PI0024155 (gene) Melon (PI 482460) v1

Overview


Name	PI0024155
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 15891279 .. 15891617 (-)
RNA-Seq Expression	PI0024155
Synteny	PI0024155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTCTCATTCCATTCCTTTACAAAGCCATTTTACAGTACAAAAATGGCAGTAATGAAACCAACAATAATATGAATCAACCTTCTTCATATTGGTGGTGTGATGATGATCATCAGTCTCCTCCTACTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGATTACATCAATAATAGTACTACTAATAATAATAATCTTCCCTTTTCTTCTTCTTCTTCCACTTTTAATGACACTAAAAGTGTCATAATATCATCTAATTCAGGGATTCAATCTCCTTTGTGTCATTTGCTTTCCAATAGAGTGGTTGCTTGA

mRNA sequence

ATGGAGGGTCTCATTCCATTCCTTTACAAAGCCATTTTACAGTACAAAAATGGCAGTAATGAAACCAACAATAATATGAATCAACCTTCTTCATATTGGTGGTGTGATGATGATCATCAGTCTCCTCCTACTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGATTACATCAATAATAGTACTACTAATAATAATAATCTTCCCTTTTCTTCTTCTTCTTCCACTTTTAATGACACTAAAAGTGTCATAATATCATCTAATTCAGGGATTCAATCTCCTTTGTGTCATTTGCTTTCCAATAGAGTGGTTGCTTGA

Coding sequence (CDS)

ATGGAGGGTCTCATTCCATTCCTTTACAAAGCCATTTTACAGTACAAAAATGGCAGTAATGAAACCAACAATAATATGAATCAACCTTCTTCATATTGGTGGTGTGATGATGATCATCAGTCTCCTCCTACTTCTTCTTCTTCTTCTTCAGAAGCTTTATATGTAAGACTTGCAGGTGATGATCAAGATTACATCAATAATAGTACTACTAATAATAATAATCTTCCCTTTTCTTCTTCTTCTTCCACTTTTAATGACACTAAAAGTGTCATAATATCATCTAATTCAGGGATTCAATCTCCTTTGTGTCATTTGCTTTCCAATAGAGTGGTTGCTTGA

Protein sequence

MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGDDQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA

Homology

[Close]

BLAST of PI0024155 vs. ExPASy TrEMBL
Match: A0A0A0L2A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNET-NNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAG 60
           MEGLIPFLYKAILQYKNG++ET NNNMNQPSSYWWCD DHQSPP SSSSSSEALYVRLAG
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPP-SSSSSSEALYVRLAG 60

Query: 61  DDQDYINNSTTNNNNLPF--SSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           DDQDYIN +T  NNNLPF  SSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA
Sbjct: 61  DDQDYINTNT--NNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

[Close]

BLAST of PI0024155 vs. ExPASy TrEMBL
Match: B9T7Q8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0207600 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNM--NQPSSYWWCDDDHQSPPTSSSSSSEALYVRLA 60
           MEGLIPF+Y+AI+QYKNG+     +     PSS   C   +   PT  S   +A  +RL 
Sbjct: 1   MEGLIPFVYRAIMQYKNGNEGPLGSWLNESPSS---C---YMRLPTGDSGRFQASDIRLF 60

Query: 61  GDDQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           G D  +   STT N N   SSSS   + T  +++S  +G QSPLC L   RV A
Sbjct: 61  GSDYGFSTTSTTTNTNTITSSSSIKSSTTTQILVS--TGAQSPLCSLTPRRVAA 106

[Close]

BLAST of PI0024155 vs. ExPASy TrEMBL
Match: A0A0L9VTE1 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g124200 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-04
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPF+YKAI+QYKNG          P   W CD            SS   Y++L GD
Sbjct: 1   MEGLIPFVYKAIMQYKNG-------RQGPIVSWLCD------------SSSYSYMKLPGD 60

Query: 61  D------------QDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSN 111
                         +Y+ +ST++      SSSS   + T  ++ SS+  +QSP CHL S 
Sbjct: 61  SGRFQTSASSLFGSEYVLSSTSS------SSSSKPGSSTTQIMFSSS--VQSPSCHLNSP 95

[Close]

BLAST of PI0024155 vs. ExPASy TrEMBL
Match: A0A0S3SWE1 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G055500 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-04
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPF+YKAI+QYKNG          P   W CD            SS   Y++L GD
Sbjct: 1   MEGLIPFVYKAIMQYKNG-------RQGPIVSWLCD------------SSSYSYMKLPGD 60

Query: 61  D------------QDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSN 111
                         +Y+ +ST++      SSSS   + T  ++ SS+  +QSP CHL S 
Sbjct: 61  SGRFQTSASSLFGSEYVLSSTSS------SSSSKPGSSTTQIMFSSS--VQSPSCHLNSP 95

[Close]

BLAST of PI0024155 vs. ExPASy TrEMBL
Match: A0A059D723 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02706 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.5e-04
Identity = 45/122 (36.89%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPF+Y+AI+QY+NG+         P + W+        P S S+S    Y+RL GD
Sbjct: 1   MEGLIPFVYRAIVQYRNGN-------QGPLATWF--------PESPSAS----YMRLPGD 60

Query: 61  -------DQDYINNSTTNNNNLPFS---SSSSTFNDTKSVIISSNSGIQSPLCHLLSNRV 113
                  D  +       NN +  S   S+++T   T  V++S  SG+QSP+C L + RV
Sbjct: 61  SGRFQASDIHFFRPDCGFNNTMTPSAATSTATTMTSTTQVLVS--SGVQSPVCRLTTRRV 101

[Close]

BLAST of PI0024155 vs. NCBI nr
Match: KGN54276.1 (hypothetical protein Csa_018169 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 2.7e-44
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNET-NNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAG 60
           MEGLIPFLYKAILQYKNG++ET NNNMNQPSSYWWCD DHQSPP SSSSSSEALYVRLAG
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPP-SSSSSSEALYVRLAG 60

Query: 61  DDQDYINNSTTNNNNLPF--SSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           DDQDYIN +T  NNNLPF  SSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA
Sbjct: 61  DDQDYINTNT--NNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

[Close]

BLAST of PI0024155 vs. NCBI nr
Match: KAG7033819.1 (hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7033820.1 hypothetical protein SDJN02_03545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08
Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPFLYKAI+ Y+NG N+ +   +QPS  W CD+         S S+ A YVRLAGD
Sbjct: 1   MEGLIPFLYKAIVHYRNGYNQAD---SQPS--WRCDE---------SPSASASYVRLAGD 60

Query: 61  DQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           +QD              S+SSS+F++  SV IS+ SGIQSPL  L+ +RV A
Sbjct: 61  EQD--------------SASSSSFSN-GSVRISA-SGIQSPLRRLVPHRVAA 82

[Close]

BLAST of PI0024155 vs. NCBI nr
Match: KAG6603637.1 (hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-08
Identity = 54/112 (48.21%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPFLYKAI+ Y+NG N+ +   +QPS  W CD+         S S+ A YVRLAGD
Sbjct: 1   MEGLIPFLYKAIVHYRNGYNQAD---SQPS--WRCDE---------SPSASASYVRLAGD 60

Query: 61  DQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           +QD              S+SSS+F++  SV IS+ SGIQSPL  L+  RV A
Sbjct: 61  EQD--------------SASSSSFSN-GSVRISA-SGIQSPLRRLVPRRVAA 82

[Close]

BLAST of PI0024155 vs. NCBI nr
Match: XP_002534277.1 (uncharacterized protein LOC8261800 [Ricinus communis] >EEF28108.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07
Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNM--NQPSSYWWCDDDHQSPPTSSSSSSEALYVRLA 60
           MEGLIPF+Y+AI+QYKNG+     +     PSS   C   +   PT  S   +A  +RL 
Sbjct: 1   MEGLIPFVYRAIMQYKNGNEGPLGSWLNESPSS---C---YMRLPTGDSGRFQASDIRLF 60

Query: 61  GDDQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 113
           G D  +   STT N N   SSSS   + T  +++S  +G QSPLC L   RV A
Sbjct: 61  GSDYGFSTTSTTTNTNTITSSSSIKSSTTTQILVS--TGAQSPLCSLTPRRVAA 106

[Close]

BLAST of PI0024155 vs. NCBI nr
Match: KAG6595338.1 (hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06
Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 1   MEGLIPFLYKAILQYKNGSNETNNNMNQPSSYWWCDDDHQSPPTSSSSSSEALYVRLAGD 60
           MEGLIPF+YKAI++++NG+N         S   WC D          S S A Y RL GD
Sbjct: 1   MEGLIPFVYKAIVEFRNGNN---------SQTMWCCD----------SPSSASYQRLPGD 60

Query: 61  DQDYINNSTTNNNNLPFSSSSSTFNDTKSVIISSNSGIQSPLCH 105
           D +  N +  ++++   SSSSS+ + + SV+IS +   QSPLC+
Sbjct: 61  DDELHNINGASSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCN 85

The following BLAST results are available for this feature:

BLAST of PI0024155 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024155 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2A8	1.3e-44	90.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1	[more]
B9T7Q8	1.6e-07	42.11	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0207600 PE=4 SV=1	[more]
A0A0L9VTE1	5.0e-04	36.89	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g124200 PE...	[more]
A0A0S3SWE1	5.0e-04	36.89	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G...	[more]
A0A059D723	8.5e-04	36.89	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02706 PE=4 SV...	[more]

BLAST of PI0024155 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54276.1	2.7e-44	90.43	hypothetical protein Csa_018169 [Cucumis sativus]	[more]
KAG7033819.1	1.4e-08	48.21	hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6603637.1	1.8e-08	48.21	hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_002534277.1	3.4e-07	42.11	uncharacterized protein LOC8261800 [Ricinus communis] >EEF28108.1 conserved hypo...	[more]
KAG6595338.1	1.7e-06	40.38	hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0024155 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..51
None	No IPR available	PANTHER	PTHR34670:SF8	EXPRESSED PROTEIN	coord: 1..111
None	No IPR available	PANTHER	PTHR34670	EXPRESSED PROTEIN	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024155.1	PI0024155.1	mRNA