PI0024260 (gene) Melon (PI 482460) v1

Overview


Name	PI0024260
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA polymerase zeta processivity subunit
Location	chr11: 9175084 .. 9178982 (+)
RNA-Seq Expression	PI0024260
Synteny	PI0024260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGATCGTTTTTCTTTTAACATAAAAATTTGAAACAAACCGAAAACAATTCGGAACAAAACCTCAACACTGAAAATGCCGCAGTATTTTTGTAGATTATGAAGCGGGATGAATCGATCCCTTTGCTAACCCAAGTTTCCAGTTCTACACATCAGAGCAGAAGCTTAAAGGACTACGACCCATGTTTTGTAAGTTTCAACTCTTTGTATCCTTTCTTCCCCACCATAAAATTAATCAAGAAACGTCAGAAAGGAAAATAAATAATTAAATCTCCTTCCCTTCCATCTAATTTTGCGTTAAATTTCTCTTTCATTGATGATACTTGCTGGGATTTTGTTGGGTCATTCTTGTTTTTTGGATTTGTATTTGATTCCTTTGTCTGTTTCCTAAAATGGGGAACAAGGATTTAGCTTCCAGGACGTGTCTGGTTTAATCTAAATGGGCAATAAATCATGCAACGAACGAATTTAGAAGCATTGGTATTATGATAAACAGTTGAGCAAGTCTATGAATTATGTTCTCTTAATATTTGCTTGCATTTAGGATGATTGTCTGCGTGAGTTGAACTACAATAAACCTGTTGAGAGCTACAGAAAATGGAAAGATGTTGTGTATCTCTTATTAAAATCTTGAATGCTGATGCTTATATTTAGGGAAAGTCTAGAAATCAGAACTGAACTTTAGTAAGATAAAGTAATTAGAGAACTAGAACAGTTTAGTATTTGACTTAAGATCCAAAATGCAATATCATCTTTGATATTCATGCAACTTACTTGAAGACAACGATTGGCTTTGTTATGTAGAGAAGTCAAATGGAGTGTGCTTGAGAAATGAGATCGTTTATGCAATTGGCTTAGATGTTTATGTTGAGAATTTGAACGTCTAGCTTAAAGGCTATATCGCTTGCTTCTTATCTAGCCGATGGACTCGAGAGACAATAAAGTACCACCTCAAGGTTTTCCATTGTATCCTTATTTTTTCCAGCCCACAGTATCTTCAGTTTTTTGGTGATATGAGTAAAGTAGCTCTGCTATTGAACTAATTATTTGTGCAGGTGAGATTATTCAGATCCTAGGTGATTTCTTGGCGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTATTCTTTCTTTAATCTATTTGCCTAAGATCCTATTATCTGCTTTTTTTCTGGGAAATGATGGTGATTGCATGAAGTTTTTTCATTGTATTTCTACCAAATAATTAATAAACGATGCTTTTTAGTTTTTGGTCTTCACCCCCTCCCAACCGCAGGGAATAAGATATCAGTAGTCAATTTCAATGATCAATGAATTAAATAAAAGAAGGAAAAGATAGATAGGAATTGTGACTAATTATTGGTGGGGTTTATGTGAAGGTGCTTTTGAAAGAAGGAGGTACATGAATGCGGTTGTGCAGAAAGCTCGACATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTACCTTTCATCCAAAAGGTGACCATTCACTTGTATTCTTGTCCTCTATCTGCTAAAAGATGGTACTAAATTTCTTGTTTACCCATGTGCCATTTAGAATTGAAAGTTGAAACCAAGTCCTTTTGTCAAGGGCACTCTTGAACAGTGGACCATTTCTTTCACATGGCTACTTCTTGCTTGGTTTTAGTAAAAGTGAGTGTTGTTACTGATTGGATCCAGTGATGGAAACTATTGGGTTCTGTGGTTGTAAATATTAGATGCAAAAATTAAATTTTGGGGTGCTAGACTAGATGTTAAGGCTATAAGCTTTGAGTGGGTTGATTTCATACTAGTATTCTCATGGTACAAGACCATCTGTGTTTGCGCTTGCAACTCCATTCAATGAATCTTGAACCGTGAGAAGTCCATTGAAAACATAAACTAGGTTTCTATGCGACGCAATTATGATATGGCATATCCAACTTGATTGATCTCAGAGAAATAGTAGACCTTTTAGTGATTATAGAACTTATATAGTTAACTGCTTCTTCCTTGGGGCATATCCTGGTTGTTGGATTTCAGCCTTAATTGAGAGTTTGAGCTTAAAATTTATGAAGCCACAGCATATGATCAATCTCCTGTTTTTGTTATCCTGTTAGGCAGAGAGTTGTTTACTACAATATCTGCCACTGAAACATGCAACTATAAAACTTCATAAACCAAAAGAAAACTAAAGAAATAACAATAAATGTCAAATAATTCTGTATCCAATTTACTTAGTCTGAACAGGAGTTTCCTCTACAACTAGGGACTGGTGGAGAGAGTGGCGGTTATATTTTTCAACAATGATAACGTCCAACTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCAAAGGTTGAAAATTCCGACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTAATAATCTTACTAGCTGTTTCCATACTACAATCCTTAGAAATCTCCATTTGTTCCATTTTGGATAATTCTTTCAGACAAAATTGAAAGAACTTTTATAATTTTACCTTCTTATAACAGATTGCAAATGGGAAATAACTGCTTACTTCCAAAGACTCCCAAGTTCCAGTACAAGTAAGGATGCAGAATCATGGATCCCAACAGATACCAAACAATGGCAACAACCACCAGTGATCACCCCCATCAAGTCCATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAATCATTATGAATAAACAGGCATTACTGTGAAATTATTTTGCCTAGATTGTTCAAATGAAAAGTTTCTTGAACTTGTATGTTAGATCTTCTGAAGGCTATCCATAGTGTATACATAAACTCAATACAACAAAATTTATTCCTTTGAAAGCCTGAAGAGAGATGTCAAGTTTAATTTTGCAGCTAAAAAGATTCTTTCTTTTTCAGTCTCTGATACTATTGAGTGATATTGTATTGAAACCAAATCTTTATATCTTATGTAACATGAGGTGAAGTTTTTTGTCCAGGTCAGAGATGGGAATATGTATGGAAAATTTGAAGACATGTGTCAGAAGAAGCCAGAAGGGCATCATCATGTATGAATGGTTGATAAGGTTGGGTCCATTATTAACTCAGAAGTTGGAGATAGATCTGAAAGCAAAAAAAGGAAAAAGGAGTTTTTGTTTGGTAGGTTAATGAGAGACATCATAAGTTGGGGTTTGAGGGGTGGATCCCAGGTTGTGTCAGGCCTGCCACGGTTTCTGTCTTCATTCATGATGGCAATGACAGAACTTCCCCACTCTGTTTTTCTTAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTCTTACTTTTCAGACCATCAACTAGATGCTGATATATATTTATTATATATTATGTAAGTAAGGTCTTCTTTTTCTCTATGCTAATTGCTACCTACCCCCTTCAACCTTTTCACTGCTAAAATGGCATGGTAAATTCCTATCAGATCTCAGTTCTTTTTTACTTTCAAAAGTACTCTTTACAATTTGACTGATGCTTTTGCTCTTTTTTACAGGATAATGCACCAATTTCCTTCTCTGTCCCTTAATCCTTTGTAATTGTAAAATTTTGATTTTGGCTCTAAGGTAGCAAATCAGCCTCACCATTACAAATGATTGTCATACACAAGAAGACACTTTTTTTCAAGGCCATGAAAGTTTAAAGTTTTAATTGAGAAGTTATTGATTGAATTTTCCCTCTATGTGACATGCCACTGATAAGTTGGGAGGGATTGAGGCACTGAACTAGTTATTATAGTCATGTTTATTAGTGTATGAGTTAGTCTATGTTTG

