PI0024265 (gene) Melon (PI 482460) v1

Overview


Name	PI0024265
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag/pol protein
Location	chr07: 5934501 .. 5937467 (-)
RNA-Seq Expression	PI0024265
Synteny	PI0024265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGTTGGCAAAGCGAGCACAAGATTCGAAGGGTTGCATTTAATGTAACCCCCGAATCCTGATTACGAAGCGACGTGCAGATTCTGTCAGGGCTCATTAATTACTGTGATGATGAGCCCCGCAGACATTTTCGCTTATAAATAACCACCTAACCCTCTGAAATCAAATTTATTTGCGCGACCTAGCCTTAGAACTTTTTAAAACTCTCTTGTCTTCATCGCGAAACTCACCGAAAAACTCATCCCTCGTCCCAAACTTCATCAGAAACCTCATACCTTACCCAAAAATGGCCGGACAAGCAAACACCAAGATCAGATCAGAGTGCGTTCTGCTGGCCCTGAATCAGAACGCCCCACATTGCGAGGAAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCATGGCAAAGGCAAGGTGTTACTTAAGCCTCCACCTGAAGCATCTAACCTTTTCATGGAAGTAGAGGTTGATAATTTGGACCAAGAGGCAGTGCTTGATTTTCTCAACGAGCAGATGAAAAAGCGAAAAGACGCACATCTCAAGAGGACAAAGGAAGCTCGTCGTAGGAAGGACGAGCGCAAGCGAATGAGATTTGAGGAACGTCAAAAGGTGAGGAGCACATTAGAAATACGCTCACCGCCTAATGAAGTTGCGGAGCTTCATAAGAAAATATCTGACAAGCTCGCTCAAGTCTCGTTCGCCAAAACGAGGAAAACAATAGAGGCAGTTAAGACTGCCCTAAAAAGGAAGGAAGAAAAGAAAAAGACGCTTGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCCGCGAAGATGAAAGCACTGGAGCCTGAGAGGAACCTCGAAGTTGTTGCTGAAGAACTCGAGGACGAGCTGTTGGCGATGAGCCCACTTGATGAAGGGCCACCGCCAAGAAAATCAAGGGAGGTCGTCGGACCATCTAAGGGAAAGAAGAAGATTGGGCGTTCTGGACCTGAAGAGCGCCCATCAGGCGGCGAAACCATTACCAAAACGCCCCCAATCAACTCCCTCATCAAGGTTGAGAAAGGGTTGTTTCCGTTCAATGGTCAACTCTCAGACTTCCTCTACGCGCCCATCCAGGCGTTTGGGTGGAAGCAGTTTTTCAAAGGGCACACCAAGTTAAGATTGGGGGTAGTGGAGAAGTTTTATGCGACTAAACTCAATGCGGACGAGTTTAGCATGGAGATCAGTGGCAAAATAGTGAGCTTCAACGCGGAGGCCATCAACGCGTTATATGATCTGCCCAATGATGCTGAAACACCTGGGCAAATATACGTGGTTAACCCCACAAGAAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACGGGAAAGTATCAACTCTATCCACACCAACTAACCATAGAGGCGAGCGTGTGGCTGTTTTTCATCAAAAAGAAGATCTTCCCAATGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTGCTCTATTGTATAATGACGAAGAAGCGCGTTAACCTTGACGATCTAATAGCCACATCCATTCTGTCTTGGATGCGGACTCCTAAAGGCGCCATGCCCTTCCCATCCACCGTTGAAGCCCTCTGCCTTAAGGCTGTGCCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAATCGCATGATCACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGCAAGAGGAAGTCCCCAGCCGCTGCATCAACCCCCCCACCAAAAGTAAAAAAACCAAGGGTTGATGTGGCGAAGCAGCCATCACCACTGAAGATCATTCATCCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACAAGTCCAAAACAAATCCAGTAGCTCTCAGCCTCCTCGCCATTCTTCGCTCATTCCATCCACACCACCTTCACCCATAATCTCTCCCCGCCATTCACCTCTCCCCCATATTCTTTCCCCTATCAACGTTCCTAACCTCTCCCCACGATCGCCTACCCCTCCGCCCACAAAATCCAATTCCCCACTACTTCCTACAAATGAACCCTCTCCTCGACGAACAACGCCCCTTTCGCCTCTCATCCTTTCGCCCATCATGGATCTTGCCCCACTTTGCAATGACCAGCCCACGGCCGCCACTGAGGTCGTTAAGGTTTCCCCCCCCCCCCCACCATTCATCAGGTAGACCCTTCTACGCGAGTCTCTCCCATTTTCATTGTTTCCAAAGAGGACGCCCCACCAGCCATCCGGGTCTCACCGCCACCACCACCGCCTGCTGTGGATACAGCGTAAAATGTTGATGACCCATACGTTAAGGACAAAACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACTCCCACCGCCCAACCTCCCACCGCGCCTAGAGAAGATGACGATTTGGGCGAACTGTTAGGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGACGACGCAACTCCAATCTTTGCAAACTACAGTCAATCAGTTGCAACGCCTCAACGCCGAAAACCTTGTGACGCCCGCTTCTCAAAAAGACATCAGTGCCTTGCGAAGCGAACTGAAGGAACTTTCAGCAAACAACGTCCAACTCTCTACCATCGTATCCAACCTCTTCACTTTCGTCTCCAGCCTCCCCTCTCTGGTCATCGCCCAATCTGAGATGATGCGGTAAATAGCTGCGCGACATGATAGGCAGTTCCGCACGCAAATGGAATACACGTACGCAGCAATTGTTCAACGCGTGCCTGCACCAATCATTCCGCCAGATCTTGAAGCACCCTTTCCACCACTCACGCGTCTTGGCGACCCTGCTCCCCGTCAAGATAACTAA

mRNA sequence

ATGAAACCTCATACCTTACCCAAAAATGGCCGGACAAGCAAACACCAAGATCAGATCAGAGTGCGTTCTGCTGGCCCTGAATCAGAACGCCCCACATTGCGAGGAAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCATGGCAAAGGCAAGGTGTTACTTAAGCCTCCACCTGAAGCATCTAACCTTTTCATGGAAGTAGAGGTTGATAATTTGGACCAAGAGGCAGTGCTTGATTTTCTCAACGAGCAGATGAAAAAGCGAAAAGACGCACATCTCAAGAGGACAAAGGAAGCTCGTCGTAGGAAGGACGAGCGCAAGCGAATGAGATTTGAGGAACGTCAAAAGGTGAGGAGCACATTAGAAATACGCTCACCGCCTAATGAAGTTGCGGAGCTTCATAAGAAAATATCTGACAAGCTCGCTCAAGTCTCGTTCGCCAAAACGAGGAAAACAATAGAGGCAGTTAAGACTGCCCTAAAAAGGAAGGAAGAAAAGAAAAAGACGCTTGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCCGCGAAGATGAAAGCACTGGAGCCTGAGAGGAACCTCGAAGTTGTTGCTGAAGAACTCGAGGACGAGCTGTTGGCGATGAGCCCACTTGATGAAGGGCCACCGCCAAGAAAATCAAGGGAGGTCGTCGGACCATCTAAGGGAAAGAAGAAGATTGGGCGTTCTGGACCTGAAGAGCGCCCATCAGGCGGCGAAACCATTACCAAAACGCCCCCAATCAACTCCCTCATCAAGGTTGAGAAAGGGTTGTTTCCGTTCAATGGTCAACTCTCAGACTTCCTCTACGCGCCCATCCAGGCGTTTGGGTGGAAGCAGTTTTTCAAAGGGCACACCAAGTTAAGATTGGGGGTAGTGGAGAAGTTTTATGCGACTAAACTCAATGCGGACGAGTTTAGCATGGAGATCAGTGGCAAAATAGTGAGCTTCAACGCGGAGGCCATCAACGCGTTATATGATCTGCCCAATGATGCTGAAACACCTGGGCAAATATACGTGGTTAACCCCACAAGAAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACGGGAAAGTATCAACTCTATCCACACCAACTAACCATAGAGGCGAGCGTGTGGCTGTTTTTCATCAAAAAGAAGATCTTCCCAATGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTGCTCTATTGTATAATGACGAAGAAGCGCGTTAACCTTGACGATCTAATAGCCACATCCATTCTGTCTTGGATGCGGACTCCTAAAGGCGCCATGCCCTTCCCATCCACCGTTGAAGCCCTCTGCCTTAAGGCTGTGCCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAATCGCATGATCACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGCAAGAGGAAGTCCCCAGCCGCTGCATCAACCCCCCCACCAAAAGTAAAAAAACCAAGGGTTGATGTGGCGAAGCAGCCATCACCACTGAAGATCATTCATCCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACAAGTCCAAAACAAATCCAGTAGCTCTCAGCCTCCTCGCCATTCTTCGCTCATTCCATCCACACCACCTTCACCCATAATCTCTCCCCGCCATTCACCTCTCCCCCATATTCTTTCCCCTATCAACGTTCCTAACCTCTCCCCACGATCGCCTACCCCTCCGCCCACAAAATCCAATTCCCCACTACTTCCTACAAATGAACCCTCTCCTCGACGAACAACGCCCCTTTCGCCTCTCATCCTTTCGCCCATCATGGATCTTGCCCCACTTTGCAATGACCAGCCCACGGCCGCCACTGAGGTCGTTAAGGACAAAACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACTCCCACCGCCCAACCTCCCACCGCGCCTAGAGAAGATGACGATTTGGGCGAACTGTTAGGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGACGACGCAACTCCAATCTTTGCAAACTACAGTCAATCAGTTGCAACGCCTCAACGCCGAAAACCTTGTGACGCCCGCTTCTCAAAAAGACATCAGTGCCTTGCGAAGCGAACTGAAGGAACTTTCAGCAAACAACGTCCAACTCTCTACCATCGTATCCAACCTCTTCACTTTCGTCTCCAGCCTCCCCTCTCTGGTCATCGCCCAATCTGAGATGATGCGGCAGTTCCGCACGCAAATGGAATACACGTACGCAGCAATTGTTCAACGCGTGCCTGCACCAATCATTCCGCCAGATCTTGAAGCACCCTTTCCACCACTCACGCGTCTTGGCGACCCTGCTCCCCGTCAAGATAACTAA

Coding sequence (CDS)

ATGAAACCTCATACCTTACCCAAAAATGGCCGGACAAGCAAACACCAAGATCAGATCAGAGTGCGTTCTGCTGGCCCTGAATCAGAACGCCCCACATTGCGAGGAAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCATGGCAAAGGCAAGGTGTTACTTAAGCCTCCACCTGAAGCATCTAACCTTTTCATGGAAGTAGAGGTTGATAATTTGGACCAAGAGGCAGTGCTTGATTTTCTCAACGAGCAGATGAAAAAGCGAAAAGACGCACATCTCAAGAGGACAAAGGAAGCTCGTCGTAGGAAGGACGAGCGCAAGCGAATGAGATTTGAGGAACGTCAAAAGGTGAGGAGCACATTAGAAATACGCTCACCGCCTAATGAAGTTGCGGAGCTTCATAAGAAAATATCTGACAAGCTCGCTCAAGTCTCGTTCGCCAAAACGAGGAAAACAATAGAGGCAGTTAAGACTGCCCTAAAAAGGAAGGAAGAAAAGAAAAAGACGCTTGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCCGCGAAGATGAAAGCACTGGAGCCTGAGAGGAACCTCGAAGTTGTTGCTGAAGAACTCGAGGACGAGCTGTTGGCGATGAGCCCACTTGATGAAGGGCCACCGCCAAGAAAATCAAGGGAGGTCGTCGGACCATCTAAGGGAAAGAAGAAGATTGGGCGTTCTGGACCTGAAGAGCGCCCATCAGGCGGCGAAACCATTACCAAAACGCCCCCAATCAACTCCCTCATCAAGGTTGAGAAAGGGTTGTTTCCGTTCAATGGTCAACTCTCAGACTTCCTCTACGCGCCCATCCAGGCGTTTGGGTGGAAGCAGTTTTTCAAAGGGCACACCAAGTTAAGATTGGGGGTAGTGGAGAAGTTTTATGCGACTAAACTCAATGCGGACGAGTTTAGCATGGAGATCAGTGGCAAAATAGTGAGCTTCAACGCGGAGGCCATCAACGCGTTATATGATCTGCCCAATGATGCTGAAACACCTGGGCAAATATACGTGGTTAACCCCACAAGAAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACGGGAAAGTATCAACTCTATCCACACCAACTAACCATAGAGGCGAGCGTGTGGCTGTTTTTCATCAAAAAGAAGATCTTCCCAATGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTGCTCTATTGTATAATGACGAAGAAGCGCGTTAACCTTGACGATCTAATAGCCACATCCATTCTGTCTTGGATGCGGACTCCTAAAGGCGCCATGCCCTTCCCATCCACCGTTGAAGCCCTCTGCCTTAAGGCTGTGCCATTCCTCTGCGCCATCAATGCAATTCCAATCCCAGGCGGGCTGTGCAACCAAATGGCTTTGAATCGCATGATCACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGCAAGAGGAAGTCCCCAGCCGCTGCATCAACCCCCCCACCAAAAGTAAAAAAACCAAGGGTTGATGTGGCGAAGCAGCCATCACCACTGAAGATCATTCATCCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACAAGTCCAAAACAAATCCAGTAGCTCTCAGCCTCCTCGCCATTCTTCGCTCATTCCATCCACACCACCTTCACCCATAATCTCTCCCCGCCATTCACCTCTCCCCCATATTCTTTCCCCTATCAACGTTCCTAACCTCTCCCCACGATCGCCTACCCCTCCGCCCACAAAATCCAATTCCCCACTACTTCCTACAAATGAACCCTCTCCTCGACGAACAACGCCCCTTTCGCCTCTCATCCTTTCGCCCATCATGGATCTTGCCCCACTTTGCAATGACCAGCCCACGGCCGCCACTGAGGTCGTTAAGGACAAAACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACTCCCACCGCCCAACCTCCCACCGCGCCTAGAGAAGATGACGATTTGGGCGAACTGTTAGGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGTGGACCAGACGACGCAACTCCAATCTTTGCAAACTACAGTCAATCAGTTGCAACGCCTCAACGCCGAAAACCTTGTGACGCCCGCTTCTCAAAAAGACATCAGTGCCTTGCGAAGCGAACTGAAGGAACTTTCAGCAAACAACGTCCAACTCTCTACCATCGTATCCAACCTCTTCACTTTCGTCTCCAGCCTCCCCTCTCTGGTCATCGCCCAATCTGAGATGATGCGGCAGTTCCGCACGCAAATGGAATACACGTACGCAGCAATTGTTCAACGCGTGCCTGCACCAATCATTCCGCCAGATCTTGAAGCACCCTTTCCACCACTCACGCGTCTTGGCGACCCTGCTCCCCGTCAAGATAACTAA

Protein sequence

MKPHTLPKNGRTSKHQDQIRVRSAGPESERPTLRGSGEQRTPQYTHLKHGKGKVLLKPPPEASNLFMEVEVDNLDQEAVLDFLNEQMKKRKDAHLKRTKEARRRKDERKRMRFEERQKVRSTLEIRSPPNEVAELHKKISDKLAQVSFAKTRKTIEAVKTALKRKEEKKKTLADLSEQVAELPAKMKALEPERNLEVVAEELEDELLAMSPLDEGPPPRKSREVVGPSKGKKKIGRSGPEERPSGGETITKTPPINSLIKVEKGLFPFNGQLSDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYATKLNADEFSMEISGKIVSFNAEAINALYDLPNDAETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWMRTPKGAMPFPSTVEALCLKAVPFLCAINAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTPEGMAQAERKRKSPAAASTPPPKVKKPRVDVAKQPSPLKIIHPSSRPIKRAPPQVQNKSSSSQPPRHSSLIPSTPPSPIISPRHSPLPHILSPINVPNLSPRSPTPPPTKSNSPLLPTNEPSPRRTTPLSPLILSPIMDLAPLCNDQPTAATEVVKDKTPILNEVGETASSAHTPTAQPPTAPREDDDLGELLGSLVCKPVFDYFDQVLAHQVDQTTQLQSLQTTVNQLQRLNAENLVTPASQKDISALRSELKELSANNVQLSTIVSNLFTFVSSLPSLVIAQSEMMRQFRTQMEYTYAAIVQRVPAPIIPPDLEAPFPPLTRLGDPAPRQDN

Homology

[Close]

BLAST of PI0024265 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-41
Identity = 90/171 (52.63%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 294 KLRLGVVEKFYATKLNADEFSMEISGKIVSFNAEAINALYDLPNDAETPGQIYVVNPTRR 353
           K+R+ VV KFY  K N  +  + I  +   FN E IN LY+ PNDAE  GQ  V   T+ 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 354 MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTIEASVWLFFIKKKIFPMRHDSTINLES 413
           +A+EAL+V+AWPG   EV P   +YQLYPH LT +A+VW+FF K KIFP  +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 414 AMLLYCIMTKKRVNLDDLIATSILSWMRTPKGAMPFPSTVEALCLKAVPFL 464
            ++LYCIM KK +NLD++I  +IL+WM  PK AMPFPS +E LCLK +P L
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSL 171

[Close]

BLAST of PI0024265 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39
Identity = 108/294 (36.73%), Postives = 160/294 (54.42%), Query Frame = 0


Query: 156 EAVKTALKRKEEKKKTLADL--SEQVAELPAKMKALEPERNLEVVAEELEDELLAMSPLD 215
           +  + A ++ E+ KK L  +    Q  +  A+ K    E+  +  ++E E EL  +SPL+
Sbjct: 16  KVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELSPLE 75

Query: 216 E---GPPPRKSREVVGPS----KGKKKIGRSGPEERPSGGETITKTPPINSLIKVEKGLF 275
           +      P+K R + G      + K K  +   E + S  E +     +     +EKG+F
Sbjct: 76  DRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEKGIF 135

Query: 276 PFNGQLSDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYATKLNADEFSMEISGKIVSFNA 335
           PF GQL  FL +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK+V+F  
Sbjct: 136 PFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVNFGP 195

Query: 336 EAINALYDL-PNDAETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLT 395
           + +N LY L     E P       P+    + ALE +AWPG  W++TP  KYQL+PH L 
Sbjct: 196 KVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLK 255

Query: 396 IEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWM 440
             ASVWL FIKK + P RHD+TI+LE  MLLYCIM +  +N+D++I   I +W+
Sbjct: 256 TTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0024265 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-34
Identity = 101/281 (35.94%), Postives = 146/281 (51.96%), Query Frame = 0


Query: 203 EDELLAMSPLD---EGPPPRKSREVVGPSKGKKKI--GRSGPEERPSGGETITKTPPINS 262
           E++   +SPL+   E   PRK ++ +      +++   ++  EE     E    +     
Sbjct: 36  EEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSAEERK 95

Query: 263 LIKVEKGLFPFNGQLSDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYATKLNADEFSMEI 322
              VEKG F F  QL  FL  PI+A GW++F +G   +R GVV+ FY             
Sbjct: 96  HFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFY------------- 155

