PI0024156 (gene) Melon (PI 482460) v1

Overview
NamePI0024156
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 4427533 .. 4428250 (+)
RNA-Seq ExpressionPI0024156
SyntenyPI0024156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATAACTTGCATCCCCTTTCTTTCTTTCTTCTTCTTCTTCCTCCTCTTTTTTCTCTCTCTTTCTCCGATTTCAATTCTCCGAATTCACAGCGAAGCGAAAGGTTTTAGCTTCCATTACTTGTCTGGTTTTAAGCCTCTTTTCCGCTTTTCAAGGTTGGTAGTCAAACTCTCTTCCTTCTTCTGTCGTTTATCCTTTAAATGGTCTTATTTCATTTTGTTGTTCGTTCCGGTTTTTTTTTTTTCTTTCTAATCGGTTCGGATTTGGATCCTTGTCACCCCCTTTTTCTTTTTGCTTCTTGTTCTTGCTTGATCTTTTGCCTTTTCTTCGATTTTAATGCTTAATTTTAACTTTAGCTATGAGTTTTGGGAGGTGCAGCTCTCTCTGTCTGTTTCTTTCTTTCAAAAATTGAACCTTGATTATTCAAATTGGTGTTTGATTTCTGAAGTGGCGTGCTATATAATTTCATTTCTGTTCCTTTTGGTTAAGATAGGCGAGAAATTGGGTGTTGAAAGTTGTTATTTGAATTACGTTTTTGTTTCCCATTGAGGCTGGCTCTGCCACTTGTGAAATGTTTCTTATATGTGGGGAACTGTTTTTTCTTTTTGAATTTTTATACTGGTCGTTGGTGGGTTTTCTTTTTCTTTTTACTTTTCCTCTGCTAATGTTGTTATATCTGTTTAACCTTAGGGACTTCTGGATGTTGTTGAAATAG

mRNA sequence

ATGTATATAACTTGCATCCCCTTTCTTTCTTTCTTCTTCTTCTTCCTCCTCTTTTTTCTCTCTCTTTCTCCGATTTCAATTCTCCGAATTCACAGCGAAGCGAAAGGTTTTAGCTTCCATTACTTGTCTGGTTTTAAGCCTCTTTTCCGCTTTTCAAGGGACTTCTGGATGTTGTTGAAATAG

Coding sequence (CDS)

ATGTATATAACTTGCATCCCCTTTCTTTCTTTCTTCTTCTTCTTCCTCCTCTTTTTTCTCTCTCTTTCTCCGATTTCAATTCTCCGAATTCACAGCGAAGCGAAAGGTTTTAGCTTCCATTACTTGTCTGGTTTTAAGCCTCTTTTCCGCTTTTCAAGGGACTTCTGGATGTTGTTGAAATAG

Protein sequence

MYITCIPFLSFFFFFLLFFLSLSPISILRIHSEAKGFSFHYLSGFKPLFRFSRDFWMLLK
Homology
[Close]
BLAST of PI0024156 vs. ExPASy TrEMBL
Match: A0A0A0KPV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173540 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15
Identity = 50/68 (73.53%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 1  MYITCIPFLSFFFFFLLFF--------LSLSPISILRIHSEAKGFSFHYLSGFKPLFRFS 60
          MYITCIPFL FF   LL F        LSLSPISILRIHS+AKGFSFHY SGF  LFRFS
Sbjct: 1  MYITCIPFLPFFLLLLLLFLLLFPLFSLSLSPISILRIHSQAKGFSFHYFSGFNSLFRFS 60

[Close]
BLAST of PI0024156 vs. NCBI nr
Match: KGN50427.1 (hypothetical protein Csa_000086 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15
Identity = 50/68 (73.53%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 1  MYITCIPFLSFFFFFLLFF--------LSLSPISILRIHSEAKGFSFHYLSGFKPLFRFS 60
          MYITCIPFL FF   LL F        LSLSPISILRIHS+AKGFSFHY SGF  LFRFS
Sbjct: 1  MYITCIPFLPFFLLLLLLFLLLFPLFSLSLSPISILRIHSQAKGFSFHYFSGFNSLFRFS 60

The following BLAST results are available for this feature:
BLAST of PI0024156 vs.
Match NameE-valueIdentityDescription
BLAST of PI0024156 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPV54.4e-1573.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173540 PE=4 SV=1[more]
BLAST of PI0024156 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50427.19.0e-1573.53hypothetical protein Csa_000086 [Cucumis sativus][more]
BLAST of PI0024156 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024156.1PI0024156.1mRNA