRK+Y++LL H+EQ++ F A G    P+ T  ++
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHAN 146

Query: 162 PCPSASAIPMQGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKF 221
           P  S        +    PPS     +H P          S  S+S    F  IG I+GKF
Sbjct: 147 PSTSKE----MALVEYTPPSIRYHNTHPP----------SQGSSS----FTAIGTIEGKF 206

Query: 222 DSGYLVTVTVGTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRR--RKK 281
           D GYLV V +G+E L GVLY +    +QP       A   +   P      RRRR  +++
Sbjct: 207 DCGYLVKVKLGSEILNGVLYHS----AQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRR 266

Query: 282 SEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQ 341
              +R DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++IG+ W+ L   ER VYQ
Sbjct: 267 RSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQ 326

Query: 342 EKAMKDKERYRIEMVDYREKLR 359
           +  +KDKERY+ E+ +YRE LR
Sbjct: 327 DIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of PI0024339 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 245.7 bits (626), Expect = 7.7e-65
Identity = 139/320 (43.44%), Postives = 186/320 (58.13%), Query Frame = 0


Query: 49  YEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+D++ NS +F   L     L      +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPM 168
           KEV   F+FP+T T+ASFVLRKYY+  L   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTV 228
                  P S  Q+     +S A E P        P  G+ V G IDGKFDSGYLVT+ +
Sbjct: 156 -------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKL 215

Query: 229 GTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNA----HRRRRRKKSEIKRRDP 288
           G+++LKGVLY  P+  SQ Q             T  TP+A     +RR RKKS++   D 
Sbjct: 216 GSQELKGVLYHIPQTPSQSQ------------QTMETPSAIVQSSQRRHRKKSKLAVVDT 275

Query: 289 AHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKE 348
             PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W+ L ESE+ VYQ+K +KD E
Sbjct: 276 QKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVE 315

Query: 349 RYRIEMVDYREKLRTGQIIS 365
           RYRIEM++Y+    +G   S
Sbjct: 336 RYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of PI0024339 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-47
Identity = 120/319 (37.62%), Postives = 174/319 (54.55%), Query Frame = 0


Query: 49  YEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 108
           Y+DI+ N ++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPM 168
           KEV   FNF +T TN++FVLRK Y+ +L  FE +Y+F+A    P+   S+      A+ +
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA----PL---STFWEKEKALKL 149

Query: 169 QGVTSMLPPSDNQAASHQPRSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTV 228
                ++  S N+    Q     T                 + G+IDGKF+SGYL++  V
Sbjct: 150 -----LIEKSANRDKDSQELKPGT----------------VITGIIDGKFESGYLISTKV 209

Query: 229 GTEKLKGVLYQAPEQHSQPQVLQPVGAFAKDGATPTTPNAHRRRRRKKSEIKRRDP-AHP 288
           G+EKLKG+LY     H  P+                      +R +KK++  + D    P
Sbjct: 210 GSEKLKGMLY-----HISPET---------------------KRGKKKAKSSQGDSHKPP 269

Query: 289 KPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYR 348
           K  R+GYNFF AEQ  R+K    G+     +  G++W  L ES+R VY EK+ +D +RY+
Sbjct: 270 KRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYK 294

Query: 349 IEMVDYREKL--RTGQIIS 365
           +E++ YR  +  R  +I++
Sbjct: 330 MEILQYRSLMESRVAEIVA 294

The following BLAST results are available for this feature:

BLAST of PI0024339 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAT6	5.0e-101	53.63	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9SGS2	3.3e-68	45.96	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9LTT3	1.1e-63	43.44	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	2.7e-46	37.62	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	7.2e-15	42.05	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of PI0024339 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL59	4.8e-264	95.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1	[more]
A0A5A7SQV2	6.9e-255	96.31	High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CAX2	2.1e-219	81.98	high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3C575	2.1e-219	87.14	high mobility group B protein 15 OS=Cucumis melo OX=3656 GN=LOC103497004 PE=4 SV...	[more]
A0A6J1CAI2	2.6e-217	80.88	high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of PI0024339 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649091.1	9.9e-264	95.71	high mobility group B protein 15 isoform X2 [Cucumis sativus]	[more]
XP_004139006.2	9.9e-264	95.71	high mobility group B protein 15 isoform X5 [Cucumis sativus] >XP_011649099.1 hi...	[more]
XP_011649095.1	9.9e-264	95.71	high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 hi...	[more]
XP_011649092.1	9.9e-264	95.71	high mobility group B protein 15 isoform X3 [Cucumis sativus]	[more]
XP_011649090.1	9.9e-264	95.71	high mobility group B protein 15 isoform X1 [Cucumis sativus]	[more]

BLAST of PI0024339 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04880.1	3.6e-102	53.63	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G76110.1	2.3e-69	45.96	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	7.7e-65	43.44	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	1.9e-47	37.62	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 336..356
None	No IPR available	COILS	Coil	Coil	coord: 411..438
None	No IPR available	SMART	SM01014	ARID_2	coord: 50..140 e-value: 4.4E-29 score: 112.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..477
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..294
None	No IPR available	PANTHER	PTHR46691:SF3	HIGH MOBILITY GROUP B PROTEIN 15	coord: 8..427
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 8..427
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 287..350 e-value: 4.15847E-20 score: 82.2905
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 55..140 e-value: 1.31597E-50 score: 165.515
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 54..145 e-value: 4.6E-30 score: 115.9
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 57..140 e-value: 2.0E-17 score: 63.6
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 53..144 score: 26.123476
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 286..355 e-value: 2.6E-17 score: 73.5
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 287..354 e-value: 1.9E-13 score: 50.6
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 287..354 score: 14.925637
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 271..366 e-value: 4.6E-20 score: 73.8
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 280..359
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 46..147 e-value: 2.7E-27 score: 96.8
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 50..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024339.1	PI0024339.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding