PI0024324 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTAATTCATTCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAAACAGTCTGAAAAATTTCTCCCCTCATTTTACTTCACCACTCCAAATTCTTCACAATGCCTCGAATCAGCAACAACCTCGTCGGAATCCTCAACTTCGTCACCTTCTTACTCTCGATCCCAATTCTCTGGGCCGGCGTTTGGCTCAGCAAACAAGGAAGCACCGAATGTGAGAAGTATTTAGACAAACCCATTATCATAATCGGCGTTTTTCTCTTGTTGGTTTCTCTCGCTGGTCTTCTCGGTGCTTGCTGTAGAATCTCATGGCTTTTATGGGTGTACCTTCTTGTATGTTTGTTCTTATTGTTATTCTCTTTGCTTTCACCATTTTCGCTTTTGTCGTCACTAACAAAGGCGCCGGTGAGGTCTTGTCTAATCGGGGTTATAAGGAGTATAGGCTTGGAGATTACTCTGGTTGGTTGCAAAAGAGAGTGAACAATAATAAAAATTGGAATAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCTACCTTTGCTGATAAGTATATTAAGGATACTGTTGAACAGTTTTATCAGGAGAATTTGTCTGCTCTTCAGGTATGATCCAAACCAATGAATTTGGGAATTGGTTTGGTGTTTTGATTTTTGAAGTAGAACCCTTTTTTTTTTTTTTTTTATTTATTTTGTTTCTGTTTCAGCTTGAATCTGGATTTTTTATGATTATCATTTATCTCTGGTTTTGAATTGTATCTTCTAGATAGAGATCTGTTGTGTTGATCTTTAATACATATTTATCTCTGTTCTTTAGAATTTTGATTTGAACTTTAAAGCAAATCCATATGCTTGTTGTGCAAAGTTTATTACATGGTTATTTGAAATACTGTTTCTATGTTGCTCTTTTCACTTTCTCAAAAAGTTAATCATCTTTAATTTAGGGGCATCATTTAAGCCAAAAAGGTTATTGGGATATATTCTTTGTCACCAATTATTTCTGTCATACTCATATCACCATATTACCTTTATGCTTTGTTGACCTTTTGTTTGTTGATTTTCTATTTTTTTTAAAACTTTCTGGGTCTAGATCTATCATCTAGGTGCCTCCTTTTAATCAATATTGGTTTGAGAAAAATTGAGTTTGGATTTTCCAATTGGACATGGAATTTTGGTTCTGGGAGTGCTGTTACTTTGCAAGAAATTTGTGAGTGTGTGTGTTAGTGTAGCTTCTTTGCTGAATACTAAACTGTTTGTGTATAAACAAGATTGGGGGCTTATGATATTTGGTCAATACATGCATGTGGTATTCATAGTCTAATAATCGCAACCTATTTCATGGCTTAGTTTGCTTGCAATTTTTTTTCAACTTTTTCAAAATTGACTTTTCAGTCTCTCGAGAACAGGATCTAACAACCTTCTTGACTTTTAGACATAATGCTTAAAAACCCCAAAACCAATTTTGTCTCCACCCTTAAGATAGACTGGATTACAGATTACTTAGAAGATCAAACAAAGCTTGTGGTTCTCGTCAACACTTGATCTTTGACTCACTCCACGAGCAAGATTGATCAAGTTGAGCATGAACGATTTTGAATGTGCAACCTAAACTTTATAGAATTGCAAAGGAACTTAGTTGTAAGTTAAATAAAAGCTCAAAAGCTCTTTTGCTACATTTTTCTCCAGGGAGTTTGTCGTGATTCCATTCTCGACGCATGCTTCAAACCTCTCCTCATTCACCTCAACAACCCCACACTGGAATCTTCCTTTGAGTGAGGCACCATTATAGGGTCTTGAAATTTGAATTCTGTAGGAAGGCAATGACTTTTGTGATATTGTTAATGATCGTTTCTTTTTGTTTTCAGCTTTAATATGAGTGACATACCTTTGATAGAAATTTCTATGAATGGATTCATAACTTGAGGGAAAATGTTCTTGTTCAGTGTACACAGCTGCTTGAAAATCATTCCTTCTGTTCATTGATATTCTTGCATTTGGGATGACTGGGATTCCAGCGGTTCTAGACTTGAGCTTTTGATTCGTGGATTTCAGCGGAGGGTTAATAAGTTAATAGTGTGCATATGCATATTCTTGTTTGATTGTTGTTGATGAATATCACACTCCATGAGTACCAAGTCGTTTTCTTATTTTTACGTTATTCCCTCCATTTCTAGTTACAAAATTGGACATCTCATTTTTGTTTAAGTTATTTTTCTAGCTCATGGATCATGTTCTTCATATTGAATGTTGATCAGTTTCTAATTTTTGTTCTAACGTGCAGTCGGGTTGCTGTAAACCTTCCAATGACTGCAATTTCAGTTATGTGAGCCCAATTGTCTGGAACAAGACTGCTACAAACTCGCCCAACCCAGACTGTAATTTGTGGGAAAATGATCCCAATGTTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGGTTGCTTGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTTCTCGTATTTCTCATTATCGTCTACTCGGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACCATGCCTATCAACGGCAATGGAAGTGATCTCAAGCTGAACCGATAGTTCTGTAAGCATTCTCGTTGTTTAGTTTGCCTTTTTCTTGAATTCCCCTCTATGTATATTGTTTTTCTCCTCCCTTTTCGGAGGTCGTGATTTTGTTTGTTTGACTTTGATCTGCTGTTTTCTTTGGAGATATGATGATTTGTAGTGCTGACATTGATTGTCTCTCTCTGTTCTTCCATTTTGTGAATGTTGGTTAGTTTCTGGTTAGTGTAACATGTATTTTTGGCATGAGATTTTGCTGTTATTTCATCTCTCTTTTTAGCCCTTTGTAATGTCTTGGAGATATGCAACCCAACAAAGTTTCATGCTAGGAATCCAAATAGAAACCTTTAATCCAAAAGAACAAAAACAAACTAAAA CTCTAATTCATTCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAAACAGTCTGAAAAATTTCTCCCCTCATTTTACTTCACCACTCCAAATTCTTCACAATGCCTCGAATCAGCAACAACCTCGTCGGAATCCTCAACTTCGTCACCTTCTTACTCTCGATCCCAATTCTCTGGGCCGGCGTTTGGCTCAGCAAACAAGGAAGCACCGAATGTGAGAAGTATTTAGACAAACCCATTATCATAATCGGCGTTTTTCTCTTGTTGGTTTCTCTCGCTGGTCTTCTCGGTGCTTGCTGTAGAATCTCATGGCTTTTATGGGTGTACCTTCTTGTATGTTTGTTCTTATTGTTATTCTCTTTGCTTTCACCATTTTCGCTTTTGTCGTCACTAACAAAGGCGCCGGTGAGGTCTTGTCTAATCGGGGTTATAAGGAGTATAGGCTTGGAGATTACTCTGGTTGGTTGCAAAAGAGAGTGAACAATAATAAAAATTGGAATAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCTACCTTTGCTGATAAGTATATTAAGGATACTGTTGAACAGTTTTATCAGGAGAATTTGTCTGCTCTTCAGTCGGGTTGCTGTAAACCTTCCAATGACTGCAATTTCAGTTATGTGAGCCCAATTGTCTGGAACAAGACTGCTACAAACTCGCCCAACCCAGACTGTAATTTGTGGGAAAATGATCCCAATGTTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGGTTGCTTGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTTCTCGTATTTCTCATTATCGTCTACTCGGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACCATGCCTATCAACGGCAATGGAAGTGATCTCAAGCTGAACCGATAGTTCTGTAAGCATTCTCGTTGTTTAGTTTGCCTTTTTCTTGAATTCCCCTCTATGTATATTGTTTTTCTCCTCCCTTTTCGGAGGTCGTGATTTTGTTTGTTTGACTTTGATCTGCTGTTTTCTTTGGAGATATGATGATTTGTAGTGCTGACATTGATTGTCTCTCTCTGTTCTTCCATTTTGTGAATGTTGGTTAGTTTCTGGTTAGTGTAACATGTATTTTTGGCATGAGATTTTGCTGTTATTTCATCTCTCTTTTTAGCCCTTTGTAATGTCTTGGAGATATGCAACCCAACAAAGTTTCATGCTAGGAATCCAAATAGAAACCTTTAATCCAAAAGAACAAAAACAAACTAAAA ATGGCTTTTATGGGTGTACCTTCTTGTATGTTTGTTCTTATTGTTATTCTCTTTGCTTTCACCATTTTCGCTTTTGTCGTCACTAACAAAGGCGCCGGTGAGGTCTTGTCTAATCGGGGTTATAAGGAGTATAGGCTTGGAGATTACTCTGGTTGGTTGCAAAAGAGAGTGAACAATAATAAAAATTGGAATAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCTACCTTTGCTGATAAGTATATTAAGGATACTGTTGAACAGTTTTATCAGGAGAATTTGTCTGCTCTTCAGTCGGGTTGCTGTAAACCTTCCAATGACTGCAATTTCAGTTATGTGAGCCCAATTGTCTGGAACAAGACTGCTACAAACTCGCCCAACCCAGACTGTAATTTGTGGGAAAATGATCCCAATGTTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGGTTGCTTGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTTCTCGTATTTCTCATTATCGTCTACTCGGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACCATGCCTATCAACGGCAATGGAAGTGA MAFMGVPSCMFVLIVILFAFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSGWLQKRVNNNKNWNKIKSCLIDGKICSTFADKYIKDTVEQFYQENLSALQSGCCKPSNDCNFSYVSPIVWNKTATNSPNPDCNLWENDPNVLCFNCQACKAGLLDNIKSNWKKVAVVNIVFLVFLIIVYSVGCCAFRNNREDHAYQRQWK Homology
BLAST of PI0024324 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.0e-73 Identity = 124/182 (68.13%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.0e-73 Identity = 123/191 (64.40%), Postives = 152/191 (79.58%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 8.7e-65 Identity = 107/183 (58.47%), Postives = 141/183 (77.05%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy Swiss-Prot
Match: Q9LPR6 (Tetraspanin-11 OS=Arabidopsis thaliana OX=3702 GN=TET11 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.1e-46 Identity = 93/186 (50.00%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.9e-46 Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy TrEMBL
Match: A0A5D3B942 (Tetraspanin-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00070 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108 Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy TrEMBL
