PI0024185 (gene) Melon (PI 482460) v1

Overview


Name	PI0024185
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Late embryogenesis abundant protein family protein, putative
Location	chr05: 12736759 .. 12739881 (-)
RNA-Seq Expression	PI0024185
Synteny	PI0024185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATCTTCAAATTTCTCTTCTCGTATATATTTCTTAAAGTTAAAAGAAAAATGGCAAGATCCACCCTCTTTAAAAGCCTTCCGAAGTTTGGTCATTTTGGTGGTGCAATTACAAGAAGATTAACAACCTCCAAACCTACTCTCATTTTGTCTTCCAACCCTAAATTTATTCATGTAAGTGTTGTTTACAATGCTTCACGTTTCATCGAATATTTGAAATTGTAAATTAACCTTAATGTTTGTATAGCTCATCTTACATGGTGCTGTTAAACTAAAAAAGAAAGGTACTGGTTAGGATTAAGGTCCTCCAGCATATTCCCACTATGATATTATATTTTTCATTTTAGACATAAAATCCCATGACTTTGTATTTTTGTTTCATCCCAAAAGACTGTTTTGGTTGTAGGGCAAATATGAACATAAAGTCATTGGACTAATATCTTAACAACATAAAGAAAAATGTTATTTTTTGACCATGGATGTAAAAATTTAAGTCTGCAATGTATACACTCGAGAAAAGAGTTTATAAATTCATACATTTTTCTTTAAATTAGTGTAATTCATACCGAGAAGATGTGGAGATTCAAAGGCGTCGGAGGAGAGTTTAAAAAGATAGCCAATATCTTAATTAATTTTTTGAATGGTGTGAATAATCCTTTAGTTTTAAAGAAAAAGTTATATTTTTGGTGTATTTTGCACAGACAAGTCAACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACACAGGAGCTAATGAAGAAATGATAATGCCTGGGGAAAATATGATGAATCATAAGGCTTACTCTACTGCAGAACATGTAATAAAACTCCAAGATATTTCATTATGTTTCTTTATCTAAAAAAAAAATCTTTTTCTTACATATCTATTTTTGTGTATTATATTTATTTATTAAAACAATTTTTTTTTCTTTTTGGAAAAATTACCTTTTTCTATAAGGTTGTTATTAGTATTTTAAAATTAATTATAAGTTTTTATAATTATTTTTAAAATATTTATATGACATTTTAAAAAAAATTAAAAAATATTTTCTTTTCTCTCTCTTCTTCTCTTCCTTTACCACCCTTCCTCTCTCTGTTCGGTTTCTCATAGTGAGGTTCATGACCAAACCACTTGCTCAGCTTCATATGATCGAGAATGCCATCATCTCTATCGTCGAACATAATTCCCTAAATACCTATTAGTTTGCTAATTGATTAGATATTAAAATCCACCCTTCCTAGTTCCCACCACTGGATATTCAGTTATGACTTCCTCAACACATTATACTCATTAACCAACCGATTTCTTTGTATTCGTGCCCTCTTTCCTTCGAAATTATCCAAATCAAGATTTGGACCCTCTTTCTCTCCAACTTTCAAATAAAAAATATTCAAATCAATTGGTTAAGTGGAGTTTTATGCTTCTTGGTGAGACCGTAGGCCCGCAGCTAGGTGCTAGCGCTAGAATATGCAGATTTGAACTCTGAATTGAAGGCCAAGAACGTGCTTTTGGTGCAGCAGTACGATATATGTTCAAGGATTTTCCATTAGGATTATCCATCCTTCCTTGCCAGGAAGAAGGTGAGGGAGTGGAGGAGGGAGATGGAAGAGAGGGGAGAGAGAATTTTTTTTAAAAAAAGTTTTAAGATGTCATATAAATATTTACAATAATTATAACAGCTTATAATTAATTTTAAAATGGTAATAACCACCTATTTTTCAAAATTAAGGTATAAAATTGGATAAATTGAAACTTGGGACCATTGCACCTATTACTAAAAATGTAGTTTTTCATTTTTTTTCTTTCTTTCTTTTTAATAGCCATTTTAAAATTTAAAACTAAATTTGATTTTATAAATTTTTTTTTCTGAGTTTCAATTTTAAATTTTAAATTTTAAATGAAGCTTATAAACATTCCTTCCATTTTTCATTTATTTTCAATTAACATTTTTTAGGGAAAAAAATCTAAGAATTTAAATGTGTTTTTAATAATCAAGTAAAAAGAATACTTAAAATGATGAGAACACAAATCTATTTGATTATAAGAGAGATTAAAAAAAACGAAATGATGAAGAAAAGTTACAATAATTGTCAATTTAGTCCCGTACATTCAAACGATCTTAATAATAATAATAATAATAATAATAATAATAATAATAATAATATTTTTTTGAAAAATGGTAAAAAATGGCAAAGTAATATGCAAGAATTAAAAGTTACAATGTGACTGCAAAATAATATGTATAAAGAAAATGGTAGAAGAGACTAATAGTTTTTTAATAACTAACCATAAATGAACAACAATAACTTAAAAGTCAAGATTTGATAGAAAGTAAAATGGACATTCAAAAATACAAAGATTAAAATATAACAAAACTCCACAATTTTGAAACAAAAATGTTATTTCAATCTCTTCTTTTTAGTTATTCAACATTGTGGGAGCAAGAATTTGTGGGTGATCGAACTATGGATCTCCAAAATAATAATCAACGGCTTATCCATTAATTCAGTTTGAAAAGAAGTAATAACTAGCAGTGGAATAAACGATGTCAAACGGTACTTAATGTTTGGTCGACATTTGTTGTTAATTAGTAATAATAAATATTAATGATTGGAATAAGAAGTATGCATGCGATTTGATATTATTAACATGAAATAGTGTGTGTATATATAATAATTATAGGTGAGAGAAACAGCAAATGAAGTTTCAACAAAAGCAAAGGAAGGAATGGAAGCAGCATGGGATTCTGCAAAGGACACAGCCCAAAGGGCAAAAGACACATTGGTTGACACTGCCGATGACTCTAAGGAATTTGTCAAAGCAAATGCTAAGTCTGTTGAGAAGAGCATGAACACCAAGAACCGTTCTTAAATCCCCATAAACTCTCTTCTCAAACTTAGCCTTTTTTTTTTTTTTTCCTTTTTAATTGTTCCTTAATTCCAATAAAGCTAGGTGTAGCTATATTGAAATTTGGACTGTGTTGTGAGAATTATCGATCAATCCAAAGGCTTATAAGCTGGGTTTTGATAATCAATGTTATGACATTAAATATTGTCCCCTGCTTTTGGAATTGATCTGTATTAATTGAGGAAGAAAATTATGTCCCATTGTTTTGAATA