Query: 323 SGKIVSFNAEAINALYDLPNDAETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKY 382
           +GKI +    AI      P+D +               +EALE +AW    W+VT   KY
Sbjct: 156 NGKIDTEKHYAIVKERREPSDCD--------------MQEALERVAWARKKWDVTSIKKY 215

Query: 383 QLYPHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILS 442
           +L+ H LT EASVWL FIKKK+ P RHD+TI+ E  MLLYCIM +  V++D++I   I +
Sbjct: 216 RLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKA 275

Query: 443 WMRTPKGAMPFPSTVEALCLKAVPFLCAINAIP-IPGGLCN 478
           W++ P+GA PFP  +E LCL++   L     I  +  G+CN
Sbjct: 276 WVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0024265 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-34
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 322  VSFNAEAINALYDLPND-AETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLY 381
            V F  E IN LYDLPND    PGQ  +V+     A++ +++I WP A    TPT + QL+
Sbjct: 1232 VPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLF 1291

Query: 382  PHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWMR 441
            PHQLTIEA+VWLFFIKKKIFP  HDSTI  E A++LYCI  KK  NL  ++  + LSWMR
Sbjct: 1292 PHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAFLSWMR 1351

Query: 442  TPKGAMPFPSTVEALCLKAV-PFLCAINAIPIPGGLCN 478
             PK A PFP+TV+ LCLK +      I  I + GG CN
Sbjct: 1352 NPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0024265 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-34
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 322 VSFNAEAINALYDLPND-AETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLY 381
           V F  E IN LYDLPND    PGQ  +V+     A++ +++I WP A    TPT + QL+
Sbjct: 71  VPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLF 130

Query: 382 PHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWMR 441
           PHQLTIEA+VWLFFIKKKIFP  HDSTI  E A++LYCI  KK  NL  ++  + LSWMR
Sbjct: 131 PHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAFLSWMR 190

Query: 442 TPKGAMPFPSTVEALCLKAV-PFLCAINAIPIPGGLCN 478
            PK A PFP+TV+ LCLK +      I  I + GG CN
Sbjct: 191 NPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

[Close]

BLAST of PI0024265 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 3.2e-41
Identity = 90/171 (52.63%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 294 KLRLGVVEKFYATKLNADEFSMEISGKIVSFNAEAINALYDLPNDAETPGQIYVVNPTRR 353
           K+R+ VV KFY  K N  +  + I  +   FN E IN LY+ PNDAE  GQ  V   T+ 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 354 MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTIEASVWLFFIKKKIFPMRHDSTINLES 413
           +A+EAL+V+AWPG   EV P   +YQLYPH LT +A+VW+FF K KIFP  +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 414 AMLLYCIMTKKRVNLDDLIATSILSWMRTPKGAMPFPSTVEALCLKAVPFL 464
            ++LYCIM KK +NLD++I  +IL+WM  PK AMPFPS +E LCLK +P L
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSL 171

[Close]

BLAST of PI0024265 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.9 bits (442), Expect = 3.0e-39
Identity = 108/294 (36.73%), Postives = 160/294 (54.42%), Query Frame = 0


Query: 156 EAVKTALKRKEEKKKTLADL--SEQVAELPAKMKALEPERNLEVVAEELEDELLAMSPLD 215
           +  + A ++ E+ KK L  +    Q  +  A+ K    E+  +  ++E E EL  +SPL+
Sbjct: 16  KVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELSPLE 75

Query: 216 E---GPPPRKSREVVGPS----KGKKKIGRSGPEERPSGGETITKTPPINSLIKVEKGLF 275
           +      P+K R + G      + K K  +   E + S  E +     +     +EKG+F
Sbjct: 76  DRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEKGIF 135

Query: 276 PFNGQLSDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYATKLNADEFSMEISGKIVSFNA 335
           PF GQL  FL +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK+V+F  
Sbjct: 136 PFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVNFGP 195

Query: 336 EAINALYDL-PNDAETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLT 395
           + +N LY L     E P       P+    + ALE +AWPG  W++TP  KYQL+PH L 
Sbjct: 196 KVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLK 255

Query: 396 IEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWM 440
             ASVWL FIKK + P RHD+TI+LE  MLLYCIM +  +N+D++I   I +W+
Sbjct: 256 TTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0024265 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 8.4e-34
Identity = 101/281 (35.94%), Postives = 146/281 (51.96%), Query Frame = 0


Query: 203 EDELLAMSPLD---EGPPPRKSREVVGPSKGKKKI--GRSGPEERPSGGETITKTPPINS 262
           E++   +SPL+   E   PRK ++ +      +++   ++  EE     E    +     
Sbjct: 36  EEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSAEERK 95

Query: 263 LIKVEKGLFPFNGQLSDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYATKLNADEFSMEI 322
              VEKG F F  QL  FL  PI+A GW++F +G   +R GVV+ FY             
Sbjct: 96  HFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFY------------- 155

Query: 323 SGKIVSFNAEAINALYDLPNDAETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKY 382
           +GKI +    AI      P+D +               +EALE +AW    W+VT   KY
Sbjct: 156 NGKIDTEKHYAIVKERREPSDCD--------------MQEALERVAWARKKWDVTSIKKY 215

Query: 383 QLYPHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILS 442
           +L+ H LT EASVWL FIKKK+ P RHD+TI+ E  MLLYCIM +  V++D++I   I +
Sbjct: 216 RLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKA 275

Query: 443 WMRTPKGAMPFPSTVEALCLKAVPFLCAINAIP-IPGGLCN 478
           W++ P+GA PFP  +E LCL++   L     I  +  G+CN
Sbjct: 276 WVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0024265 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-33
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 322  VSFNAEAINALYDLPND-AETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLY 381
            V F  E IN LYDLPND    PGQ  +V+     A++ +++I WP A    TPT + QL+
Sbjct: 1232 VPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLF 1291

Query: 382  PHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWMR 441
            PHQLTIEA+VWLFFIKKKIFP  HDSTI  E A++LYCI  KK  NL  ++  + LSWMR
Sbjct: 1292 PHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAFLSWMR 1351

Query: 442  TPKGAMPFPSTVEALCLKAV-PFLCAINAIPIPGGLCN 478
             PK A PFP+TV+ LCLK +      I  I + GG CN
Sbjct: 1352 NPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0024265 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-33
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 322 VSFNAEAINALYDLPND-AETPGQIYVVNPTRRMAREALEVIAWPGAAWEVTPTGKYQLY 381
           V F  E IN LYDLPND    PGQ  +V+     A++ +++I WP A    TPT + QL+
Sbjct: 71  VPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTRRLQLF 130

Query: 382 PHQLTIEASVWLFFIKKKIFPMRHDSTINLESAMLLYCIMTKKRVNLDDLIATSILSWMR 441
           PHQLTIEA+VWLFFIKKKIFP  HDSTI  E A++LYCI  KK  NL  ++  + LSWMR
Sbjct: 131 PHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAFLSWMR 190

Query: 442 TPKGAMPFPSTVEALCLKAV-PFLCAINAIPIPGGLCN 478
            PK A PFP+TV+ LCLK +      I  I + GG CN
Sbjct: 191 NPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

The following BLAST results are available for this feature:

BLAST of PI0024265 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6M5	1.5e-41	52.63	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]
A0A5A7TZE0	1.4e-39	36.73	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3DVQ6	4.1e-34	35.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	5.3e-34	53.16	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	5.3e-34	53.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0024265 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062900.1	3.2e-41	52.63	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048500.1	3.0e-39	36.73	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
KAA0054837.1	8.4e-34	35.94	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0049609.1	1.1e-33	53.16	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	1.1e-33	53.16	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]

BLAST of PI0024265 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	COILS	Coil	Coil	coord: 148..178
None	No IPR available	COILS	Coil	Coil	coord: 749..769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 618..632
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 602..617
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..571
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 668..690
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024265.1	PI0024265.1	mRNA