Match: A0A1S3BTP8 (tetraspanin-8 OS=Cucumis melo OX=3656 GN=LOC103493428 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108 Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy TrEMBL
Match: A0A0A0LJ53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G037260 PE=3 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108 Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy TrEMBL
Match: A0A6J1DIW9 (tetraspanin-8-like OS=Momordica charantia OX=3673 GN=LOC111020891 PE=3 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.1e-101 Identity = 176/191 (92.15%), Postives = 183/191 (95.81%), Query Frame = 0
BLAST of PI0024324 vs. ExPASy TrEMBL
Match: A0A6J1K7I5 (tetraspanin-8-like OS=Cucurbita maxima OX=3661 GN=LOC111492367 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100 Identity = 173/191 (90.58%), Postives = 184/191 (96.34%), Query Frame = 0
BLAST of PI0024324 vs. NCBI nr
Match: XP_008452368.1 (PREDICTED: tetraspanin-8 [Cucumis melo] >KAA0043105.1 tetraspanin-8 [Cucumis melo var. makuwa] >TYJ96382.1 tetraspanin-8 [Cucumis melo var. makuwa]) HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108 Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of PI0024324 vs. NCBI nr
Match: XP_004144706.1 (tetraspanin-8 [Cucumis sativus] >KGN61079.1 hypothetical protein Csa_021133 [Cucumis sativus]) HSP 1 Score: 401.4 bits (1030), Expect = 4.7e-108 Identity = 188/191 (98.43%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of PI0024324 vs. NCBI nr
Match: XP_038889434.1 (tetraspanin-8 [Benincasa hispida]) HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106 Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0
BLAST of PI0024324 vs. NCBI nr
Match: XP_022153384.1 (tetraspanin-8-like [Momordica charantia]) HSP 1 Score: 378.3 bits (970), Expect = 4.2e-101 Identity = 176/191 (92.15%), Postives = 183/191 (95.81%), Query Frame = 0
BLAST of PI0024324 vs. NCBI nr
Match: XP_022997456.1 (tetraspanin-8-like [Cucurbita maxima]) HSP 1 Score: 374.4 bits (960), Expect = 6.1e-100 Identity = 173/191 (90.58%), Postives = 184/191 (96.34%), Query Frame = 0
BLAST of PI0024324 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 ) HSP 1 Score: 277.7 bits (709), Expect = 7.3e-75 Identity = 123/191 (64.40%), Postives = 152/191 (79.58%), Query Frame = 0
BLAST of PI0024324 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 ) HSP 1 Score: 277.7 bits (709), Expect = 7.3e-75 Identity = 124/182 (68.13%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of PI0024324 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 ) HSP 1 Score: 248.1 bits (632), Expect = 6.2e-66 Identity = 107/183 (58.47%), Postives = 141/183 (77.05%), Query Frame = 0
BLAST of PI0024324 vs. TAIR 10
Match: AT1G18520.1 (tetraspanin11 ) HSP 1 Score: 186.4 bits (472), Expect = 2.2e-47 Identity = 93/186 (50.00%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of PI0024324 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 ) HSP 1 Score: 185.3 bits (469), Expect = 4.9e-47 Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|