mRNA sequence

CTCATCTTCAAATTTCTCTTCTCGTATATATTTCTTAAAGTTAAAAGAAAAATGGCAAGATCCACCCTCTTTAAAAGCCTTCCGAAGTTTGGTCATTTTGGTGGTGCAATTACAAGAAGATTAACAACCTCCAAACCTACTCTCATTTTGTCTTCCAACCCTAAATTTATTCATACAAGTCAACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACACAGGAGCTAATGAAGAAATGATAATGCCTGGGGAAAATATGATGAATCATAAGGCTTACTCTACTGCAGAACATGTGAGAGAAACAGCAAATGAAGTTTCAACAAAAGCAAAGGAAGGAATGGAAGCAGCATGGGATTCTGCAAAGGACACAGCCCAAAGGGCAAAAGACACATTGGTTGACACTGCCGATGACTCTAAGGAATTTGTCAAAGCAAATGCTAAGTCTGTTGAGAAGAGCATGAACACCAAGAACCGTTCTTAAATCCCCATAAACTCTCTTCTCAAACTTAGCCTTTTTTTTTTTTTTTCCTTTTTAATTGTTCCTTAATTCCAATAAAGCTAGGTGTAGCTATATTGAAATTTGGACTGTGTTGTGAGAATTATCGATCAATCCAAAGGCTTATAAGCTGGGTTTTGATAATCAATGTTATGACATTAAATATTGTCCCCTGCTTTTGGAATTGATCTGTATTAATTGAGGAAGAAAATTATGTCCCATTGTTTTGAATA

Coding sequence (CDS)

ATGGCAAGATCCACCCTCTTTAAAAGCCTTCCGAAGTTTGGTCATTTTGGTGGTGCAATTACAAGAAGATTAACAACCTCCAAACCTACTCTCATTTTGTCTTCCAACCCTAAATTTATTCATACAAGTCAACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACACAGGAGCTAATGAAGAAATGATAATGCCTGGGGAAAATATGATGAATCATAAGGCTTACTCTACTGCAGAACATGTGAGAGAAACAGCAAATGAAGTTTCAACAAAAGCAAAGGAAGGAATGGAAGCAGCATGGGATTCTGCAAAGGACACAGCCCAAAGGGCAAAAGACACATTGGTTGACACTGCCGATGACTCTAAGGAATTTGTCAAAGCAAATGCTAAGTCTGTTGAGAAGAGCATGAACACCAAGAACCGTTCTTAA

Protein sequence

MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGANEEMIMPGENMMNHKAYSTAEHVRETANEVSTKAKEGMEAAWDSAKDTAQRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS

Homology

[Close]

BLAST of PI0024185 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 19  AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGANEEMIMPGENMMNHKAYST 78
           A+  RL T  P +  S   + +H +     S  KD++   A E      +  +  KA   
Sbjct: 5   AVVARLITRAPRVRASVPTRLVHGTT----STRKDSVCDKATE-----AQQKVAKKADEG 64

Query: 79  AEHVRETANEVSTKAKEGMEAAWDSAKDTAQRAKDTLVDTADDSKEFVKANAKSVEKSMN 138
           A+ + + A  +  KAK   E AWD  KDT ++ KDT+    +++KE +KA AK+VE+SMN
Sbjct: 65  AQTISDAAGNLKDKAKNTAEEAWDKVKDTTEKIKDTVTGKTEETKESIKATAKTVERSMN 118

Query: 139 TKN 142
           TKN
Sbjct: 125 TKN 118

[Close]

BLAST of PI0024185 vs. ExPASy TrEMBL
Match: A0A6J1F3W7 (uncharacterized protein At4g13230 OS=Cucurbita moschata OX=3662 GN=LOC111439943 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.4e-38
Identity = 103/155 (66.45%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGG-AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGA 60
           M  STLFKSLPKFGHFG  AI RR  TS  +L+ +SNPKFIHT+ PQDGSEAKDAIN  A
Sbjct: 1   MGSSTLFKSLPKFGHFGAPAIARRSPTSNTSLLFASNPKFIHTNPPQDGSEAKDAINPEA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE M  PGE+MM  KAYSTAEHV E            A EVS KAKE MEA    AKD+A
Sbjct: 61  NEGM-TPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKEAMEA----AKDSA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
            RAKDT+V+T  DSK+FVKANAK+VEK MNTKNRS
Sbjct: 121 HRAKDTVVETTKDSKQFVKANAKTVEKCMNTKNRS 150

[Close]

BLAST of PI0024185 vs. ExPASy TrEMBL
Match: A0A6J1ICL4 (uncharacterized protein At4g13230 OS=Cucurbita maxima OX=3661 GN=LOC111472556 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-35
Identity = 99/155 (63.87%), Postives = 109/155 (70.32%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGA-ITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGA 60
           M  STLFKSLPKFGHFG A I  R  TS  +L  +SNPKFIHT+ PQDGSEAKDAIN  A
Sbjct: 1   MGSSTLFKSLPKFGHFGAAVIAWRSPTSNTSLRFASNPKFIHTNPPQDGSEAKDAINPEA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE M   GE MM  KAYSTAEHV E            A EVS KAK+ MEA    AKD+A
Sbjct: 61  NEGM-TSGEQMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKQAMEA----AKDSA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
            RAKD++V+T  DSK+FVKANAK+VEK MNTKNRS
Sbjct: 121 HRAKDSVVETTKDSKQFVKANAKTVEKCMNTKNRS 150

[Close]

BLAST of PI0024185 vs. ExPASy TrEMBL
Match: A0A6J1CSM2 (uncharacterized protein At4g13230-like OS=Momordica charantia OX=3673 GN=LOC111014202 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-35
Identity = 97/155 (62.58%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIHTSQPQD-----GSEAKDAI 60
           MA  TL K+LPKF H G AI RR T S P L+L SNPKF+HT  PQD       EAKDAI
Sbjct: 1   MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHTGSPQDAINPGAPEAKDAI 60

Query: 61  NTGANEEMIMPGENMMNHKAYSTAEHVRETA--------NEVSTKAKEGMEAAWDSAKDT 120
           N GANE M MPGE+MM  +AYSTA+HVRE A        +E+S KAK+ MEAAWDS    
Sbjct: 61  NPGANEAM-MPGESMMT-EAYSTAQHVREKASDMGGMVXSEISEKAKQTMEAAWDS---- 120

Query: 121 AQRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNR 143
           AQRAKDT+V+   +SKEFVKANA+SV+KSMNTKNR
Sbjct: 121 AQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR 149

[Close]