mRNA sequence

GTTGATCGTTTTTCTTTTAACATAAAAATTTGAAACAAACCGAAAACAATTCGGAACAAAACCTCAACACTGAAAATGCCGCAGTATTTTTGTAGATTATGAAGCGGGATGAATCGATCCCTTTGCTAACCCAAGTTTCCAGTTCTACACATCAGAGCAGAAGCTTAAAGGACTACGACCCATGTTTTAGAAGTCAAATGGAGTGTGCTTGAGAAATGAGATCGTTTATGCAATTGGCTTAGATGTTTATGTTGAGAATTTGAACGTCTAGCTTAAAGGCTATATCGCTTGCTTCTTATCTAGCCGATGGACTCGAGAGACAATAAAGTACCACCTCAAGGTGAGATTATTCAGATCCTAGGTGATTTCTTGGCGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTTTTGAAAGAAGGAGGTACATGAATGCGGTTGTGCAGAAAGCTCGACATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTACCTTTCATCCAAAAGGGACTGGTGGAGAGAGTGGCGGTTATATTTTTCAACAATGATAACGTCCAACTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCAAAGGTTGAAAATTCCGACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTAATAATCTTACTAGCTGTTTCCATACTACAATCCTTAGAAATCTCCATTTGTTCCATTTTGGATAATTCTTTCAGACAAAATTGAAAGAACTTTTATAATTTTACCTTCTTATAACAGATTGCAAATGGGAAATAACTGCTTACTTCCAAAGACTCCCAAGTTCCAGTACAAGTAAGGATGCAGAATCATGGATCCCAACAGATACCAAACAATGGCAACAACCACCAGTGATCACCCCCATCAAGTCCATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAATCATTATGAATAAACAGGCATTACTGTGAAATTATTTTGCCTAGATTGTTCAAATGAAAAGTTTCTTGAACTTGTATGTTAGATCTTCTGAAGGCTATCCATAGTGTATACATAAACTCAATACAACAAAATTTATTCCTTTGAAAGCCTGAAGAGAGATGTCAAGTTTAATTTTGCAGCTAAAAAGATTCTTTCTTTTTCAGTCTCTGATACTATTGAGTGATATTGTATTGAAACCAAATCTTTATATCTTATGTAACATGAGGTGAAGTTTTTTGTCCAGGTCAGAGATGGGAATATGTATGGAAAATTTGAAGACATGTGTCAGAAGAAGCCAGAAGGGCATCATCATGTATGAATGGTTGATAAGGTTGGGTCCATTATTAACTCAGAAGTTGGAGATAGATCTGAAAGCAAAAAAAGGAAAAAGGAGTTTTTGTTTGGTAGGTTAATGAGAGACATCATAAGTTGGGGTTTGAGGGGTGGATCCCAGGTTGTGTCAGGCCTGCCACGGTTTCTGTCTTCATTCATGATGGCAATGACAGAACTTCCCCACTCTGTTTTTCTTAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTCTTACTTTTCAGACCATCAACTAGATGCTGATATATATTTATTATATATTATGTAAGTAAGGTCTTCTTTTTCTCTATGCTAATTGCTACCTACCCCCTTCAACCTTTTCACTGCTAAAATGGCATGGTAAATTCCTATCAGATCTCAGTTCTTTTTTACTTTCAAAAGTACTCTTTACAATTTGACTGATGCTTTTGCTCTTTTTTACAGGATAATGCACCAATTTCCTTCTCTGTCCCTTAATCCTTTGTAATTGTAAAATTTTGATTTTGGCTCTAAGGTAGCAAATCAGCCTCACCATTACAAATGATTGTCATACACAAGAAGACACTTTTTTTCAAGGCCATGAAAGTTTAAAGTTTTAATTGAGAAGTTATTGATTGAATTTTCCCTCTATGTGACATGCCACTGATAAGTTGGGAGGGATTGAGGCACTGAACTAGTTATTATAGTCATGTTTATTAGTGTATGAGTTAGTCTATGTTTG

Coding sequence (CDS)

ATGGACTCGAGAGACAATAAAGTACCACCTCAAGGTGAGATTATTCAGATCCTAGGTGATTTCTTGGCGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTTTTGAAAGAAGGAGGTACATGAATGCGGTTGTGCAGAAAGCTCGACATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTACCTTTCATCCAAAAGGGACTGGTGGAGAGAGTGGCGGTTATATTTTTCAACAATGATAACGTCCAACTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCAAAGGTTGAAAATTCCGACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTAA

Protein sequence

MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPGESLVH

Homology

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BLAST of PI0024260 vs. ExPASy Swiss-Prot
Match: Q94FL5 (DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-44
Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 12  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLL 71
           GE+ + L DF+ VAIT IV+LKG YPS AFERRRYMN VVQ+ARHPEL+DYIHS  SGLL
Sbjct: 10  GEVGRTLVDFMEVAITMIVYLKGFYPSAAFERRRYMNVVVQRARHPELRDYIHSAASGLL 69

Query: 72  PFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSE 131
           PFI+KGLVERVAV+FF+ DNV +ERF+FK+T+  S  + VE   LEFALR+FLIKLSVS+
Sbjct: 70  PFIEKGLVERVAVVFFSEDNVPVERFIFKITIKPSCAALVEEGQLEFALRSFLIKLSVSK 129

Query: 132 PLTKVLP 139
            L K LP
Sbjct: 130 SLVKPLP 136

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BLAST of PI0024260 vs. ExPASy Swiss-Prot
Match: Q4KWZ6 (Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MAD2L2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 47/129 (36.43%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 14  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPF 73
           +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P 
Sbjct: 15  VADVLSEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPL 74

Query: 74  IQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSE 133
           ++K  VE+V V+  + ++  +ERFVF++T     S  S+   S +E  LRAF++K+SV +
Sbjct: 75  LEKNDVEKVVVVILDKEHHPVERFVFEITQPPLLSISSESLLSHVEQLLRAFILKISVCD 134

Query: 134 PLTKVLPPG 141
            +    PPG
Sbjct: 135 AVLDNNPPG 143

[Close]

BLAST of PI0024260 vs. ExPASy Swiss-Prot
Match: Q568H3 (Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio OX=7955 GN=mad2l2 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-17
Identity = 48/129 (37.21%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 14  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPF 73
           +  IL +FL VAI  I++++ IYPSG F++R+  N  VQ + HP+L  YI  T+  + P 
Sbjct: 15  VADILCEFLEVAIHLILYVRDIYPSGIFQKRQKYNVPVQMSCHPQLNQYIQDTLHCVKPL 74

Query: 74  IQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSE 133
           I+K   E+V V+  N ++  +ERFVF+++     +  S+   S +E  LRA ++K+SV +
Sbjct: 75  IEKNEAEKVVVVIMNKEHHPVERFVFEISQPPLLAISSETLLSHVEQLLRAMILKISVCD 134

Query: 134 PLTKVLPPG 141
            +    PPG
Sbjct: 135 AVLDSNPPG 143

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BLAST of PI0024260 vs. ExPASy Swiss-Prot
Match: Q9D752 (Mitotic spindle assembly checkpoint protein MAD2B OS=Mus musculus OX=10090 GN=Mad2l2 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 6.4e-17
Identity = 46/129 (35.66%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 14  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPF 73
           +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P 
Sbjct: 15  VADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPL 74

Query: 74  IQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSE 133
           ++K  VE+V V+  + ++  +E+FVF++T     S  S    S +E  LRAF++K+SV +
Sbjct: 75  LEKNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSINSDSLLSHVEQLLRAFILKISVCD 134

Query: 134 PLTKVLPPG 141
            +    PPG
Sbjct: 135 AVLDHNPPG 143

[Close]

BLAST of PI0024260 vs. ExPASy Swiss-Prot
Match: D3Z8D9 (Mitotic spindle assembly checkpoint protein MAD2B OS=Rattus norvegicus OX=10116 GN=Mad2l2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.4e-17
Identity = 46/129 (35.66%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 14  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPF 73
           +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P 
Sbjct: 15  VADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPL 74

Query: 74  IQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSE 133
           ++K  VE+V V+  + ++  +E+FVF++T     S  S    S +E  LRAF++K+SV +
Sbjct: 75  LEKNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSINSDSLLSHVEQLLRAFILKISVCD 134

Query: 134 PLTKVLPPG 141
            +    PPG
Sbjct: 135 AVLDHNPPG 143

[Close]

BLAST of PI0024260 vs. ExPASy TrEMBL
Match: A0A1S3C494 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496306 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQ
Sbjct: 1   MDSRDIKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARNPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFKLTVNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNSDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           RAFLIKLSVSEPLTKVLPP
Sbjct: 121 RAFLIKLSVSEPLTKVLPP 139

[Close]

BLAST of PI0024260 vs. ExPASy TrEMBL
Match: A0A5D3DV44 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00560 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQ
Sbjct: 1   MDSRDIKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARNPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFKLTVNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNSDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           RAFLIKLSVSEPLTKVLPP
Sbjct: 121 RAFLIKLSVSEPLTKVLPP 139

[Close]

BLAST of PI0024260 vs. ExPASy TrEMBL
Match: A0A0A0KEI1 (HORMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139220 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRDNKVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ
Sbjct: 1   MDSRDNKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVFKLTVNQSYESKVENSDLEFA 120
           DYIHSTVSGLLPFIQKGLVERVAVIF N+D NVQLERFVFKLTVNQSYESKVENSDLEFA
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFSNSDSNVQLERFVFKLTVNQSYESKVENSDLEFA 120

Query: 121 LRAFLIKLSVSEPLTKVLPP 140
           LRAFLIKLSVSEPLTKVLPP
Sbjct: 121 LRAFLIKLSVSEPLTKVLPP 140

[Close]

BLAST of PI0024260 vs. ExPASy TrEMBL
Match: A0A6J1G790 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451503 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQ
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFKL VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           R+FLIKLSV+EPLTK LPP
Sbjct: 121 RSFLIKLSVTEPLTKTLPP 139

[Close]

BLAST of PI0024260 vs. ExPASy TrEMBL
Match: A0A6J1I0B4 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469702 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.4e-61
Identity = 122/138 (88.41%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQ
Sbjct: 1   MDSRDNKVTPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFKL VNQSY+SKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYKSKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLP 139
           R+FLIKLSV+EPLTK LP
Sbjct: 121 RSFLIKLSVTEPLTKTLP 138

[Close]

BLAST of PI0024260 vs. NCBI nr
Match: KAA0054619.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo var. makuwa] >TYK27581.1 DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQ
Sbjct: 1   MDSRDIKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARNPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFKLTVNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNSDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           RAFLIKLSVSEPLTKVLPP
Sbjct: 121 RAFLIKLSVSEPLTKVLPP 139

[Close]

BLAST of PI0024260 vs. NCBI nr
Match: XP_008456336.1 (PREDICTED: DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo] >XP_008456337.1 PREDICTED: DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQ
Sbjct: 1   MDSRDIKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARNPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFKLTVNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNSDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           RAFLIKLSVSEPLTKVLPP
Sbjct: 121 RAFLIKLSVSEPLTKVLPP 139

[Close]

BLAST of PI0024260 vs. NCBI nr
Match: XP_004145804.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucumis sativus] >KGN46822.1 hypothetical protein Csa_020870 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 3.2e-66
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRDNKVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ
Sbjct: 1   MDSRDNKVPPQGEIIQILGDFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVFKLTVNQSYESKVENSDLEFA 120
           DYIHSTVSGLLPFIQKGLVERVAVIF N+D NVQLERFVFKLTVNQSYESKVENSDLEFA
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFSNSDSNVQLERFVFKLTVNQSYESKVENSDLEFA 120

Query: 121 LRAFLIKLSVSEPLTKVLPP 140
           LRAFLIKLSVSEPLTKVLPP
Sbjct: 121 LRAFLIKLSVSEPLTKVLPP 140

[Close]

BLAST of PI0024260 vs. NCBI nr
Match: XP_038900295.1 (DNA polymerase zeta processivity subunit [Benincasa hispida] >XP_038900296.1 DNA polymerase zeta processivity subunit [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRD KVPPQGEI+QIL +FL VAITS+VFLKGIYPSGAFERRRYMNAVVQKARHPELQ
Sbjct: 1   MDSRDIKVPPQGEIVQILVEFLEVAITSVVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN DNVQ+ERFVFKLTVNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           RAFLIKLSVSEPLTKVLPP
Sbjct: 121 RAFLIKLSVSEPLTKVLPP 139

