PI0024133 (gene) Melon (PI 482460) v1

Overview
NamePI0024133
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 19810280 .. 19811365 (-)
RNA-Seq ExpressionPI0024133
SyntenyPI0024133
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGACAAGAATGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAACGGTGGAAATGCTGACGCATCCAAACCTGCAGCGTCTCCGTTGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTGTTCGGCTAGTTTTATGTTCATTTACAAGTCCATGTAGCCGATGTCTACTACTCCATACATGCTTGAGCAAGGCATGATCCTCTGCAGCTTAACCAACATCCATCAGTTCTCAATTTCATCACGTGTCAAAAGTTACGAGTAATATTTTATGTAGCTCTGAACCATTTGGGTACCTGAAATCTTGGCTTGACTTGGTTGCCAAGCATGAAAGGCGCAGGTCATCAAGTTATGTAATGTCAAATACCCCCTGTTAAAACATGTATTATTTCAAGATTCTCAACAATTCAATATAATGTCACAGTTATATATTTGATACATATGAGATATGATATAAACTATGCAATATGGTCATTTAAATACATACTTAGCACATCCGTCACCAAGTGTCAACTGATTTAATTAATTCTATGGTCTCTATCGGCCAAATCAAACAAACATGTAAGTAATACTTTTCTGAGCGTAAAACTAATTACTGTGACAAGGTTCCATCTAGGTGTTTGTTTGTGATTTGATTAATGGATGGTATGATATTTAACCTTCAATGCCCTGGCCTTGCAAAAAGCAAGCAGCATATAAGATATAGAACATAGTTGGTTCGCACTAGATTGAAGAAATTTATAAGCAAAATTTTCAGAAAAGTAAGATAATCTTATGCAAGATGGAATGAAAAAAGCACAAGTTCATAGAGGCCAGAGGTCAATTTACTAATAAAAAACTGAAAAACTAGCAAAAGGGACCACTTTATGAGGACTACCACCACATCAATGTGTTTAACATAGAGAAGCAAAGCTAAGTGTTTGGATGCCAGATTTCATATATCTATATAATTTAGCTTCTTAAATAGCAAAGAATAAATAGTTGCAGATAAAGTTTGGGAGATTACTCCTTACCATTCTGGACATTGGAGTTCTT

mRNA sequence

ATGGGAGACAAGAATGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAACGGTGGAAATGCTGACGCATCCAAACCTGCAGCGTCTCCGTTGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTCTCTGAACCATTTGGGTACCTGAAATCTTGGCTTGACTTGGTTGCCAAGCATGAAAGGCGCAGGTCATCAAGTTATGTAATGTCAAATACCCCCTGTTAAAACATGTATTATTTCAAGATTCTCAACAATTCAATATAATGTCACAGTTATATATTTGATACATATGAGATATGATATAAACTATGCAATATGGTCATTTAAATACATACTTAGCACATCCGTCACCAAGTGTCAACTGATTTAATTAATTCTATGGTCTCTATCGGCCAAATCAAACAAACATGTAAGTAATACTTTTCTGAGCGTAAAACTAATTACTGTGACAAGGTTCCATCTAGGTGTTTGTTTGTGATTTGATTAATGGATGGTATGATATTTAACCTTCAATGCCCTGGCCTTGCAAAAAGCAAGCAGCATATAAGATATAGAACATAGTTGGTTCGCACTAGATTGAAGAAATTTATAAGCAAAATTTTCAGAAAAGTAAGATAATCTTATGCAAGATGGAATGAAAAAAGCACAAGTTCATAGAGGCCAGAGGTCAATTTACTAATAAAAAACTGAAAAACTAGCAAAAGGGACCACTTTATGAGGACTACCACCACATCAATGTGTTTAACATAGAGAAGCAAAGCTAAGTGTTTGGATGCCAGATTTCATATATCTATATAATTTAGCTTCTTAAATAGCAAAGAATAAATAGTTGCAGATAAAGTTTGGGAGATTACTCCTTACCATTCTGGACATTGGAGTTCTT

Coding sequence (CDS)

ATGGGAGACAAGAATGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAACGGTGGAAATGCTGACGCATCCAAACCTGCAGCGTCTCCGTTGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTCTCTGAACCATTTGGGTACCTGAAATCTTGGCTTGACTTGGTTGCCAAGCATGAAAGGCGCAGGTCATCAAGTTATGTAATGTCAAATACCCCCTGTTAA

Protein sequence

MGDKNENLFWSIIKSFINCLLGFNGGNADASKPAASPLGPEAAMVAAAKHFSSAHKVLSEPFGYLKSWLDLVAKHERRRSSSYVMSNTPC
Homology
[Close]
BLAST of PI0024133 vs. ExPASy TrEMBL
Match: A0A0A0KT12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606890 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.1e-33
Identity = 75/90 (83.33%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MGDKNENLFWSIIKSFINCLLGFNGGNADASKPAASPLGPEAAMVAAAKHFSSAHKVLSE 60
          MGD+ ENL WSIIKSFINCLLG N GNADAS  A SP GPEAAMVAAAKHFSSAHK    
Sbjct: 1  MGDEKENLCWSIIKSFINCLLGLNDGNADASNAAVSPSGPEAAMVAAAKHFSSAHK---- 60

Query: 61 PFGYLKSWLDLVAKHERRRSSSYVMSNTPC 91
           FGYLKSWLDLV KHERRRSSSYVMSNTPC
Sbjct: 61 -FGYLKSWLDLVVKHERRRSSSYVMSNTPC 85

[Close]
BLAST of PI0024133 vs. NCBI nr
Match: KGN51999.1 (hypothetical protein Csa_008139 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32
Identity = 75/90 (83.33%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MGDKNENLFWSIIKSFINCLLGFNGGNADASKPAASPLGPEAAMVAAAKHFSSAHKVLSE 60
          MGD+ ENL WSIIKSFINCLLG N GNADAS  A SP GPEAAMVAAAKHFSSAHK    
Sbjct: 1  MGDEKENLCWSIIKSFINCLLGLNDGNADASNAAVSPSGPEAAMVAAAKHFSSAHK---- 60

Query: 61 PFGYLKSWLDLVAKHERRRSSSYVMSNTPC 91
           FGYLKSWLDLV KHERRRSSSYVMSNTPC
Sbjct: 61 -FGYLKSWLDLVVKHERRRSSSYVMSNTPC 85

[Close]
BLAST of PI0024133 vs. NCBI nr
Match: KAG6574028.1 (hypothetical protein SDJN03_27915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 74.3 bits (181), Expect = 5.9e-10
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 7  NLFWSIIKSFINCLLGFNGGNADASKPAAS------PLGPEAAMVAAAKHFSSAHKV--L 64
          NL WS +KSFI CLLGFNGG+ +A+  AA+      P GPEAAMVAAAKHFSSAHK+  +
Sbjct: 2  NLIWSTLKSFIYCLLGFNGGSPEAAMAAAAAAAPSPPTGPEAAMVAAAKHFSSAHKLRNV 61

The following BLAST results are available for this feature:
BLAST of PI0024133 vs.
Match NameE-valueIdentityDescription
BLAST of PI0024133 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT129.1e-3383.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606890 PE=4 SV=1[more]
BLAST of PI0024133 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51999.11.9e-3283.33hypothetical protein Csa_008139 [Cucumis sativus][more]
KAG6574028.15.9e-1061.54hypothetical protein SDJN03_27915, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of PI0024133 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024133.1PI0024133.1mRNA