BLAST of PI0024185 vs. ExPASy TrEMBL
Match: A0A2N9J2L7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58716 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-21
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIH-TSQPQDGSEAKDAINTGA 60
           MA  +L   LPKFGH G AI RR  T  P L ++SNP+ I  +S P+  S A DA+  GA
Sbjct: 1   MASLSLVTCLPKFGHAGAAIARR-NTWNPRLFVASNPRLIQASSNPEASSVATDALKQGA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           N+     G+ + N KA+STAEHV +           TA +V+ KAK+  + AW +AKDTA
Sbjct: 61  NDAK-KTGDTVKN-KAFSTAEHVTQKTKDMAGMMSATAQDVTEKAKQTAQEAWGTAKDTA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKN 142
           Q+AKDT++  A++SKE +K NA++V++SMNTKN
Sbjct: 121 QKAKDTVLGKAEESKECIKENAETVKESMNTKN 150

[Close]

BLAST of PI0024185 vs. ExPASy TrEMBL
Match: A0A7N2KQQ7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.5e-18
Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIH-TSQPQDGSEAKDAINTGA 60
           MA  TL  SLPKFGH G AI RR +T  P L  +  P+ I  +S P+  S A DA+  GA
Sbjct: 1   MASLTLIVSLPKFGHAGSAIVRR-STWNPRLFAACTPRPIQASSNPEASSPATDALKQGA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE     GE + + KA STAEHV +           TA +V+ K K+  + AW SAKDTA
Sbjct: 61  NEAK-KTGETVKD-KANSTAEHVSQNTKDMAGKMSATAQDVTEKVKQTAQEAWGSAKDTA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKN 142
           Q+AKD ++   ++SKE +K +A++V+ SMNTKN
Sbjct: 121 QKAKDNVLGKTEESKESIKESAEAVKNSMNTKN 150

[Close]

BLAST of PI0024185 vs. NCBI nr
Match: XP_038889268.1 (uncharacterized protein At4g13230-like [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 117/154 (75.97%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGAN 60
           MA STLFK+LPKFGHFG AITRR TTS  TLIL+SNPKFIHT+  QDGSEAKDAIN GAN
Sbjct: 1   MASSTLFKNLPKFGHFGAAITRRSTTSNTTLILASNPKFIHTNLSQDGSEAKDAINPGAN 60

Query: 61  EEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTAQ 120
           E M MPGENMM  KAYSTAEHV E            A+ VS KAK+ MEAAWDSAKDTAQ
Sbjct: 61  EGM-MPGENMMKDKAYSTAEHVSEKTKDMAGMVSAKAHAVSAKAKQAMEAAWDSAKDTAQ 120

Query: 121 RAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
           RAKDTLVDTA+DSK+FVKAN KSVEKSMNTKN S
Sbjct: 121 RAKDTLVDTANDSKQFVKANVKSVEKSMNTKNHS 153

[Close]

BLAST of PI0024185 vs. NCBI nr
Match: XP_022933143.1 (uncharacterized protein At4g13230 [Cucurbita moschata])

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-38
Identity = 103/155 (66.45%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGG-AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGA 60
           M  STLFKSLPKFGHFG  AI RR  TS  +L+ +SNPKFIHT+ PQDGSEAKDAIN  A
Sbjct: 1   MGSSTLFKSLPKFGHFGAPAIARRSPTSNTSLLFASNPKFIHTNPPQDGSEAKDAINPEA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE M  PGE+MM  KAYSTAEHV E            A EVS KAKE MEA    AKD+A
Sbjct: 61  NEGM-TPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKEAMEA----AKDSA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
            RAKDT+V+T  DSK+FVKANAK+VEK MNTKNRS
Sbjct: 121 HRAKDTVVETTKDSKQFVKANAKTVEKCMNTKNRS 150

[Close]

BLAST of PI0024185 vs. NCBI nr
Match: KAG6598970.1 (hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 101/155 (65.16%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGG-AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGA 60
           M   TLFKSLPKFGHFG  AI RR  TS  +L+ +SNPK IHT+ PQDGSEAKDAIN  A
Sbjct: 1   MGSYTLFKSLPKFGHFGAPAIARRSPTSNTSLLFASNPKSIHTNPPQDGSEAKDAINPEA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE M  PGE+MM  KAYSTAEHV E            A EVS KAKE MEA    AKD+A
Sbjct: 61  NEGM-TPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKEAMEA----AKDSA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
            RAKDT+V+T  DSK+FVKANAK+VEK MNTKNRS
Sbjct: 121 HRAKDTVVETTKDSKQFVKANAKTVEKCMNTKNRS 150

[Close]