[Close]

BLAST of PI0024260 vs. NCBI nr
Match: XP_022947726.1 (DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >XP_022947728.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >KAG7034853.1 DNA polymerase zeta processivity subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 3.7e-62
Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60
           MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQ
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFKL VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKVENSDLEFAL 120

Query: 121 RAFLIKLSVSEPLTKVLPP 140
           R+FLIKLSV+EPLTK LPP
Sbjct: 121 RSFLIKLSVTEPLTKTLPP 139

[Close]

BLAST of PI0024260 vs. TAIR 10
Match: AT1G16590.1 (DNA-binding HORMA family protein )

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-45
Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 12  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLL 71
           GE+ + L DF+ VAIT IV+LKG YPS AFERRRYMN VVQ+ARHPEL+DYIHS  SGLL
Sbjct: 10  GEVGRTLVDFMEVAITMIVYLKGFYPSAAFERRRYMNVVVQRARHPELRDYIHSAASGLL 69

Query: 72  PFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSE 131
           PFI+KGLVERVAV+FF+ DNV +ERF+FK+T+  S  + VE   LEFALR+FLIKLSVS+
Sbjct: 70  PFIEKGLVERVAVVFFSEDNVPVERFIFKITIKPSCAALVEEGQLEFALRSFLIKLSVSK 129

Query: 132 PLTKVLP 139
            L K LP
Sbjct: 130 SLVKPLP 136

The following BLAST results are available for this feature:

BLAST of PI0024260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94FL5	8.0e-44	69.29	DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7...	[more]
Q4KWZ6	1.7e-17	36.43	Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MA...	[more]
Q568H3	3.7e-17	37.21	Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio OX=7955 GN=mad2...	[more]
Q9D752	6.4e-17	35.66	Mitotic spindle assembly checkpoint protein MAD2B OS=Mus musculus OX=10090 GN=Ma...	[more]
D3Z8D9	6.4e-17	35.66	Mitotic spindle assembly checkpoint protein MAD2B OS=Rattus norvegicus OX=10116 ...	[more]

BLAST of PI0024260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C494	5.3e-67	97.12	DNA polymerase zeta processivity subunit isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5D3DV44	5.3e-67	97.12	DNA polymerase zeta processivity subunit isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0KEI1	1.6e-66	97.14	HORMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139220 PE=4 ...	[more]
A0A6J1G790	1.8e-62	89.21	DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1I0B4	3.4e-61	88.41	DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of PI0024260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054619.1	1.1e-66	97.12	DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo var. makuwa] >...	[more]
XP_008456336.1	1.1e-66	97.12	PREDICTED: DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo] >X...	[more]
XP_004145804.1	3.2e-66	97.14	DNA polymerase zeta processivity subunit isoform X1 [Cucumis sativus] >KGN46822....	[more]
XP_038900295.1	2.7e-65	94.24	DNA polymerase zeta processivity subunit [Benincasa hispida] >XP_038900296.1 DNA...	[more]
XP_022947726.1	3.7e-62	89.21	DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >XP_022...	[more]

BLAST of PI0024260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16590.1	5.7e-45	69.29	DNA-binding HORMA family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003511	HORMA domain	PFAM	PF02301	HORMA	coord: 17..113 e-value: 8.7E-9 score: 35.3
IPR003511	HORMA domain	PROSITE	PS50815	HORMA	coord: 12..145 score: 29.114315
IPR036570	HORMA domain superfamily	GENE3D	3.30.900.10	HORMA domain	coord: 9..143 e-value: 8.8E-34 score: 118.8
IPR036570	HORMA domain superfamily	SUPERFAMILY	56019	The spindle assembly checkpoint protein mad2	coord: 12..140
None	No IPR available	PANTHER	PTHR11842:SF10	MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B	coord: 1..140
IPR045091	Mad2-like	PANTHER	PTHR11842	MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024260.1	PI0024260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0010224	response to UV-B
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016035	zeta DNA polymerase complex
molecular_function	GO:0003677	DNA binding