BLAST of PI0024185 vs. NCBI nr
Match: XP_023546410.1 (uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.4 bits (407), Expect = 5.8e-36
Identity = 100/155 (64.52%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGG-AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGA 60
           M  STLFKSLPKFGHFG  AI RR  TS  +L+ +SNPK IHT+ PQDG EAKDAI   A
Sbjct: 1   MGSSTLFKSLPKFGHFGAPAIARRSPTSNTSLLFASNPKSIHTNPPQDGLEAKDAIKPEA 60

Query: 61  NEEMIMPGENMMNHKAYSTAEHVRE-----------TANEVSTKAKEGMEAAWDSAKDTA 120
           NE M  PGE+MM  KAYSTAEHV E            A EVS KAKE MEA    AKD+A
Sbjct: 61  NEGM-TPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKEAMEA----AKDSA 120

Query: 121 QRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNRS 144
            RAKDT+V+T  DSK+FVKANAK+VEK MNTKNRS
Sbjct: 121 HRAKDTVVETTKDSKQFVKANAKTVEKCMNTKNRS 150

[Close]

BLAST of PI0024185 vs. NCBI nr
Match: XP_022144549.1 (uncharacterized protein At4g13230-like [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 6.4e-35
Identity = 97/155 (62.58%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MARSTLFKSLPKFGHFGGAITRRLTTSKPTLILSSNPKFIHTSQPQD-----GSEAKDAI 60
           MA  TL K+LPKF H G AI RR T S P L+L SNPKF+HT  PQD       EAKDAI
Sbjct: 1   MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHTGSPQDAINPGAPEAKDAI 60

Query: 61  NTGANEEMIMPGENMMNHKAYSTAEHVRETA--------NEVSTKAKEGMEAAWDSAKDT 120
           N GANE M MPGE+MM  +AYSTA+HVRE A        +E+S KAK+ MEAAWDS    
Sbjct: 61  NPGANEAM-MPGESMMT-EAYSTAQHVREKASDMGGMVXSEISEKAKQTMEAAWDS---- 120

Query: 121 AQRAKDTLVDTADDSKEFVKANAKSVEKSMNTKNR 143
           AQRAKDT+V+   +SKEFVKANA+SV+KSMNTKNR
Sbjct: 121 AQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR 149

[Close]

BLAST of PI0024185 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 19  AITRRLTTSKPTLILSSNPKFIHTSQPQDGSEAKDAINTGANEEMIMPGENMMNHKAYST 78
           A+  RL T  P +  S   + +H +     S  KD++   A E      +  +  KA   
Sbjct: 5   AVVARLITRAPRVRASVPTRLVHGTT----STRKDSVCDKATE-----AQQKVAKKADEG 64

Query: 79  AEHVRETANEVSTKAKEGMEAAWDSAKDTAQRAKDTLVDTADDSKEFVKANAKSVEKSMN 138
           A+ + + A  +  KAK   E AWD  KDT ++ KDT+    +++KE +KA AK+VE+SMN
Sbjct: 65  AQTISDAAGNLKDKAKNTAEEAWDKVKDTTEKIKDTVTGKTEETKESIKATAKTVERSMN 118

Query: 139 TKN 142
           TKN
Sbjct: 125 TKN 118

The following BLAST results are available for this feature:

BLAST of PI0024185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFD5	2.2e-09	34.96	Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 P...	[more]

BLAST of PI0024185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3W7	1.4e-38	66.45	uncharacterized protein At4g13230 OS=Cucurbita moschata OX=3662 GN=LOC111439943 ...	[more]
A0A6J1ICL4	3.1e-35	63.87	uncharacterized protein At4g13230 OS=Cucurbita maxima OX=3661 GN=LOC111472556 PE...	[more]
A0A6J1CSM2	3.1e-35	62.58	uncharacterized protein At4g13230-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2N9J2L7	4.4e-21	47.06	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58716 PE=4 SV=1	[more]
A0A7N2KQQ7	4.5e-18	45.75	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of PI0024185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889268.1	2.1e-49	75.97	uncharacterized protein At4g13230-like [Benincasa hispida]	[more]
XP_022933143.1	2.8e-38	66.45	uncharacterized protein At4g13230 [Cucurbita moschata]	[more]
KAG6598970.1	1.2e-36	65.16	hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023546410.1	5.8e-36	64.52	uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]	[more]
XP_022144549.1	6.4e-35	62.58	uncharacterized protein At4g13230-like [Momordica charantia]	[more]

BLAST of PI0024185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13230.1	1.5e-10	34.96	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 2..141
None	No IPR available	PANTHER	PTHR47372:SF21	LATE EMBRYOGENESIS ABUNDANT PROTEIN, GROUP 3-LIKE	coord: 2..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024185.1	PI0024185.1	mRNA